RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 TBC1D8O95759 1140 aa8.06□□□□□ -1.12
TRPM1-204ENST00000557948 SLC10A3P09131 477 aa8.06□□□□□ -1.12
TRPM1-204ENST00000557948 COL9A1P20849 921 aa8.06□□□□□ -1.12
TRPM1-204ENST00000557948 TBC1D9BQ66K14 1250 aa8.06□□□□□ -1.12
TRPM1-204ENST00000557948 DNAJC10Q8IXB1 793 aa8.06□□□□□ -1.12
TRPM1-204ENST00000557948 ZC3H15Q8WU90 426 aaKnown RBP8.06□□□□□ -1.12
TRPM1-204ENST00000557948 PGAP2Q9UHJ9 254 aa8.06□□□□□ -1.12
TRPM1-204ENST00000557948 WASHC2AQ641Q2 1341 aa8.05□□□□□ -1.12
TRPM1-204ENST00000557948 POLR2AP24928 1970 aaKnown RBP8.05□□□□□ -1.12
TRPM1-204ENST00000557948 GPR25O00155 361 aa8.05□□□□□ -1.12
TRPM1-204ENST00000557948 NPR1P16066 1061 aa8.05□□□□□ -1.12
TRPM1-204ENST00000557948 USP48Q86UV5 1035 aa8.05□□□□□ -1.12
TRPM1-204ENST00000557948 PSMD1Q99460 953 aa8.05□□□□□ -1.12
TRPM1-204ENST00000557948 KIF24Q5T7B8 1368 aa8.05□□□□□ -1.12
TRPM1-204ENST00000557948 HTTP42858 3142 aa8.05□□□□□ -1.12
TRPM1-204ENST00000557948 BRCA2P51587 3418 aa8.04□□□□□ -1.12
TRPM1-204ENST00000557948 TULP1O00294 542 aaPredicted RBP8.04□□□□□ -1.12
TRPM1-204ENST00000557948 FKTNO75072 461 aa8.04□□□□□ -1.12
TRPM1-204ENST00000557948 CAMK2BQ13554 666 aa8.04□□□□□ -1.12
TRPM1-204ENST00000557948 NOM1Q5C9Z4 860 aaKnown RBP8.04□□□□□ -1.12
TRPM1-204ENST00000557948 ANKRD13DQ6ZTN6 518 aa8.04□□□□□ -1.12
TRPM1-204ENST00000557948 LARGE2Q8N3Y3 721 aa8.04□□□□□ -1.12
TRPM1-204ENST00000557948 ZBTB1Q9Y2K1 713 aa8.04□□□□□ -1.12
TRPM1-204ENST00000557948 COL4A5P29400 1685 aa8.04□□□□□ -1.12
TRPM1-204ENST00000557948 SCN7AQ01118 1682 aa8.03□□□□□ -1.12
TRPM1-204ENST00000557948 A0A087WZG4 1122 aa8.03□□□□□ -1.12
TRPM1-204ENST00000557948 CYP19A1P11511 503 aaPredicted RBP8.03□□□□□ -1.12
TRPM1-204ENST00000557948 ATN1P54259 1190 aaPredicted RBP8.03□□□□□ -1.12
TRPM1-204ENST00000557948 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRPM1-204ENST00000557948 NIM1KQ8IY84 436 aa8.03□□□□□ -1.12
TRPM1-204ENST00000557948 NFATC2IPQ8NCF5 419 aa8.03□□□□□ -1.12
TRPM1-204ENST00000557948 SETDB2Q96T68 719 aa8.03□□□□□ -1.12
TRPM1-204ENST00000557948 STXBP5LQ9Y2K9 1186 aa8.03□□□□□ -1.12
TRPM1-204ENST00000557948 CANXP27824 592 aaKnown RBP8.02□□□□□ -1.13
TRPM1-204ENST00000557948 PLA2G5P39877 138 aa8.02□□□□□ -1.13
TRPM1-204ENST00000557948 PPP1R15BQ5SWA1 713 aa8.02□□□□□ -1.13
TRPM1-204ENST00000557948 DLK2Q6UY11 383 aa8.02□□□□□ -1.13
TRPM1-204ENST00000557948 FAM122AQ96E09 287 aa8.02□□□□□ -1.13
TRPM1-204ENST00000557948 EYA1Q99502 592 aa8.02□□□□□ -1.13
TRPM1-204ENST00000557948 GPHNQ9NQX3 736 aaPredicted RBP8.02□□□□□ -1.13
TRPM1-204ENST00000557948 TRIM17Q9Y577 477 aa8.02□□□□□ -1.13
TRPM1-204ENST00000557948 ST20-MTHFSA0A0A6YYL1 179 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 SOX1O00570 391 aaPredicted RBP8.01□□□□□ -1.13
TRPM1-204ENST00000557948 PPM1GO15355 546 aaPredicted RBP8.01□□□□□ -1.13
TRPM1-204ENST00000557948 ALDH1B1P30837 517 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 MTHFSP49914 203 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 GMPSP49915 693 aaPredicted RBP8.01□□□□□ -1.13
TRPM1-204ENST00000557948 HIRAP54198 1017 aaPredicted RBP8.01□□□□□ -1.13
TRPM1-204ENST00000557948 KRT26Q7Z3Y9 468 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 RASAL3Q86YV0 1011 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 MICALL2Q8IY33 904 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 DEFB123Q8N688 67 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 PDCD7Q8N8D1 485 aaKnown RBP8.01□□□□□ -1.13
TRPM1-204ENST00000557948 DPF3Q92784 378 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 LRCH3Q96II8 777 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 GGNBP2Q9H3C7 697 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 ARIH1Q9Y4X5 557 aaPredicted RBP8.01□□□□□ -1.13
TRPM1-204ENST00000557948 LAMB4A4D0S4 1761 aa8.01□□□□□ -1.13
TRPM1-204ENST00000557948 ROCK2O75116 1388 aaKnown RBP8□□□□□ -1.13
TRPM1-204ENST00000557948 A0A1W2PPC1 479 aa8□□□□□ -1.13
TRPM1-204ENST00000557948 ZNF530Q6P9A1 599 aaPredicted RBP8□□□□□ -1.13
TRPM1-204ENST00000557948 TRPM4Q8TD43 1214 aa8□□□□□ -1.13
TRPM1-204ENST00000557948 BCL2L13Q9BXK5 485 aa8□□□□□ -1.13
TRPM1-204ENST00000557948 CDHR2Q9BYE9 1310 aa8□□□□□ -1.13
TRPM1-204ENST00000557948 VCANP13611 3396 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 NPC1L1Q9UHC9 1359 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 ZNF316A6NFI3 1004 aaPredicted RBP7.99□□□□□ -1.13
TRPM1-204ENST00000557948 FYB1O15117 783 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 MLLT3P42568 568 aaPredicted RBP7.99□□□□□ -1.13
TRPM1-204ENST00000557948 DSG2Q14126 1118 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 PLEKHO1Q53GL0 409 aaPredicted RBP7.99□□□□□ -1.13
TRPM1-204ENST00000557948 CC2D2BQ6DHV5 1058 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 OTOP1Q7RTM1 612 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 NBPF5PQ86XG9 351 aaPredicted RBP7.99□□□□□ -1.13
TRPM1-204ENST00000557948 ARMC5Q96C12 935 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 PRO3102Q9H379 93 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 TBC1D2BQ9UPU7 963 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 ZNF330Q9Y3S2 320 aaPredicted RBP7.99□□□□□ -1.13
TRPM1-204ENST00000557948 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 ERBB4Q15303 1308 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 KIF20BQ96Q89 1820 aa7.99□□□□□ -1.13
TRPM1-204ENST00000557948 SNED1Q8TER0 1413 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 H7C1D1 291 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 ATMINO43313 823 aaPredicted RBP7.98□□□□□ -1.13
TRPM1-204ENST00000557948 PPIP5K2O43314 1243 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 EIF5P55010 431 aaKnown RBP7.98□□□□□ -1.13
TRPM1-204ENST00000557948 IRX5P78411 483 aaPredicted RBP7.98□□□□□ -1.13
TRPM1-204ENST00000557948 CXCL9Q07325 125 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 SLC4A8Q2Y0W8 1093 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 GRIPAP1Q4V328 841 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 C1orf141Q5JVX7 400 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 GPR153Q6NV75 609 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 NPM2Q86SE8 214 aaKnown RBP7.98□□□□□ -1.13
TRPM1-204ENST00000557948 DCPSQ96C86 337 aaKnown RBP7.98□□□□□ -1.13
TRPM1-204ENST00000557948 SLC24A3Q9HC58 644 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 RAPGEFL1Q9UHV5 662 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 PTPN22Q9Y2R2 807 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 LAMA3Q16787 3333 aa7.98□□□□□ -1.13
TRPM1-204ENST00000557948 RAB3GAP2Q9H2M9 1393 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms