RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 RPGRQ92834 1020 aaKnown RBP11.88□□□□□ -0.51
NPC2-209ENST00000557510 PNNQ9H307 717 aaKnown RBP11.88□□□□□ -0.51
NPC2-209ENST00000557510 IQCA1LA6NCM1 817 aa11.87□□□□□ -0.51
NPC2-209ENST00000557510 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
NPC2-209ENST00000557510 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
NPC2-209ENST00000557510 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
NPC2-209ENST00000557510 EAPPQ56P03 285 aaPredicted RBP11.87□□□□□ -0.51
NPC2-209ENST00000557510 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
NPC2-209ENST00000557510 ZNF428Q96B54 188 aa11.87□□□□□ -0.51
NPC2-209ENST00000557510 PSMD1Q99460 953 aa11.87□□□□□ -0.51
NPC2-209ENST00000557510 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
NPC2-209ENST00000557510 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
NPC2-209ENST00000557510 ITGBL1O95965 494 aaPredicted RBP11.86□□□□□ -0.51
NPC2-209ENST00000557510 EPHX2P34913 555 aa11.86□□□□□ -0.51
NPC2-209ENST00000557510 ZNF579Q8NAF0 562 aaKnown RBP11.86□□□□□ -0.51
NPC2-209ENST00000557510 XAGE3Q8WTP9 111 aa11.86□□□□□ -0.51
NPC2-209ENST00000557510 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
NPC2-209ENST00000557510 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
NPC2-209ENST00000557510 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
NPC2-209ENST00000557510 MYBBP1AQ9BQG0 1328 aaKnown RBP11.86□□□□□ -0.51
NPC2-209ENST00000557510 COL4A1P02462 1669 aa11.85□□□□□ -0.51
NPC2-209ENST00000557510 AIMP1Q12904 312 aaKnown RBP11.85□□□□□ -0.51
NPC2-209ENST00000557510 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
NPC2-209ENST00000557510 MAP1SQ66K74 1059 aaPredicted RBP11.85□□□□□ -0.51
NPC2-209ENST00000557510 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
NPC2-209ENST00000557510 KIF12Q96FN5 646 aa11.85□□□□□ -0.51
NPC2-209ENST00000557510 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
NPC2-209ENST00000557510 CRAMP1Q96RY5 1269 aa11.85□□□□□ -0.51
NPC2-209ENST00000557510 UTP14AQ9BVJ6 771 aaKnown RBP11.85□□□□□ -0.51
NPC2-209ENST00000557510 CHL1O00533 1208 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 MAP3K13O43283 966 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
NPC2-209ENST00000557510 PARP10Q53GL7 1025 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 SLC10A5Q5PT55 438 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 CC2D2BQ6DHV5 1058 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 GPC2Q8N158 579 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 BABAM1Q9NWV8 329 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
NPC2-209ENST00000557510 GJA3Q9Y6H8 435 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 ABCC4O15439 1325 aa11.84□□□□□ -0.51
NPC2-209ENST00000557510 CNTNAP1P78357 1384 aa11.83□□□□□ -0.52
NPC2-209ENST00000557510 SCNN1DP51172 638 aa11.83□□□□□ -0.52
NPC2-209ENST00000557510 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.52
NPC2-209ENST00000557510 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
NPC2-209ENST00000557510 LARGE2Q8N3Y3 721 aa11.83□□□□□ -0.52
NPC2-209ENST00000557510 JDP2Q8WYK2 163 aa11.83□□□□□ -0.52
NPC2-209ENST00000557510 CHPF2Q9P2E5 772 aa11.83□□□□□ -0.52
NPC2-209ENST00000557510 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
NPC2-209ENST00000557510 EPS15P42566 896 aa11.82□□□□□ -0.52
NPC2-209ENST00000557510 AOC3Q16853 763 aa11.82□□□□□ -0.52
NPC2-209ENST00000557510 CNTROBQ8N137 903 aa11.82□□□□□ -0.52
NPC2-209ENST00000557510 RUNDC1Q96C34 613 aa11.82□□□□□ -0.52
NPC2-209ENST00000557510 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
NPC2-209ENST00000557510 DDX21Q9NR30 783 aaKnown RBP eCLIP11.82□□□□□ -0.52
NPC2-209ENST00000557510 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
NPC2-209ENST00000557510 DUOX1Q9NRD9 1551 aa11.82□□□□□ -0.52
NPC2-209ENST00000557510 TRPM7Q96QT4 1865 aa11.81□□□□□ -0.52
NPC2-209ENST00000557510 LRRC37AA6NMS7 1700 aa11.81□□□□□ -0.52
NPC2-209ENST00000557510 PPIP5K2O43314 1243 aa11.81□□□□□ -0.52
NPC2-209ENST00000557510 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
NPC2-209ENST00000557510 VEGFBP49765 207 aa11.81□□□□□ -0.52
NPC2-209ENST00000557510 PSEN1P49768 467 aa11.81□□□□□ -0.52
NPC2-209ENST00000557510 EIF6P56537 245 aaKnown RBP11.81□□□□□ -0.52
NPC2-209ENST00000557510 TCIRG1Q13488 830 aa11.81□□□□□ -0.52
NPC2-209ENST00000557510 TNS4Q8IZW8 715 aa11.81□□□□□ -0.52
NPC2-209ENST00000557510 TMEM88BA6NKF7 163 aa11.8□□□□□ -0.52
NPC2-209ENST00000557510 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
NPC2-209ENST00000557510 PNMA8AQ86V59 439 aaPredicted RBP11.8□□□□□ -0.52
NPC2-209ENST00000557510 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
NPC2-209ENST00000557510 TRMT112Q9UI30 125 aaKnown RBP11.8□□□□□ -0.52
NPC2-209ENST00000557510 SH3TC1Q8TE82 1336 aa11.8□□□□□ -0.52
NPC2-209ENST00000557510 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
NPC2-209ENST00000557510 FOXN1O15353 648 aa11.79□□□□□ -0.52
NPC2-209ENST00000557510 HSP90AB3PQ58FF7 597 aa11.79□□□□□ -0.52
NPC2-209ENST00000557510 HDGFL1Q5TGJ6 251 aa11.79□□□□□ -0.52
NPC2-209ENST00000557510 YTHDC1Q96MU7 727 aaKnown RBP11.79□□□□□ -0.52
NPC2-209ENST00000557510 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
NPC2-209ENST00000557510 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
NPC2-209ENST00000557510 TRAF5O00463 557 aa11.78□□□□□ -0.52
NPC2-209ENST00000557510 CXCL9Q07325 125 aa11.78□□□□□ -0.52
NPC2-209ENST00000557510 GRIPAP1Q4V328 841 aa11.78□□□□□ -0.52
NPC2-209ENST00000557510 DUSP27Q5VZP5 1158 aa11.78□□□□□ -0.52
NPC2-209ENST00000557510 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
NPC2-209ENST00000557510 ISCA1Q9BUE6 129 aa11.78□□□□□ -0.52
NPC2-209ENST00000557510 RTFDC1Q9BY42 306 aaPredicted RBP11.78□□□□□ -0.52
NPC2-209ENST00000557510 POLR2AP24928 1970 aaKnown RBP11.78□□□□□ -0.52
NPC2-209ENST00000557510 SHTN1A0MZ66 631 aa11.77□□□□□ -0.53
NPC2-209ENST00000557510 BBOX1O75936 387 aa11.77□□□□□ -0.53
NPC2-209ENST00000557510 ZNF853P0CG23 659 aa11.77□□□□□ -0.53
NPC2-209ENST00000557510 LMOD1P29536 600 aaPredicted RBP11.77□□□□□ -0.53
NPC2-209ENST00000557510 GRAPQ13588 217 aa11.77□□□□□ -0.53
NPC2-209ENST00000557510 RTL5Q5HYW3 569 aaPredicted RBP11.77□□□□□ -0.53
NPC2-209ENST00000557510 DPP8Q6V1X1 898 aaPredicted RBP11.77□□□□□ -0.53
NPC2-209ENST00000557510 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.53
NPC2-209ENST00000557510 MPNDQ8N594 471 aa11.77□□□□□ -0.53
NPC2-209ENST00000557510 PLBD2Q8NHP8 589 aa11.77□□□□□ -0.53
NPC2-209ENST00000557510 GRAPLQ8TC17 118 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms