RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 C8orf86Q6ZUL3 223 aa8.09□□□□□ -1.11
ATXN3-246ENST00000557030 ZNF417Q8TAU3 575 aa8.09□□□□□ -1.11
ATXN3-246ENST00000557030 TRPM4Q8TD43 1214 aa8.09□□□□□ -1.11
ATXN3-246ENST00000557030 ZNF587Q96SQ5 575 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-246ENST00000557030 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
ATXN3-246ENST00000557030 STIM2Q9P246 746 aa8.09□□□□□ -1.11
ATXN3-246ENST00000557030 NAGPAQ9UK23 515 aa8.09□□□□□ -1.11
ATXN3-246ENST00000557030 ZBTB39O15060 712 aa8.08□□□□□ -1.12
ATXN3-246ENST00000557030 IGHA1P01876 353 aa8.08□□□□□ -1.12
ATXN3-246ENST00000557030 SCNN1AP37088 669 aa8.08□□□□□ -1.12
ATXN3-246ENST00000557030 TRIP4Q15650 581 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-246ENST00000557030 UBE2OQ9C0C9 1292 aaKnown RBP8.08□□□□□ -1.12
ATXN3-246ENST00000557030 NOP53Q9NZM5 478 aaKnown RBP8.08□□□□□ -1.12
ATXN3-246ENST00000557030 SASH3O75995 380 aa8.07□□□□□ -1.12
ATXN3-246ENST00000557030 PROCP04070 461 aa8.07□□□□□ -1.12
ATXN3-246ENST00000557030 HOXD8P13378 290 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-246ENST00000557030 DHX32Q7L7V1 743 aaKnown RBP8.07□□□□□ -1.12
ATXN3-246ENST00000557030 RGL4Q8IZJ4 473 aa8.07□□□□□ -1.12
ATXN3-246ENST00000557030 PNMA5Q96PV4 448 aa8.07□□□□□ -1.12
ATXN3-246ENST00000557030 PLVAPQ9BX97 442 aa8.07□□□□□ -1.12
ATXN3-246ENST00000557030 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
ATXN3-246ENST00000557030 XYLBO75191 536 aa8.06□□□□□ -1.12
ATXN3-246ENST00000557030 ZAP70P43403 619 aa8.05□□□□□ -1.12
ATXN3-246ENST00000557030 GPLD1P80108 840 aa8.05□□□□□ -1.12
ATXN3-246ENST00000557030 GPAT2Q6NUI2 795 aa8.05□□□□□ -1.12
ATXN3-246ENST00000557030 KRT25Q7Z3Z0 450 aa8.05□□□□□ -1.12
ATXN3-246ENST00000557030 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
ATXN3-246ENST00000557030 HELQQ8TDG4 1101 aa8.05□□□□□ -1.12
ATXN3-246ENST00000557030 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
ATXN3-246ENST00000557030 TLR7Q9NYK1 1049 aaKnown RBP8.05□□□□□ -1.12
ATXN3-246ENST00000557030 RARAP10276 462 aa8.04□□□□□ -1.12
ATXN3-246ENST00000557030 NRLP54845 237 aa8.04□□□□□ -1.12
ATXN3-246ENST00000557030 GRIK5Q16478 980 aa8.04□□□□□ -1.12
ATXN3-246ENST00000557030 PCSK7Q16549 785 aa8.04□□□□□ -1.12
ATXN3-246ENST00000557030 SPOCK3Q9BQ16 436 aa8.04□□□□□ -1.12
ATXN3-246ENST00000557030 FRRS1LQ9P0K9 344 aa8.04□□□□□ -1.12
ATXN3-246ENST00000557030 USTQ9Y2C2 406 aa8.04□□□□□ -1.12
ATXN3-246ENST00000557030 LILRB5O75023 590 aa8.03□□□□□ -1.12
ATXN3-246ENST00000557030 NPR3P17342 541 aa8.03□□□□□ -1.12
ATXN3-246ENST00000557030 SOX18P35713 384 aa8.03□□□□□ -1.12
ATXN3-246ENST00000557030 AFF1P51825 1210 aaKnown RBP8.03□□□□□ -1.12
ATXN3-246ENST00000557030 PSAPL1Q6NUJ1 521 aa8.03□□□□□ -1.12
ATXN3-246ENST00000557030 ABTB2Q8N961 1025 aa8.03□□□□□ -1.12
ATXN3-246ENST00000557030 TTC9Q92623 222 aa8.03□□□□□ -1.12
ATXN3-246ENST00000557030 IGFLR1Q9H665 355 aa8.03□□□□□ -1.12
ATXN3-246ENST00000557030 FAM13BQ9NYF5 915 aa8.03□□□□□ -1.12
ATXN3-246ENST00000557030 MMP20O60882 483 aa8.02□□□□□ -1.13
ATXN3-246ENST00000557030 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
ATXN3-246ENST00000557030 CD163Q86VB7 1156 aa8.02□□□□□ -1.13
ATXN3-246ENST00000557030 PIK3R5Q8WYR1 880 aa8.02□□□□□ -1.13
ATXN3-246ENST00000557030 CCDC180Q9P1Z9 1646 aa8.02□□□□□ -1.13
ATXN3-246ENST00000557030 C1QTNF9BB2RNN3 333 aa8.01□□□□□ -1.13
ATXN3-246ENST00000557030 CHRNA4P43681 627 aa8.01□□□□□ -1.13
ATXN3-246ENST00000557030 TBC1D8BQ0IIM8 1120 aa8.01□□□□□ -1.13
ATXN3-246ENST00000557030 PERM1Q5SV97 790 aa8.01□□□□□ -1.13
ATXN3-246ENST00000557030 FAM35AQ86V20 835 aa8.01□□□□□ -1.13
ATXN3-246ENST00000557030 NLRP13Q86W25 1043 aa8.01□□□□□ -1.13
ATXN3-246ENST00000557030 GTF3C2Q8WUA4 911 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-246ENST00000557030 MSTNO14793 375 aa8□□□□□ -1.13
ATXN3-246ENST00000557030 PLAURQ03405 335 aa8□□□□□ -1.13
ATXN3-246ENST00000557030 GPR152Q8TDT2 470 aa8□□□□□ -1.13
ATXN3-246ENST00000557030 NUDT8Q8WV74 236 aa8□□□□□ -1.13
ATXN3-246ENST00000557030 JPH1Q9HDC5 661 aaPredicted RBP8□□□□□ -1.13
ATXN3-246ENST00000557030 SPDYE3A6NKU9 549 aa7.99□□□□□ -1.13
ATXN3-246ENST00000557030 CPB1P15086 417 aa7.99□□□□□ -1.13
ATXN3-246ENST00000557030 ATCAYQ86WG3 371 aa7.99□□□□□ -1.13
ATXN3-246ENST00000557030 OR13H1Q8NG92 308 aa7.99□□□□□ -1.13
ATXN3-246ENST00000557030 UBAP1LF5GYI3 381 aa7.98□□□□□ -1.13
ATXN3-246ENST00000557030 RGS9O75916 674 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-246ENST00000557030 MLLT1Q03111 559 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-246ENST00000557030 XKR5Q6UX68 686 aa7.98□□□□□ -1.13
ATXN3-246ENST00000557030 A0A0A0MRY4 1105 aa7.97□□□□□ -1.13
ATXN3-246ENST00000557030 LOC102724428A0A0B4J2F2 783 aa7.97□□□□□ -1.13
ATXN3-246ENST00000557030 PSAPP07602 524 aa7.97□□□□□ -1.13
ATXN3-246ENST00000557030 MPSTP25325 297 aa7.97□□□□□ -1.13
ATXN3-246ENST00000557030 EIF1AXP47813 144 aaKnown RBP7.97□□□□□ -1.13
ATXN3-246ENST00000557030 SIK1P57059 783 aa7.97□□□□□ -1.13
ATXN3-246ENST00000557030 PDE12Q6L8Q7 609 aaKnown RBP7.97□□□□□ -1.13
ATXN3-246ENST00000557030 FNDC3AQ9Y2H6 1198 aaKnown RBP7.97□□□□□ -1.13
ATXN3-246ENST00000557030 FAM229AH3BQW9 127 aa7.96□□□□□ -1.14
ATXN3-246ENST00000557030 KIF4AO95239 1232 aa7.96□□□□□ -1.14
ATXN3-246ENST00000557030 ARID4AP29374 1257 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-246ENST00000557030 MTMR3Q13615 1198 aa7.96□□□□□ -1.14
ATXN3-246ENST00000557030 ECM1Q16610 540 aa7.96□□□□□ -1.14
ATXN3-246ENST00000557030 NOM1Q5C9Z4 860 aaKnown RBP7.96□□□□□ -1.14
ATXN3-246ENST00000557030 COL13A1Q5TAT6 717 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-246ENST00000557030 MSL1Q68DK7 614 aa7.96□□□□□ -1.14
ATXN3-246ENST00000557030 HFE2Q6ZVN8 426 aa7.96□□□□□ -1.14
ATXN3-246ENST00000557030 NUDT16Q96DE0 195 aaKnown RBP7.96□□□□□ -1.14
ATXN3-246ENST00000557030 J3QW42 95 aa7.95□□□□□ -1.14
ATXN3-246ENST00000557030 PDGFAP04085 211 aa7.95□□□□□ -1.14
ATXN3-246ENST00000557030 BAG6P46379 1132 aa7.95□□□□□ -1.14
ATXN3-246ENST00000557030 TRIM28Q13263 835 aaKnown RBP7.95□□□□□ -1.14
ATXN3-246ENST00000557030 PRRT3Q5FWE3 981 aa7.95□□□□□ -1.14
ATXN3-246ENST00000557030 GGNBP2Q9H3C7 697 aa7.95□□□□□ -1.14
ATXN3-246ENST00000557030 MZF1P28698 734 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-246ENST00000557030 FKBP4Q02790 459 aaKnown RBP eCLIP7.94□□□□□ -1.14
ATXN3-246ENST00000557030 SF3B2Q13435 895 aaKnown RBP7.94□□□□□ -1.14
ATXN3-246ENST00000557030 TRAPPC3LQ5T215 181 aa7.94□□□□□ -1.14
ATXN3-246ENST00000557030 ELMSAN1Q6PJG2 1045 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms