RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ZNF397Q8NF99 534 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 CEP131Q9UPN4 1083 aa17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 UHRF1BP1LA0JNW5 1464 aa17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 CBX8Q9HC52 389 aa17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 SNRKQ9NRH2 765 aa17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 DNAI1Q9UI46 699 aa17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 LINS1Q8NG48 757 aa17.41■□□□□ 0.38
ARHGEF40-207ENST00000556399 KCNG4Q8TDN1 519 aa17.41■□□□□ 0.38
ARHGEF40-207ENST00000556399 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
ARHGEF40-207ENST00000556399 U2AF2P26368 475 aaKnown RBP eCLIP17.41■□□□□ 0.38
ARHGEF40-207ENST00000556399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF40-207ENST00000556399 H0YHG0 523 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 UBASH3AP57075 661 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 GNG11P61952 73 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 SLC27A2O14975 620 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 RPS6KB1P23443 525 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 CPLX3Q8WVH0 158 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 SYKP43405 635 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 STIM1Q13586 685 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 JAKMIP3Q5VZ66 844 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 ANKRD13DQ6ZTN6 518 aa17.4■□□□□ 0.38
ARHGEF40-207ENST00000556399 KLF18A0A0U1RQI7 1052 aa17.39■□□□□ 0.38
ARHGEF40-207ENST00000556399 CCDC82Q8N4S0 544 aa17.39■□□□□ 0.38
ARHGEF40-207ENST00000556399 CLSTN2Q9H4D0 955 aa17.39■□□□□ 0.38
ARHGEF40-207ENST00000556399 ZNF75DP51815 510 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 CEP89Q96ST8 783 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 GBP3Q9H0R5 595 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 GOLGA6L9A6NEM1 432 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 TOM1L2Q6ZVM7 507 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 BCL2L12Q9HB09 334 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 RGS12O14924 1447 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 PTPDC1A2A3K4 754 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 NBPF7P0C2Y1 421 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 CCDC102BQ68D86 513 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 CDC37L1Q7L3B6 337 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 FAM227BQ96M60 508 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 POGZQ7Z3K3 1410 aa17.39■□□□□ 0.37
ARHGEF40-207ENST00000556399 GOLGA8AA7E2F4 631 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 FAM193AP78312 1265 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 ANKLE2Q86XL3 938 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 UNC13BO14795 1591 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 CEBPAP49715 358 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 COPS6Q7L5N1 327 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 NCOA7Q8NI08 942 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 CCDC144CPQ8IYA2 1237 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 LEO1Q8WVC0 666 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 OSBPL3Q9H4L5 887 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 SLC12A7Q9Y666 1083 aa17.38■□□□□ 0.37
ARHGEF40-207ENST00000556399 MPHOSPH8Q99549 860 aa17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 ZNF853P0CG23 659 aa17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 NAPBQ9H115 298 aa17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 MICU3Q86XE3 530 aa17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 TIGD1Q96MW7 591 aa17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 BICC1Q9H694 974 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 TNRQ92752 1358 aa17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 SSRP1Q08945 709 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 NSFL1CQ9UNZ2 370 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-207ENST00000556399 RAD21O60216 631 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 METAP2P50579 478 aaKnown RBP eCLIP17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 CCDC148Q8NFR7 591 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 ZSWIM4Q9H7M6 989 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 IFNKQ9P0W0 207 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 SPTLC2O15270 562 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 SYT10Q6XYQ8 523 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 FAM135BQ49AJ0 1406 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 MARCKSP29966 332 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 HOXC9P31274 260 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 CUL4AQ13619 759 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 DHX32Q7L7V1 743 aaKnown RBP17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 ANKRD24Q8TF21 1146 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 USP44Q9H0E7 712 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 DEF6Q9H4E7 631 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 HSP90AA4PQ58FG1 418 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 CCDC181Q5TID7 509 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 CCDC12Q8WUD4 166 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 ZBTB3Q9H5J0 574 aa17.36■□□□□ 0.37
ARHGEF40-207ENST00000556399 IFIT3O14879 490 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 IFIT5Q13325 482 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 SLC39A6Q13433 755 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 ME3Q16798 604 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 KIAA1328Q86T90 577 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 EPS15P42566 896 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 TSPYL1Q9H0U9 437 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 SSH3Q8TE77 659 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 MTMR6Q9Y217 621 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 CLTCL1P53675 1640 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 MADDQ8WXG6 1647 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 KIF1BO60333 1816 aa17.35■□□□□ 0.37
ARHGEF40-207ENST00000556399 CDR1P51861 262 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms