RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TECPR2O15040 1411 aa7.21□□□□□ -1.25
ATXN3-239ENST00000556315 KCNQ2O43526 872 aa7.21□□□□□ -1.26
ATXN3-239ENST00000556315 ARHGEF15O94989 841 aa7.21□□□□□ -1.26
ATXN3-239ENST00000556315 FBXO45P0C2W1 286 aa7.21□□□□□ -1.26
ATXN3-239ENST00000556315 MCM6Q14566 821 aa7.21□□□□□ -1.26
ATXN3-239ENST00000556315 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.26
ATXN3-239ENST00000556315 WHAMMQ8TF30 809 aa7.21□□□□□ -1.26
ATXN3-239ENST00000556315 SPON1Q9HCB6 807 aa7.21□□□□□ -1.26
ATXN3-239ENST00000556315 CYLDQ9NQC7 956 aa7.21□□□□□ -1.26
ATXN3-239ENST00000556315 PARD3Q8TEW0 1356 aa7.2□□□□□ -1.26
ATXN3-239ENST00000556315 CDC42BPGQ6DT37 1551 aa7.2□□□□□ -1.26
ATXN3-239ENST00000556315 GIGYF1O75420 1035 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-239ENST00000556315 PDE3BQ13370 1112 aa7.2□□□□□ -1.26
ATXN3-239ENST00000556315 C14orf93Q9H972 538 aaKnown RBP7.2□□□□□ -1.26
ATXN3-239ENST00000556315 TIMELESSQ9UNS1 1208 aa7.2□□□□□ -1.26
ATXN3-239ENST00000556315 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
ATXN3-239ENST00000556315 SPHKAPQ2M3C7 1700 aa7.19□□□□□ -1.26
ATXN3-239ENST00000556315 RNF225M0QZC1 329 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-239ENST00000556315 GPC1P35052 558 aa7.19□□□□□ -1.26
ATXN3-239ENST00000556315 RASSF7Q02833 373 aa7.19□□□□□ -1.26
ATXN3-239ENST00000556315 SVOPQ8N4V2 548 aa7.19□□□□□ -1.26
ATXN3-239ENST00000556315 PRM3Q9NNZ6 103 aa7.19□□□□□ -1.26
ATXN3-239ENST00000556315 PRDM11Q9NQV5 511 aa7.19□□□□□ -1.26
ATXN3-239ENST00000556315 CUEDC1Q9NWM3 386 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-239ENST00000556315 GPRASP1Q5JY77 1395 aa7.19□□□□□ -1.26
ATXN3-239ENST00000556315 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.18□□□□□ -1.26
ATXN3-239ENST00000556315 ATP5J2-PTCD1G3V325 749 aa7.18□□□□□ -1.26
ATXN3-239ENST00000556315 ERVK-9P63128 1117 aa7.18□□□□□ -1.26
ATXN3-239ENST00000556315 TMEM151AQ8N4L1 468 aa7.18□□□□□ -1.26
ATXN3-239ENST00000556315 PRAM1Q96QH2 718 aa7.18□□□□□ -1.26
ATXN3-239ENST00000556315 POGKQ9P215 609 aa7.18□□□□□ -1.26
ATXN3-239ENST00000556315 PCDHB9Q9Y5E1 797 aa7.18□□□□□ -1.26
ATXN3-239ENST00000556315 CLTCL1P53675 1640 aa7.18□□□□□ -1.26
ATXN3-239ENST00000556315 USP32Q8NFA0 1604 aa7.18□□□□□ -1.26
ATXN3-239ENST00000556315 SPATA31A1Q5TZJ5 1347 aa7.18□□□□□ -1.26
ATXN3-239ENST00000556315 DHX57Q6P158 1386 aaKnown RBP7.18□□□□□ -1.26
ATXN3-239ENST00000556315 YTHDC2Q9H6S0 1430 aaKnown RBP7.18□□□□□ -1.26
ATXN3-239ENST00000556315 GDF11O95390 407 aa7.17□□□□□ -1.26
ATXN3-239ENST00000556315 EVA1CP58658 441 aa7.17□□□□□ -1.26
ATXN3-239ENST00000556315 MCCD1P59942 119 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-239ENST00000556315 SRSF11Q05519 484 aaKnown RBP7.17□□□□□ -1.26
ATXN3-239ENST00000556315 SAFB2Q14151 953 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-239ENST00000556315 GAS6Q14393 721 aa7.17□□□□□ -1.26
ATXN3-239ENST00000556315 PRICKLE2Q7Z3G6 844 aa7.17□□□□□ -1.26
ATXN3-239ENST00000556315 KCTD17Q8N5Z5 321 aa7.17□□□□□ -1.26
ATXN3-239ENST00000556315 GMCL1Q96IK5 515 aa7.17□□□□□ -1.26
ATXN3-239ENST00000556315 SNRKQ9NRH2 765 aa7.17□□□□□ -1.26
ATXN3-239ENST00000556315 NINLQ9Y2I6 1382 aa7.17□□□□□ -1.26
ATXN3-239ENST00000556315 RRBP1Q9P2E9 1410 aaKnown RBP7.17□□□□□ -1.26
ATXN3-239ENST00000556315 NRXN1Q9ULB1 1477 aa7.17□□□□□ -1.26
ATXN3-239ENST00000556315 A0A1W2PRU2 124 aa7.16□□□□□ -1.26
ATXN3-239ENST00000556315 RAD21O60216 631 aa7.16□□□□□ -1.26
ATXN3-239ENST00000556315 GPR37L1O60883 481 aa7.16□□□□□ -1.26
ATXN3-239ENST00000556315 NR1H3Q13133 447 aa7.16□□□□□ -1.26
ATXN3-239ENST00000556315 CFAP70Q5T0N1 1121 aa7.16□□□□□ -1.26
ATXN3-239ENST00000556315 RNF20Q5VTR2 975 aa7.16□□□□□ -1.26
ATXN3-239ENST00000556315 CC2D2BQ6DHV5 1058 aa7.16□□□□□ -1.26
ATXN3-239ENST00000556315 PPARGC1BQ86YN6 1023 aaKnown RBP7.16□□□□□ -1.26
ATXN3-239ENST00000556315 MTMR14Q8NCE2 650 aa7.16□□□□□ -1.26
ATXN3-239ENST00000556315 NGDNQ8NEJ9 315 aaKnown RBP7.16□□□□□ -1.26
ATXN3-239ENST00000556315 STRN4Q9NRL3 753 aa7.16□□□□□ -1.26
ATXN3-239ENST00000556315 ACIN1Q9UKV3 1341 aaKnown RBP7.16□□□□□ -1.26
ATXN3-239ENST00000556315 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.26
ATXN3-239ENST00000556315 RHOQP17081 205 aa7.15□□□□□ -1.26
ATXN3-239ENST00000556315 CHRNA2Q15822 529 aa7.15□□□□□ -1.26
ATXN3-239ENST00000556315 LYPD4Q6UWN0 246 aa7.15□□□□□ -1.26
ATXN3-239ENST00000556315 TRIM22Q8IYM9 498 aa7.15□□□□□ -1.26
ATXN3-239ENST00000556315 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.26
ATXN3-239ENST00000556315 ZNF837Q96EG3 531 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-239ENST00000556315 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.26
ATXN3-239ENST00000556315 ZMYND15Q9H091 742 aa7.15□□□□□ -1.26
ATXN3-239ENST00000556315 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
ATXN3-239ENST00000556315 ANKARQ7Z5J8 1434 aa7.15□□□□□ -1.27
ATXN3-239ENST00000556315 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.27
ATXN3-239ENST00000556315 BRWD3Q6RI45 1802 aa7.15□□□□□ -1.27
ATXN3-239ENST00000556315 WASLO00401 505 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-239ENST00000556315 PLSCR1O15162 318 aa7.14□□□□□ -1.27
ATXN3-239ENST00000556315 C1QTNF8P60827 252 aa7.14□□□□□ -1.27
ATXN3-239ENST00000556315 ZC3H6P61129 1189 aaKnown RBP7.14□□□□□ -1.27
ATXN3-239ENST00000556315 SPATA31E1Q6ZUB1 1445 aa7.14□□□□□ -1.27
ATXN3-239ENST00000556315 MPHOSPH9Q99550 1183 aa7.14□□□□□ -1.27
ATXN3-239ENST00000556315 THRAP3Q9Y2W1 955 aaKnown RBP7.14□□□□□ -1.27
ATXN3-239ENST00000556315 DYRK1BQ9Y463 629 aa7.14□□□□□ -1.27
ATXN3-239ENST00000556315 NWD2Q9ULI1 1742 aa7.13□□□□□ -1.27
ATXN3-239ENST00000556315 KIF1AQ12756 1690 aa7.13□□□□□ -1.27
ATXN3-239ENST00000556315 PIK3C2GO75747 1445 aa7.13□□□□□ -1.27
ATXN3-239ENST00000556315 EIF3AQ14152 1382 aaKnown RBP7.13□□□□□ -1.27
ATXN3-239ENST00000556315 KIAA0232Q92628 1395 aa7.13□□□□□ -1.27
ATXN3-239ENST00000556315 MEN1O00255 615 aa7.13□□□□□ -1.27
ATXN3-239ENST00000556315 TRAK2O60296 914 aa7.13□□□□□ -1.27
ATXN3-239ENST00000556315 CLN3Q13286 438 aa7.13□□□□□ -1.27
ATXN3-239ENST00000556315 ZNF592Q92610 1267 aa7.13□□□□□ -1.27
ATXN3-239ENST00000556315 HIRIP3Q9BW71 556 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-239ENST00000556315 GRIP2Q9C0E4 1043 aa7.13□□□□□ -1.27
ATXN3-239ENST00000556315 PRR36Q9H6K5 1346 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 A6NJR5 290 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 CELA2BP08218 269 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-239ENST00000556315 SCTRP47872 440 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 DBN1Q16643 649 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 WDR44Q5JSH3 913 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms