RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 MEIOBQ8N635 442 aa12.96□□□□□ -0.33
GTF2A1-204ENST00000556268 ZFP42Q96MM3 310 aa12.96□□□□□ -0.33
GTF2A1-204ENST00000556268 ESPNB1AK53 854 aa12.95□□□□□ -0.34
GTF2A1-204ENST00000556268 DHX9Q08211 1270 aaKnown RBP12.95□□□□□ -0.34
GTF2A1-204ENST00000556268 PURBQ96QR8 312 aaKnown RBP12.95□□□□□ -0.34
GTF2A1-204ENST00000556268 PRM3Q9NNZ6 103 aa12.95□□□□□ -0.34
GTF2A1-204ENST00000556268 PGPEP1Q9NXJ5 209 aa12.95□□□□□ -0.34
GTF2A1-204ENST00000556268 USP35Q9P2H5 1018 aa12.95□□□□□ -0.34
GTF2A1-204ENST00000556268 CAMTA1Q9Y6Y1 1673 aa12.95□□□□□ -0.34
GTF2A1-204ENST00000556268 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
GTF2A1-204ENST00000556268 BRD4O60885 1362 aaPredicted RBP12.94□□□□□ -0.34
GTF2A1-204ENST00000556268 ZNF775Q96BV0 537 aaPredicted RBP12.94□□□□□ -0.34
GTF2A1-204ENST00000556268 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
GTF2A1-204ENST00000556268 IRF5Q13568 498 aa12.93□□□□□ -0.34
GTF2A1-204ENST00000556268 SCARF1Q14162 830 aa12.93□□□□□ -0.34
GTF2A1-204ENST00000556268 GDPD2Q9HCC8 539 aa12.93□□□□□ -0.34
GTF2A1-204ENST00000556268 CBLBQ13191 982 aa12.92□□□□□ -0.34
GTF2A1-204ENST00000556268 LINC00528Q8N1L1 170 aa12.92□□□□□ -0.34
GTF2A1-204ENST00000556268 ARHGEF28Q8N1W1 1705 aaKnown RBP12.92□□□□□ -0.34
GTF2A1-204ENST00000556268 TMPRSS4Q9NRS4 437 aa12.92□□□□□ -0.34
GTF2A1-204ENST00000556268 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
GTF2A1-204ENST00000556268 ERVH48-1M5A8F1 160 aa12.91□□□□□ -0.34
GTF2A1-204ENST00000556268 PLSCR1O15162 318 aa12.91□□□□□ -0.34
GTF2A1-204ENST00000556268 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
GTF2A1-204ENST00000556268 C6orf118Q5T5N4 469 aa12.91□□□□□ -0.34
GTF2A1-204ENST00000556268 ZNF330Q9Y3S2 320 aaPredicted RBP12.91□□□□□ -0.34
GTF2A1-204ENST00000556268 CENPJQ9HC77 1338 aaPredicted RBP12.9□□□□□ -0.34
GTF2A1-204ENST00000556268 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
GTF2A1-204ENST00000556268 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
GTF2A1-204ENST00000556268 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
GTF2A1-204ENST00000556268 ITSN1Q15811 1721 aa12.9□□□□□ -0.34
GTF2A1-204ENST00000556268 TNS1Q9HBL0 1735 aaKnown RBP12.9□□□□□ -0.34
GTF2A1-204ENST00000556268 ABL2P42684 1182 aa12.89□□□□□ -0.35
GTF2A1-204ENST00000556268 PPIP5K1Q6PFW1 1433 aa12.88□□□□□ -0.35
GTF2A1-204ENST00000556268 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
GTF2A1-204ENST00000556268 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
GTF2A1-204ENST00000556268 UPP2O95045 317 aa12.88□□□□□ -0.35
GTF2A1-204ENST00000556268 BMP2P12643 396 aa12.88□□□□□ -0.35
GTF2A1-204ENST00000556268 Q6ZVU0 165 aa12.88□□□□□ -0.35
GTF2A1-204ENST00000556268 LMO7Q8WWI1 1683 aa12.88□□□□□ -0.35
GTF2A1-204ENST00000556268 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
GTF2A1-204ENST00000556268 COL5A2P05997 1499 aaPredicted RBP12.87□□□□□ -0.35
GTF2A1-204ENST00000556268 ZNF592Q92610 1267 aa12.87□□□□□ -0.35
GTF2A1-204ENST00000556268 CRB1P82279 1406 aa12.87□□□□□ -0.35
GTF2A1-204ENST00000556268 KCNQ2O43526 872 aa12.86□□□□□ -0.35
GTF2A1-204ENST00000556268 MCCD1P59942 119 aaPredicted RBP12.86□□□□□ -0.35
GTF2A1-204ENST00000556268 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
GTF2A1-204ENST00000556268 L3MBTL2Q969R5 705 aa12.86□□□□□ -0.35
GTF2A1-204ENST00000556268 TSEN34Q9BSV6 310 aaKnown RBP12.86□□□□□ -0.35
GTF2A1-204ENST00000556268 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
GTF2A1-204ENST00000556268 NRKQ7Z2Y5 1582 aa12.86□□□□□ -0.35
GTF2A1-204ENST00000556268 VAC14Q08AM6 782 aa12.85□□□□□ -0.35
GTF2A1-204ENST00000556268 DDB1Q16531 1140 aa12.85□□□□□ -0.35
GTF2A1-204ENST00000556268 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
GTF2A1-204ENST00000556268 USP6P35125 1406 aa12.85□□□□□ -0.35
GTF2A1-204ENST00000556268 LILRA1O75019 489 aa12.84□□□□□ -0.35
GTF2A1-204ENST00000556268 PTF1AQ7RTS3 328 aa12.84□□□□□ -0.35
GTF2A1-204ENST00000556268 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
GTF2A1-204ENST00000556268 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
GTF2A1-204ENST00000556268 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
GTF2A1-204ENST00000556268 BCL9O00512 1426 aa12.84□□□□□ -0.35
GTF2A1-204ENST00000556268 TOM1L2Q6ZVM7 507 aa12.83□□□□□ -0.36
GTF2A1-204ENST00000556268 POM121Q96HA1 1249 aa12.83□□□□□ -0.36
GTF2A1-204ENST00000556268 CARD10Q9BWT7 1032 aa12.83□□□□□ -0.36
GTF2A1-204ENST00000556268 CYLDQ9NQC7 956 aa12.83□□□□□ -0.36
GTF2A1-204ENST00000556268 TTC21BQ7Z4L5 1316 aa12.83□□□□□ -0.36
GTF2A1-204ENST00000556268 EVC2Q86UK5 1308 aa12.83□□□□□ -0.36
GTF2A1-204ENST00000556268 WDR17Q8IZU2 1322 aa12.83□□□□□ -0.36
GTF2A1-204ENST00000556268 SOBPA7XYQ1 873 aa12.82□□□□□ -0.36
GTF2A1-204ENST00000556268 FLIIQ13045 1269 aa12.82□□□□□ -0.36
GTF2A1-204ENST00000556268 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
GTF2A1-204ENST00000556268 SLIT3O75094 1523 aa12.82□□□□□ -0.36
GTF2A1-204ENST00000556268 OVOS2A0A0G2JMS6 1433 aa12.81□□□□□ -0.36
GTF2A1-204ENST00000556268 OVOS2A0A0J9YW53 1432 aa12.81□□□□□ -0.36
GTF2A1-204ENST00000556268 OVOS2Q6IE36 1432 aa12.81□□□□□ -0.36
GTF2A1-204ENST00000556268 RREB1Q92766 1687 aa12.81□□□□□ -0.36
GTF2A1-204ENST00000556268 ADD1P35611 737 aaKnown RBP12.81□□□□□ -0.36
GTF2A1-204ENST00000556268 EIF4G2P78344 907 aaKnown RBP eCLIP12.81□□□□□ -0.36
GTF2A1-204ENST00000556268 RNF20Q5VTR2 975 aa12.81□□□□□ -0.36
GTF2A1-204ENST00000556268 PEAK1Q9H792 1746 aa12.8□□□□□ -0.36
GTF2A1-204ENST00000556268 PARP4Q9UKK3 1724 aaKnown RBP12.8□□□□□ -0.36
GTF2A1-204ENST00000556268 COL18A1P39060 1754 aa12.8□□□□□ -0.36
GTF2A1-204ENST00000556268 ADH1AP07327 375 aa12.8□□□□□ -0.36
GTF2A1-204ENST00000556268 RELBQ01201 579 aa12.8□□□□□ -0.36
GTF2A1-204ENST00000556268 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
GTF2A1-204ENST00000556268 ZBTB7CA1YPR0 619 aa12.79□□□□□ -0.36
GTF2A1-204ENST00000556268 EXOC5O00471 708 aa12.79□□□□□ -0.36
GTF2A1-204ENST00000556268 YY1P25490 414 aa12.79□□□□□ -0.36
GTF2A1-204ENST00000556268 CEP126Q9P2H0 1117 aa12.79□□□□□ -0.36
GTF2A1-204ENST00000556268 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
GTF2A1-204ENST00000556268 CPSF1Q10570 1443 aaKnown RBP12.79□□□□□ -0.36
GTF2A1-204ENST00000556268 SPINT1O43278 529 aa12.78□□□□□ -0.36
GTF2A1-204ENST00000556268 WASHC4Q2M389 1173 aa12.78□□□□□ -0.36
GTF2A1-204ENST00000556268 SIN3AQ96ST3 1273 aa12.78□□□□□ -0.36
GTF2A1-204ENST00000556268 PDGFDQ9GZP0 370 aaPredicted RBP12.78□□□□□ -0.36
GTF2A1-204ENST00000556268 PCDHB11Q9Y5F2 797 aa12.78□□□□□ -0.36
GTF2A1-204ENST00000556268 NINLQ9Y2I6 1382 aa12.78□□□□□ -0.36
GTF2A1-204ENST00000556268 MAN1A2O60476 641 aa12.77□□□□□ -0.37
GTF2A1-204ENST00000556268 TXNRD1Q16881 649 aa12.77□□□□□ -0.37
GTF2A1-204ENST00000556268 PPP1R1BQ9UD71 204 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms