RNA–Protein interactions for RNA: ENST00000555728.5

ITGA7-213, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ITGA7, Length 3,930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-213ENST00000555728 CCP110O43303 1012 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 HMGB1P09429 215 aaKnown RBP13.69□□□□□ -0.22
ITGA7-213ENST00000555728 TYRO3Q06418 890 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 LDHAL6AQ6ZMR3 332 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 BICDL1Q6ZP65 573 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 LGR6Q9HBX8 967 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 MYOM2P54296 1465 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 PTGS1P23219 599 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 NDUFB9Q9Y6M9 179 aa13.69□□□□□ -0.22
ITGA7-213ENST00000555728 ZNF335Q9H4Z2 1342 aaPredicted RBP13.68□□□□□ -0.22
ITGA7-213ENST00000555728 LMTK2Q8IWU2 1503 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 TXLNAP40222 546 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 UBE2Q2Q8WVN8 375 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 SPHKAPQ2M3C7 1700 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 FRMPD1Q5SYB0 1578 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 CBFA2T2O43439 604 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 TTC21AQ8NDW8 1320 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 BCORL1Q5H9F3 1711 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 TMEM94Q12767 1356 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 HSP90AB3PQ58FF7 597 aa13.68□□□□□ -0.22
ITGA7-213ENST00000555728 KLF18A0A0U1RQI7 1052 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 IFIT3O14879 490 aaKnown RBP13.67□□□□□ -0.22
ITGA7-213ENST00000555728 TOP1P11387 765 aaKnown RBP13.67□□□□□ -0.22
ITGA7-213ENST00000555728 IFNL2Q8IZJ0 200 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 HMG20BQ9P0W2 317 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 AKAP2Q9Y2D5 859 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 CCDC66A2RUB6 948 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 CTAGE5O15320 804 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 ALDH1L1O75891 902 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 STX1AQ16623 288 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 ABCC4O15439 1325 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 SNRPA1P09661 255 aaKnown RBP13.67□□□□□ -0.22
ITGA7-213ENST00000555728 ZNF445P59923 1031 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 CNNM3Q8NE01 707 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 SLAIN2Q9P270 581 aa13.67□□□□□ -0.22
ITGA7-213ENST00000555728 SGSM2O43147 1006 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 SKILP12757 684 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 SIRT2Q8IXJ6 389 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 ZBTB9Q96C00 473 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 TRERF1Q96PN7 1200 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 TRMT112Q9UI30 125 aaKnown RBP13.66□□□□□ -0.22
ITGA7-213ENST00000555728 NOL7Q9UMY1 257 aaKnown RBP13.66□□□□□ -0.22
ITGA7-213ENST00000555728 CAMSAP1Q5T5Y3 1602 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 MARCKSP29966 332 aaPredicted RBP13.66□□□□□ -0.22
ITGA7-213ENST00000555728 TSC1Q92574 1164 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 PRIMPOLQ96LW4 560 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 BICC1Q9H694 974 aaKnown RBP13.66□□□□□ -0.22
ITGA7-213ENST00000555728 STARD3NLO95772 234 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 HOXC9P31274 260 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 ATP2B2Q01814 1243 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 ARHGAP29Q52LW3 1261 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 SIRT1Q96EB6 747 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 ZSWIM4Q9H7M6 989 aa13.66□□□□□ -0.22
ITGA7-213ENST00000555728 GNL3LQ9NVN8 582 aaKnown RBP13.66□□□□□ -0.22
ITGA7-213ENST00000555728 MAGEC2Q9UBF1 373 aaPredicted RBP13.66□□□□□ -0.22
ITGA7-213ENST00000555728 CCDC171Q6TFL3 1326 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 APOBRQ0VD83 1088 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 DHX8Q14562 1220 aaKnown RBP13.65□□□□□ -0.22
ITGA7-213ENST00000555728 CCDC129Q6ZRS4 1044 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 ACBD3Q9H3P7 528 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 CWC25Q9NXE8 425 aaPredicted RBP13.65□□□□□ -0.22
ITGA7-213ENST00000555728 DACH1Q9UI36 760 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 GOLGA8AA7E2F4 631 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 POLR3GO15318 223 aaPredicted RBP13.65□□□□□ -0.22
ITGA7-213ENST00000555728 EDC3Q96F86 508 aaKnown RBP13.65□□□□□ -0.22
ITGA7-213ENST00000555728 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
ITGA7-213ENST00000555728 MCMDC2Q4G0Z9 681 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 AKAP4Q5JQC9 854 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 AXDND1Q5T1B0 1012 aaPredicted RBP13.65□□□□□ -0.22
ITGA7-213ENST00000555728 USP44Q9H0E7 712 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
ITGA7-213ENST00000555728 TIMM10P62072 90 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 HS1BP3Q53T59 392 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 TMCO3Q6UWJ1 677 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 AOPEPQ8N6M6 819 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 ZSCAN16Q9H4T2 348 aaPredicted RBP13.64□□□□□ -0.23
ITGA7-213ENST00000555728 SLC12A7Q9Y666 1083 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 RTL1A6NKG5 1358 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 RANBP6O60518 1105 aaKnown RBP13.64□□□□□ -0.23
ITGA7-213ENST00000555728 GCP02774 474 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 IARSP41252 1262 aaKnown RBP13.64□□□□□ -0.23
ITGA7-213ENST00000555728 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 TRIM34Q9BYJ4 488 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 ZHX3Q9H4I2 956 aa13.64□□□□□ -0.23
ITGA7-213ENST00000555728 EPB41L2O43491 1005 aaKnown RBP13.63□□□□□ -0.23
ITGA7-213ENST00000555728 TFCP2Q12800 502 aa13.63□□□□□ -0.23
ITGA7-213ENST00000555728 CEP135Q66GS9 1140 aa13.63□□□□□ -0.23
ITGA7-213ENST00000555728 NGLY1Q96IV0 654 aa13.63□□□□□ -0.23
ITGA7-213ENST00000555728 IQSEC3Q9UPP2 1182 aaPredicted RBP13.63□□□□□ -0.23
ITGA7-213ENST00000555728 MAP3K5Q99683 1374 aa13.63□□□□□ -0.23
ITGA7-213ENST00000555728 BRD1O95696 1058 aa13.63□□□□□ -0.23
ITGA7-213ENST00000555728 SSBP05455 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms