RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 GOLGA6L6A8MZA4 724 aa19.2■□□□□ 0.66
TUBB3-209ENST00000555609 UQCRHP07919 91 aa19.2■□□□□ 0.66
TUBB3-209ENST00000555609 HMGN5P82970 282 aaKnown RBP19.2■□□□□ 0.66
TUBB3-209ENST00000555609 IFNL2Q8IZJ0 200 aa19.2■□□□□ 0.66
TUBB3-209ENST00000555609 NECAB1Q8N987 351 aa19.2■□□□□ 0.66
TUBB3-209ENST00000555609 KDM6AO15550 1401 aaPredicted RBP19.19■□□□□ 0.66
TUBB3-209ENST00000555609 RFX5P48382 616 aaPredicted RBP19.19■□□□□ 0.66
TUBB3-209ENST00000555609 COPS6Q7L5N1 327 aa19.19■□□□□ 0.66
TUBB3-209ENST00000555609 MYD88Q99836 296 aa19.19■□□□□ 0.66
TUBB3-209ENST00000555609 DDX19AQ9NUU7 478 aaKnown RBP19.19■□□□□ 0.66
TUBB3-209ENST00000555609 SPTLC3Q9NUV7 552 aa19.19■□□□□ 0.66
TUBB3-209ENST00000555609 TLR7Q9NYK1 1049 aaKnown RBP19.19■□□□□ 0.66
TUBB3-209ENST00000555609 TOB2Q14106 344 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-209ENST00000555609 MAP3K11Q16584 847 aa19.18■□□□□ 0.66
TUBB3-209ENST00000555609 TNNI3KQ59H18 835 aa19.18■□□□□ 0.66
TUBB3-209ENST00000555609 GIMAP6Q6P9H5 292 aa19.18■□□□□ 0.66
TUBB3-209ENST00000555609 FPGT-TNNI3KV9GXZ4 949 aa19.18■□□□□ 0.66
TUBB3-209ENST00000555609 LRP10Q7Z4F1 713 aa19.18■□□□□ 0.66
TUBB3-209ENST00000555609 TTC6Q86TZ1 520 aa19.18■□□□□ 0.66
TUBB3-209ENST00000555609 CHMP4CQ96CF2 233 aa19.18■□□□□ 0.66
TUBB3-209ENST00000555609 DCAF5Q96JK2 942 aa19.18■□□□□ 0.66
TUBB3-209ENST00000555609 NUP62CLQ9H1M0 184 aa19.18■□□□□ 0.66
TUBB3-209ENST00000555609 C1orf167Q5SNV9 1468 aa19.17■□□□□ 0.66
TUBB3-209ENST00000555609 HMGB1P09429 215 aaKnown RBP19.17■□□□□ 0.66
TUBB3-209ENST00000555609 PTPN12Q05209 780 aaKnown RBP19.17■□□□□ 0.66
TUBB3-209ENST00000555609 NOLC1Q14978 699 aaKnown RBP eCLIP19.17■□□□□ 0.66
TUBB3-209ENST00000555609 LMOD2Q6P5Q4 547 aa19.17■□□□□ 0.66
TUBB3-209ENST00000555609 FAM200AQ8TCP9 573 aa19.17■□□□□ 0.66
TUBB3-209ENST00000555609 FMNL2Q96PY5 1086 aa19.17■□□□□ 0.66
TUBB3-209ENST00000555609 LLPHQ9BRT6 129 aaKnown RBP19.17■□□□□ 0.66
TUBB3-209ENST00000555609 SIL1Q9H173 461 aa19.17■□□□□ 0.66
TUBB3-209ENST00000555609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.17■□□□□ 0.66
TUBB3-209ENST00000555609 CAVIN2O95810 425 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 NEK1Q96PY6 1258 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 HAUS7Q99871 368 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 ZSCAN16Q9H4T2 348 aaPredicted RBP19.16■□□□□ 0.66
TUBB3-209ENST00000555609 C5P01031 1676 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 ALS2Q96Q42 1657 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 MCMDC2Q4G0Z9 681 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 EPHA10Q5JZY3 1008 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 RBM43Q6ZSC3 357 aaKnown RBP19.16■□□□□ 0.66
TUBB3-209ENST00000555609 CDC37L1Q7L3B6 337 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 GTF3C6Q969F1 213 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 GPR108Q9NPR9 543 aa19.16■□□□□ 0.66
TUBB3-209ENST00000555609 GOLGA6L4A6NEF3 574 aa19.15■□□□□ 0.66
TUBB3-209ENST00000555609 ZNF589Q86UQ0 364 aaPredicted RBP19.15■□□□□ 0.66
TUBB3-209ENST00000555609 NFATC2IPQ8NCF5 419 aa19.15■□□□□ 0.66
TUBB3-209ENST00000555609 MYRIPQ8NFW9 859 aa19.15■□□□□ 0.66
TUBB3-209ENST00000555609 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
TUBB3-209ENST00000555609 DBNLQ9UJU6 430 aaKnown RBP19.15■□□□□ 0.66
TUBB3-209ENST00000555609 UBAP1LF5GYI3 381 aa19.14■□□□□ 0.65
TUBB3-209ENST00000555609 MYL6BP14649 208 aa19.14■□□□□ 0.65
TUBB3-209ENST00000555609 SLC39A6Q13433 755 aa19.14■□□□□ 0.65
TUBB3-209ENST00000555609 SPATA32Q96LK8 384 aa19.14■□□□□ 0.65
TUBB3-209ENST00000555609 SH3TC1Q8TE82 1336 aa19.14■□□□□ 0.65
TUBB3-209ENST00000555609 PLBD2Q8NHP8 589 aa19.14■□□□□ 0.65
TUBB3-209ENST00000555609 ZNF496Q96IT1 587 aaPredicted RBP19.14■□□□□ 0.65
TUBB3-209ENST00000555609 TFCP2Q12800 502 aa19.13■□□□□ 0.65
TUBB3-209ENST00000555609 ATL3Q6DD88 541 aa19.13■□□□□ 0.65
TUBB3-209ENST00000555609 LEO1Q8WVC0 666 aaPredicted RBP19.13■□□□□ 0.65
TUBB3-209ENST00000555609 NLRP2Q9NX02 1062 aa19.13■□□□□ 0.65
TUBB3-209ENST00000555609 CFAP45Q9UL16 551 aa19.13■□□□□ 0.65
TUBB3-209ENST00000555609 KIF3AQ9Y496 699 aa19.13■□□□□ 0.65
TUBB3-209ENST00000555609 GTF2F1P35269 517 aaKnown RBP eCLIP19.12■□□□□ 0.65
TUBB3-209ENST00000555609 PIP4K2BP78356 416 aa19.12■□□□□ 0.65
TUBB3-209ENST00000555609 TYRO3Q06418 890 aa19.12■□□□□ 0.65
TUBB3-209ENST00000555609 TNMDQ9H2S6 317 aa19.12■□□□□ 0.65
TUBB3-209ENST00000555609 CLSTN2Q9H4D0 955 aa19.12■□□□□ 0.65
TUBB3-209ENST00000555609 HELLSQ9NRZ9 838 aa19.12■□□□□ 0.65
TUBB3-209ENST00000555609 PALLDQ8WX93 1383 aa19.12■□□□□ 0.65
TUBB3-209ENST00000555609 CASP7P55210 303 aa19.11■□□□□ 0.65
TUBB3-209ENST00000555609 DNTTIP2Q5QJE6 756 aaKnown RBP19.11■□□□□ 0.65
TUBB3-209ENST00000555609 KBTBD3Q8NAB2 608 aa19.11■□□□□ 0.65
TUBB3-209ENST00000555609 DDX54Q8TDD1 881 aaKnown RBP19.11■□□□□ 0.65
TUBB3-209ENST00000555609 RGPD5Q99666 1765 aa19.11■□□□□ 0.65
TUBB3-209ENST00000555609 KLHDC4Q8TBB5 520 aa19.11■□□□□ 0.65
TUBB3-209ENST00000555609 LIG1P18858 919 aa19.1■□□□□ 0.65
TUBB3-209ENST00000555609 RESTQ13127 1097 aa19.1■□□□□ 0.65
TUBB3-209ENST00000555609 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.1■□□□□ 0.65
TUBB3-209ENST00000555609 SMARCC2Q8TAQ2 1214 aa19.1■□□□□ 0.65
TUBB3-209ENST00000555609 DSCC1Q9BVC3 393 aa19.1■□□□□ 0.65
TUBB3-209ENST00000555609 USP16Q9Y5T5 823 aa19.1■□□□□ 0.65
TUBB3-209ENST00000555609 MRVI1Q9Y6F6 885 aa19.1■□□□□ 0.65
TUBB3-209ENST00000555609 PFKFB2O60825 505 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 NAA16Q6N069 864 aaPredicted RBP19.09■□□□□ 0.65
TUBB3-209ENST00000555609 KIAA1524Q8TCG1 905 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 TTC12Q9H892 705 aaPredicted RBP19.09■□□□□ 0.65
TUBB3-209ENST00000555609 ZNF609O15014 1411 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 MEGF6O75095 1541 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 COL18A1P39060 1754 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 A0A087WZG4 1122 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 H7C1W4 665 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 ZC3H6P61129 1189 aaKnown RBP19.09■□□□□ 0.65
TUBB3-209ENST00000555609 Q6ZUG5 572 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 UBE3BQ7Z3V4 1068 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 FERMT3Q86UX7 667 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 DACT1Q9NYF0 836 aa19.09■□□□□ 0.65
TUBB3-209ENST00000555609 PKD1L3Q7Z443 1732 aa19.08■□□□□ 0.65
TUBB3-209ENST00000555609 CTAGE5O15320 804 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms