RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 H7C1W4 665 aa17.82■□□□□ 0.44
XRCC3-211ENST00000555055 RUFY3Q7L099 469 aa17.82■□□□□ 0.44
XRCC3-211ENST00000555055 SLC4A9Q96Q91 983 aa17.82■□□□□ 0.44
XRCC3-211ENST00000555055 RBM8AQ9Y5S9 174 aaKnown RBP17.82■□□□□ 0.44
XRCC3-211ENST00000555055 ABCC6O95255 1503 aa17.82■□□□□ 0.44
XRCC3-211ENST00000555055 TOGARAM1Q9Y4F4 1720 aa17.82■□□□□ 0.44
XRCC3-211ENST00000555055 HLFQ16534 295 aa17.81■□□□□ 0.44
XRCC3-211ENST00000555055 MAP7D2Q96T17 732 aa17.81■□□□□ 0.44
XRCC3-211ENST00000555055 CWC22Q9HCG8 908 aaKnown RBP17.81■□□□□ 0.44
XRCC3-211ENST00000555055 RBM27Q9P2N5 1060 aaKnown RBP17.81■□□□□ 0.44
XRCC3-211ENST00000555055 NSFL1CQ9UNZ2 370 aaKnown RBP17.81■□□□□ 0.44
XRCC3-211ENST00000555055 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
XRCC3-211ENST00000555055 ATG9AQ7Z3C6 839 aa17.81■□□□□ 0.44
XRCC3-211ENST00000555055 RUFY2Q8WXA3 655 aa17.81■□□□□ 0.44
XRCC3-211ENST00000555055 NUTM2BA6NNL0 878 aaPredicted RBP17.8■□□□□ 0.44
XRCC3-211ENST00000555055 NUTM2EB1AL46 878 aaPredicted RBP17.8■□□□□ 0.44
XRCC3-211ENST00000555055 MSNP26038 577 aaKnown RBP17.8■□□□□ 0.44
XRCC3-211ENST00000555055 NUTM2AQ8IVF1 878 aaPredicted RBP17.8■□□□□ 0.44
XRCC3-211ENST00000555055 PDLIM2Q96JY6 352 aa17.8■□□□□ 0.44
XRCC3-211ENST00000555055 CUL4AQ13619 759 aa17.8■□□□□ 0.44
XRCC3-211ENST00000555055 CAVIN1Q6NZI2 390 aaKnown RBP17.8■□□□□ 0.44
XRCC3-211ENST00000555055 ACSBG1Q96GR2 724 aa17.8■□□□□ 0.44
XRCC3-211ENST00000555055 TTC14Q96N46 770 aa17.8■□□□□ 0.44
XRCC3-211ENST00000555055 ZNF500O60304 480 aaPredicted RBP17.79■□□□□ 0.44
XRCC3-211ENST00000555055 LMBRD1Q9NUN5 540 aa17.79■□□□□ 0.44
XRCC3-211ENST00000555055 COL15A1P39059 1388 aa17.79■□□□□ 0.44
XRCC3-211ENST00000555055 CREB3L3Q68CJ9 461 aa17.79■□□□□ 0.44
XRCC3-211ENST00000555055 NECAB1Q8N987 351 aa17.79■□□□□ 0.44
XRCC3-211ENST00000555055 CCDC83Q8IWF9 413 aa17.78■□□□□ 0.44
XRCC3-211ENST00000555055 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
XRCC3-211ENST00000555055 FAM177BA6PVY3 158 aa17.78■□□□□ 0.44
XRCC3-211ENST00000555055 MCM5P33992 734 aa17.78■□□□□ 0.44
XRCC3-211ENST00000555055 PRIM1P49642 420 aaKnown RBP17.78■□□□□ 0.44
XRCC3-211ENST00000555055 NECTIN1Q15223 517 aa17.78■□□□□ 0.44
XRCC3-211ENST00000555055 TBC1D2BQ9UPU7 963 aa17.78■□□□□ 0.44
XRCC3-211ENST00000555055 ZBTB1Q9Y2K1 713 aa17.78■□□□□ 0.44
XRCC3-211ENST00000555055 GOLIM4O00461 696 aa17.77■□□□□ 0.44
XRCC3-211ENST00000555055 MCM2P49736 904 aa17.77■□□□□ 0.44
XRCC3-211ENST00000555055 NOL7Q9UMY1 257 aaKnown RBP17.77■□□□□ 0.44
XRCC3-211ENST00000555055 GPT2Q8TD30 523 aa17.77■□□□□ 0.43
XRCC3-211ENST00000555055 SNRKQ9NRH2 765 aa17.77■□□□□ 0.43
XRCC3-211ENST00000555055 UBR2Q8IWV8 1755 aa17.77■□□□□ 0.43
XRCC3-211ENST00000555055 SLC27A2O14975 620 aa17.76■□□□□ 0.43
XRCC3-211ENST00000555055 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
XRCC3-211ENST00000555055 PDRG1Q9NUG6 133 aa17.76■□□□□ 0.43
XRCC3-211ENST00000555055 TNS2Q63HR2 1409 aa17.76■□□□□ 0.43
XRCC3-211ENST00000555055 CCDC191Q8NCU4 936 aa17.76■□□□□ 0.43
XRCC3-211ENST00000555055 MAP4K1Q92918 833 aa17.76■□□□□ 0.43
XRCC3-211ENST00000555055 NHSL1Q5SYE7 1610 aa17.75■□□□□ 0.43
XRCC3-211ENST00000555055 A0A0G2JLW4 131 aa17.75■□□□□ 0.43
XRCC3-211ENST00000555055 ATP5JP18859 108 aa17.75■□□□□ 0.43
XRCC3-211ENST00000555055 TCIRG1Q13488 830 aa17.75■□□□□ 0.43
XRCC3-211ENST00000555055 EXOC5O00471 708 aa17.75■□□□□ 0.43
XRCC3-211ENST00000555055 BRD1O95696 1058 aa17.75■□□□□ 0.43
XRCC3-211ENST00000555055 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
XRCC3-211ENST00000555055 ADORA1P30542 326 aa17.74■□□□□ 0.43
XRCC3-211ENST00000555055 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
XRCC3-211ENST00000555055 A0A1B0GUL7 405 aa17.74■□□□□ 0.43
XRCC3-211ENST00000555055 ST3GAL1Q11201 340 aa17.74■□□□□ 0.43
XRCC3-211ENST00000555055 STK3Q13188 491 aa17.74■□□□□ 0.43
XRCC3-211ENST00000555055 ZSCAN23Q3MJ62 389 aa17.74■□□□□ 0.43
XRCC3-211ENST00000555055 VPS53Q5VIR6 699 aa17.74■□□□□ 0.43
XRCC3-211ENST00000555055 PI16Q6UXB8 463 aa17.74■□□□□ 0.43
XRCC3-211ENST00000555055 KIF6Q6ZMV9 814 aa17.74■□□□□ 0.43
XRCC3-211ENST00000555055 ZNF609O15014 1411 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 TJP1Q07157 1748 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 ZKSCAN1P17029 563 aaPredicted RBP17.73■□□□□ 0.43
XRCC3-211ENST00000555055 ME3Q16798 604 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 ISCA1Q9BUE6 129 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 LRRC2Q9BYS8 371 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 CYP46A1Q9Y6A2 500 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 NUP188Q5SRE5 1749 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 EYA2O00167 538 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 MTERF4Q7Z6M4 381 aaKnown RBP17.73■□□□□ 0.43
XRCC3-211ENST00000555055 IL17RAQ96F46 866 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 TPCN1Q9ULQ1 816 aa17.73■□□□□ 0.43
XRCC3-211ENST00000555055 RPAP1Q9BWH6 1393 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-211ENST00000555055 ROBO1Q9Y6N7 1651 aa17.72■□□□□ 0.43
XRCC3-211ENST00000555055 TAF5LO75529 589 aa17.72■□□□□ 0.43
XRCC3-211ENST00000555055 STARD3NLO95772 234 aa17.72■□□□□ 0.43
XRCC3-211ENST00000555055 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
XRCC3-211ENST00000555055 CSPP1Q1MSJ5 1256 aa17.72■□□□□ 0.43
XRCC3-211ENST00000555055 CCDC57Q2TAC2 916 aa17.72■□□□□ 0.43
XRCC3-211ENST00000555055 MED23Q9ULK4 1368 aa17.72■□□□□ 0.43
XRCC3-211ENST00000555055 KCNQ4P56696 695 aa17.72■□□□□ 0.43
XRCC3-211ENST00000555055 INTS4Q96HW7 963 aaKnown RBP17.72■□□□□ 0.43
XRCC3-211ENST00000555055 ZSWIM6Q9HCJ5 1215 aa17.72■□□□□ 0.43
XRCC3-211ENST00000555055 PAPPAQ13219 1627 aa17.71■□□□□ 0.43
XRCC3-211ENST00000555055 PPFIA3O75145 1194 aa17.71■□□□□ 0.43
XRCC3-211ENST00000555055 GADD45BO75293 160 aaPredicted RBP17.71■□□□□ 0.43
XRCC3-211ENST00000555055 HAUS7Q99871 368 aa17.71■□□□□ 0.43
XRCC3-211ENST00000555055 CYP19A1P11511 503 aaPredicted RBP17.71■□□□□ 0.43
XRCC3-211ENST00000555055 TAF7LQ5H9L4 462 aa17.71■□□□□ 0.43
XRCC3-211ENST00000555055 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 GOLGB1Q14789 3259 aaKnown RBP17.7■□□□□ 0.42
XRCC3-211ENST00000555055 GREM2Q9H772 168 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 ITGB4P16144 1822 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 HIP1O00291 1037 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 SYT1P21579 422 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 GJB2P29033 226 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms