RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 CIAPIN1Q6FI81 312 aa12.67□□□□□ -0.38
TMEM253-204ENST00000554844 MPNDQ8N594 471 aa12.67□□□□□ -0.38
TMEM253-204ENST00000554844 THSD7BQ9C0I4 1608 aa12.66□□□□□ -0.38
TMEM253-204ENST00000554844 ABCC4O15439 1325 aa12.66□□□□□ -0.38
TMEM253-204ENST00000554844 CDHR2Q9BYE9 1310 aa12.66□□□□□ -0.38
TMEM253-204ENST00000554844 CCDC85CA6NKD9 419 aa12.66□□□□□ -0.38
TMEM253-204ENST00000554844 MAP2K2P36507 400 aa12.66□□□□□ -0.38
TMEM253-204ENST00000554844 GMPSP49915 693 aaPredicted RBP12.66□□□□□ -0.38
TMEM253-204ENST00000554844 ZNF408Q9H9D4 720 aa12.66□□□□□ -0.38
TMEM253-204ENST00000554844 H7C1D1 291 aa12.65□□□□□ -0.38
TMEM253-204ENST00000554844 FMR1Q06787 632 aaKnown RBP eCLIP12.65□□□□□ -0.38
TMEM253-204ENST00000554844 CXCL9Q07325 125 aa12.65□□□□□ -0.38
TMEM253-204ENST00000554844 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.38
TMEM253-204ENST00000554844 POLA2Q14181 598 aa12.65□□□□□ -0.38
TMEM253-204ENST00000554844 SLC10A5Q5PT55 438 aa12.65□□□□□ -0.38
TMEM253-204ENST00000554844 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
TMEM253-204ENST00000554844 TMC4Q7Z404 712 aa12.65□□□□□ -0.38
TMEM253-204ENST00000554844 SP8Q8IXZ3 490 aa12.65□□□□□ -0.38
TMEM253-204ENST00000554844 PLEKHF1Q96S99 279 aa12.65□□□□□ -0.38
TMEM253-204ENST00000554844 TRMT112Q9UI30 125 aaKnown RBP12.65□□□□□ -0.38
TMEM253-204ENST00000554844 RAD17O75943 681 aa12.64□□□□□ -0.39
TMEM253-204ENST00000554844 RIPK4P57078 832 aa12.64□□□□□ -0.39
TMEM253-204ENST00000554844 KIAA2012Q0VF49 1180 aa12.64□□□□□ -0.39
TMEM253-204ENST00000554844 GRAPQ13588 217 aa12.64□□□□□ -0.39
TMEM253-204ENST00000554844 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
TMEM253-204ENST00000554844 CST9Q5W186 159 aa12.64□□□□□ -0.39
TMEM253-204ENST00000554844 GRAPLQ8TC17 118 aaPredicted RBP12.64□□□□□ -0.39
TMEM253-204ENST00000554844 ZC3H15Q8WU90 426 aaKnown RBP12.64□□□□□ -0.39
TMEM253-204ENST00000554844 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
TMEM253-204ENST00000554844 RTFDC1Q9BY42 306 aaPredicted RBP12.64□□□□□ -0.39
TMEM253-204ENST00000554844 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
TMEM253-204ENST00000554844 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
TMEM253-204ENST00000554844 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
TMEM253-204ENST00000554844 AOC2O75106 756 aa12.63□□□□□ -0.39
TMEM253-204ENST00000554844 HCLS1P14317 486 aaPredicted RBP12.63□□□□□ -0.39
TMEM253-204ENST00000554844 CDC37L1Q7L3B6 337 aa12.63□□□□□ -0.39
TMEM253-204ENST00000554844 SAPCD2Q86UD0 394 aa12.63□□□□□ -0.39
TMEM253-204ENST00000554844 NECTIN2Q92692 538 aa12.63□□□□□ -0.39
TMEM253-204ENST00000554844 HHIPL1Q96JK4 782 aa12.63□□□□□ -0.39
TMEM253-204ENST00000554844 ANKRD36CQ5JPF3 1778 aa12.63□□□□□ -0.39
TMEM253-204ENST00000554844 ANXA1P04083 346 aa12.62□□□□□ -0.39
TMEM253-204ENST00000554844 BRPF1P55201 1214 aaPredicted RBP12.62□□□□□ -0.39
TMEM253-204ENST00000554844 MLLT1Q03111 559 aaPredicted RBP12.62□□□□□ -0.39
TMEM253-204ENST00000554844 COPS6Q7L5N1 327 aa12.62□□□□□ -0.39
TMEM253-204ENST00000554844 SLC51AQ86UW1 340 aa12.62□□□□□ -0.39
TMEM253-204ENST00000554844 NLRP10Q86W26 655 aa12.62□□□□□ -0.39
TMEM253-204ENST00000554844 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
TMEM253-204ENST00000554844 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
TMEM253-204ENST00000554844 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
TMEM253-204ENST00000554844 PDIA6Q15084 440 aa12.61□□□□□ -0.39
TMEM253-204ENST00000554844 CNOT7Q9UIV1 285 aaKnown RBP12.61□□□□□ -0.39
TMEM253-204ENST00000554844 G3V3G9 751 aa12.6□□□□□ -0.39
TMEM253-204ENST00000554844 NOGQ13253 232 aa12.6□□□□□ -0.39
TMEM253-204ENST00000554844 WASHC4Q2M389 1173 aa12.6□□□□□ -0.39
TMEM253-204ENST00000554844 PROSER3Q2NL68 480 aa12.6□□□□□ -0.39
TMEM253-204ENST00000554844 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
TMEM253-204ENST00000554844 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
TMEM253-204ENST00000554844 EYA3Q99504 573 aa12.6□□□□□ -0.39
TMEM253-204ENST00000554844 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
TMEM253-204ENST00000554844 LAS1LQ9Y4W2 734 aaKnown RBP12.6□□□□□ -0.39
TMEM253-204ENST00000554844 LAMB2P55268 1798 aa12.6□□□□□ -0.39
TMEM253-204ENST00000554844 C6orf229H3BNL8 230 aa12.59□□□□□ -0.39
TMEM253-204ENST00000554844 HUNKP57058 714 aa12.59□□□□□ -0.39
TMEM253-204ENST00000554844 LRP10Q7Z4F1 713 aa12.59□□□□□ -0.39
TMEM253-204ENST00000554844 TRPM4Q8TD43 1214 aa12.59□□□□□ -0.39
TMEM253-204ENST00000554844 PGAP2Q9UHJ9 254 aa12.59□□□□□ -0.39
TMEM253-204ENST00000554844 NSFL1CQ9UNZ2 370 aaKnown RBP12.59□□□□□ -0.39
TMEM253-204ENST00000554844 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
TMEM253-204ENST00000554844 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
TMEM253-204ENST00000554844 DGKZQ13574 1117 aa12.58□□□□□ -0.4
TMEM253-204ENST00000554844 NEUROD2Q15784 382 aa12.58□□□□□ -0.4
TMEM253-204ENST00000554844 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
TMEM253-204ENST00000554844 USP48Q86UV5 1035 aa12.58□□□□□ -0.4
TMEM253-204ENST00000554844 C2orf69Q8N8R5 385 aa12.58□□□□□ -0.4
TMEM253-204ENST00000554844 DPF2Q92785 391 aa12.58□□□□□ -0.4
TMEM253-204ENST00000554844 DCPSQ96C86 337 aaKnown RBP12.58□□□□□ -0.4
TMEM253-204ENST00000554844 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
TMEM253-204ENST00000554844 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
TMEM253-204ENST00000554844 RALBP1Q15311 655 aa12.57□□□□□ -0.4
TMEM253-204ENST00000554844 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
TMEM253-204ENST00000554844 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
TMEM253-204ENST00000554844 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
TMEM253-204ENST00000554844 DBNDD1Q9H9R9 158 aa12.57□□□□□ -0.4
TMEM253-204ENST00000554844 YDJCA8MPS7 323 aa12.56□□□□□ -0.4
TMEM253-204ENST00000554844 PSMD14O00487 310 aa12.56□□□□□ -0.4
TMEM253-204ENST00000554844 HIRAP54198 1017 aaPredicted RBP12.56□□□□□ -0.4
TMEM253-204ENST00000554844 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMEM253-204ENST00000554844 TBC1D10BQ4KMP7 808 aaPredicted RBP12.56□□□□□ -0.4
TMEM253-204ENST00000554844 RBM26Q5T8P6 1007 aaKnown RBP12.56□□□□□ -0.4
TMEM253-204ENST00000554844 ANKRD13DQ6ZTN6 518 aa12.56□□□□□ -0.4
TMEM253-204ENST00000554844 CCDC102AQ96A19 550 aa12.56□□□□□ -0.4
TMEM253-204ENST00000554844 GBA2Q9HCG7 927 aaPredicted RBP12.56□□□□□ -0.4
TMEM253-204ENST00000554844 CHPF2Q9P2E5 772 aa12.56□□□□□ -0.4
TMEM253-204ENST00000554844 DBF4Q9UBU7 674 aaPredicted RBP12.56□□□□□ -0.4
TMEM253-204ENST00000554844 DDX60Q8IY21 1712 aaKnown RBP12.56□□□□□ -0.4
TMEM253-204ENST00000554844 LRRC37AA6NMS7 1700 aa12.55□□□□□ -0.4
TMEM253-204ENST00000554844 ECE2O60344 883 aa12.55□□□□□ -0.4
TMEM253-204ENST00000554844 HOXB7P09629 217 aa12.55□□□□□ -0.4
TMEM253-204ENST00000554844 RGMBQ6NW40 437 aa12.55□□□□□ -0.4
TMEM253-204ENST00000554844 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms