RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 CRY2Q49AN0 593 aa18.58■□□□□ 0.56
PSMA6-208ENST00000554843 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
PSMA6-208ENST00000554843 CSF1RP07333 972 aa18.57■□□□□ 0.56
PSMA6-208ENST00000554843 C3orf67Q6ZVT6 689 aa18.57■□□□□ 0.56
PSMA6-208ENST00000554843 C1orf115Q9H7X2 142 aa18.57■□□□□ 0.56
PSMA6-208ENST00000554843 CCDC152Q4G0S7 254 aa18.56■□□□□ 0.56
PSMA6-208ENST00000554843 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
PSMA6-208ENST00000554843 CD2APQ9Y5K6 639 aa18.56■□□□□ 0.56
PSMA6-208ENST00000554843 CEP85Q6P2H3 762 aa18.55■□□□□ 0.56
PSMA6-208ENST00000554843 LMBR1LQ6UX01 489 aa18.55■□□□□ 0.56
PSMA6-208ENST00000554843 FAM161AQ3B820 660 aa18.54■□□□□ 0.56
PSMA6-208ENST00000554843 ERICH6BQ5W0A0 696 aa18.54■□□□□ 0.56
PSMA6-208ENST00000554843 RPAP2Q8IXW5 612 aaPredicted RBP18.54■□□□□ 0.56
PSMA6-208ENST00000554843 SRGNP10124 158 aa18.53■□□□□ 0.56
PSMA6-208ENST00000554843 TGFB2P61812 414 aa18.53■□□□□ 0.56
PSMA6-208ENST00000554843 GREM2Q9H772 168 aa18.53■□□□□ 0.56
PSMA6-208ENST00000554843 HOXA10P31260 410 aaPredicted RBP18.52■□□□□ 0.56
PSMA6-208ENST00000554843 ATP8B2P98198 1209 aa18.52■□□□□ 0.56
PSMA6-208ENST00000554843 RPGRQ92834 1020 aaKnown RBP18.52■□□□□ 0.56
PSMA6-208ENST00000554843 CHMP3Q9Y3E7 222 aa18.52■□□□□ 0.56
PSMA6-208ENST00000554843 NPR1P16066 1061 aa18.51■□□□□ 0.55
PSMA6-208ENST00000554843 POLA2Q14181 598 aa18.51■□□□□ 0.55
PSMA6-208ENST00000554843 C2CD5Q86YS7 1000 aa18.51■□□□□ 0.55
PSMA6-208ENST00000554843 SSH3Q8TE77 659 aa18.51■□□□□ 0.55
PSMA6-208ENST00000554843 MASTLQ96GX5 879 aa18.51■□□□□ 0.55
PSMA6-208ENST00000554843 PCDHB15Q9Y5E8 787 aa18.51■□□□□ 0.55
PSMA6-208ENST00000554843 BRCA1P38398 1863 aaKnown RBP18.51■□□□□ 0.55
PSMA6-208ENST00000554843 PNMA6EA0A0J9YXQ4 647 aa18.5■□□□□ 0.55
PSMA6-208ENST00000554843 H0YIN7 160 aa18.5■□□□□ 0.55
PSMA6-208ENST00000554843 SRGAP3O43295 1099 aa18.5■□□□□ 0.55
PSMA6-208ENST00000554843 HMMRO75330 724 aa18.5■□□□□ 0.55
PSMA6-208ENST00000554843 ITGA6P23229 1130 aa18.5■□□□□ 0.55
PSMA6-208ENST00000554843 RFX5P48382 616 aaPredicted RBP18.5■□□□□ 0.55
PSMA6-208ENST00000554843 IFIT5Q13325 482 aaKnown RBP18.5■□□□□ 0.55
PSMA6-208ENST00000554843 STYK1Q6J9G0 422 aa18.5■□□□□ 0.55
PSMA6-208ENST00000554843 DDX46Q7L014 1031 aaKnown RBP18.5■□□□□ 0.55
PSMA6-208ENST00000554843 CCDC85AQ96PX6 553 aaPredicted RBP18.5■□□□□ 0.55
PSMA6-208ENST00000554843 CRAMP1Q96RY5 1269 aa18.5■□□□□ 0.55
PSMA6-208ENST00000554843 CDC5LQ99459 802 aaKnown RBP18.5■□□□□ 0.55
PSMA6-208ENST00000554843 COL4A1P02462 1669 aa18.5■□□□□ 0.55
PSMA6-208ENST00000554843 ANKRD18BA2A2Z9 1011 aa18.49■□□□□ 0.55
PSMA6-208ENST00000554843 CCDC57Q2TAC2 916 aa18.49■□□□□ 0.55
PSMA6-208ENST00000554843 SIRT2Q8IXJ6 389 aa18.49■□□□□ 0.55
PSMA6-208ENST00000554843 RBM17Q96I25 401 aaKnown RBP18.49■□□□□ 0.55
PSMA6-208ENST00000554843 PPP1R1BQ9UD71 204 aaPredicted RBP18.49■□□□□ 0.55
PSMA6-208ENST00000554843 LRRC37AA6NMS7 1700 aa18.49■□□□□ 0.55
PSMA6-208ENST00000554843 CHRNA5P30532 468 aa18.48■□□□□ 0.55
PSMA6-208ENST00000554843 GRAPQ13588 217 aa18.48■□□□□ 0.55
PSMA6-208ENST00000554843 KLHL34Q8N239 644 aa18.48■□□□□ 0.55
PSMA6-208ENST00000554843 GRAPLQ8TC17 118 aaPredicted RBP18.48■□□□□ 0.55
PSMA6-208ENST00000554843 COPRSQ9NQ92 184 aa18.48■□□□□ 0.55
PSMA6-208ENST00000554843 SEC31BQ9NQW1 1179 aa18.48■□□□□ 0.55
PSMA6-208ENST00000554843 DPEP1P16444 411 aa18.47■□□□□ 0.55
PSMA6-208ENST00000554843 CELF1Q92879 486 aaKnown RBP18.47■□□□□ 0.55
PSMA6-208ENST00000554843 CNKSR1Q969H4 720 aa18.47■□□□□ 0.55
PSMA6-208ENST00000554843 FHDC1Q9C0D6 1143 aaPredicted RBP18.47■□□□□ 0.55
PSMA6-208ENST00000554843 SPEF2Q9C093 1822 aa18.46■□□□□ 0.55
PSMA6-208ENST00000554843 TAF1P21675 1872 aa18.46■□□□□ 0.55
PSMA6-208ENST00000554843 ALDH1B1P30837 517 aa18.46■□□□□ 0.55
PSMA6-208ENST00000554843 IGHMBP2P38935 993 aaKnown RBP18.46■□□□□ 0.55
PSMA6-208ENST00000554843 PTPN12Q05209 780 aaKnown RBP18.46■□□□□ 0.55
PSMA6-208ENST00000554843 HDAC1Q13547 482 aaPredicted RBP18.46■□□□□ 0.55
PSMA6-208ENST00000554843 FBXO3Q9UK99 471 aa18.46■□□□□ 0.55
PSMA6-208ENST00000554843 CACNA1SQ13698 1873 aa18.46■□□□□ 0.54
PSMA6-208ENST00000554843 KCNA3P22001 575 aa18.45■□□□□ 0.54
PSMA6-208ENST00000554843 TAF7LQ5H9L4 462 aa18.45■□□□□ 0.54
PSMA6-208ENST00000554843 TMC4Q7Z404 712 aa18.45■□□□□ 0.54
PSMA6-208ENST00000554843 ANKRD18AQ8IVF6 992 aa18.45■□□□□ 0.54
PSMA6-208ENST00000554843 RPS8P62241 208 aaKnown RBP18.44■□□□□ 0.54
PSMA6-208ENST00000554843 NLGN2Q8NFZ4 835 aa18.44■□□□□ 0.54
PSMA6-208ENST00000554843 ZNF622Q969S3 477 aaKnown RBP eCLIP18.44■□□□□ 0.54
PSMA6-208ENST00000554843 NOP58Q9Y2X3 529 aaKnown RBP18.44■□□□□ 0.54
PSMA6-208ENST00000554843 A0A1B0GUL6 1792 aa18.44■□□□□ 0.54
PSMA6-208ENST00000554843 SLX4Q8IY92 1834 aa18.44■□□□□ 0.54
PSMA6-208ENST00000554843 A0A0G2JLW4 131 aa18.43■□□□□ 0.54
PSMA6-208ENST00000554843 BBOX1O75936 387 aa18.43■□□□□ 0.54
PSMA6-208ENST00000554843 CIAO1O76071 339 aa18.43■□□□□ 0.54
PSMA6-208ENST00000554843 SYT17Q9BSW7 474 aa18.43■□□□□ 0.54
PSMA6-208ENST00000554843 BSDC1Q9NW68 430 aaPredicted RBP18.43■□□□□ 0.54
PSMA6-208ENST00000554843 EYA2O00167 538 aa18.42■□□□□ 0.54
PSMA6-208ENST00000554843 PPEF1O14829 653 aaPredicted RBP18.42■□□□□ 0.54
PSMA6-208ENST00000554843 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
PSMA6-208ENST00000554843 TTLL6Q8N841 843 aa18.42■□□□□ 0.54
PSMA6-208ENST00000554843 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
PSMA6-208ENST00000554843 ZNF594Q96JF6 807 aaPredicted RBP18.42■□□□□ 0.54
PSMA6-208ENST00000554843 MPHOSPH8Q99549 860 aa18.42■□□□□ 0.54
PSMA6-208ENST00000554843 PIM2Q9P1W9 311 aa18.42■□□□□ 0.54
PSMA6-208ENST00000554843 PA2G4Q9UQ80 394 aaKnown RBP18.42■□□□□ 0.54
PSMA6-208ENST00000554843 LDHAL6AQ6ZMR3 332 aa18.41■□□□□ 0.54
PSMA6-208ENST00000554843 RWDD1Q9H446 243 aaPredicted RBP18.41■□□□□ 0.54
PSMA6-208ENST00000554843 ARFGEF1Q9Y6D6 1849 aa18.41■□□□□ 0.54
PSMA6-208ENST00000554843 LTBP1Q14766 1721 aa18.4■□□□□ 0.54
PSMA6-208ENST00000554843 SURF6O75683 361 aaKnown RBP18.4■□□□□ 0.54
PSMA6-208ENST00000554843 HSP90AB4PQ58FF6 505 aa18.4■□□□□ 0.54
PSMA6-208ENST00000554843 DCTPP1Q9H773 170 aa18.4■□□□□ 0.54
PSMA6-208ENST00000554843 CNNM1Q9NRU3 951 aa18.4■□□□□ 0.54
PSMA6-208ENST00000554843 ATP6V0A2Q9Y487 856 aa18.4■□□□□ 0.54
PSMA6-208ENST00000554843 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
PSMA6-208ENST00000554843 IL15P40933 162 aaPredicted RBP18.39■□□□□ 0.53
PSMA6-208ENST00000554843 DALRD3Q5D0E6 543 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms