RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 GSX2Q9BZM3 304 aa2.96□□□□□ -1.94
PRPF39-208ENST00000554785 ANKIB1Q9P2G1 1089 aa2.96□□□□□ -1.94
PRPF39-208ENST00000554785 NOVA2Q9UNW9 492 aaKnown RBP2.96□□□□□ -1.94
PRPF39-208ENST00000554785 KCNH4Q9UQ05 1017 aa2.96□□□□□ -1.94
PRPF39-208ENST00000554785 CHMP3Q9Y3E7 222 aa2.96□□□□□ -1.94
PRPF39-208ENST00000554785 M0R082 166 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 DGKZQ13574 1117 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 OCLNQ16625 522 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 ZNF417Q8TAU3 575 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 FAM200AQ8TCP9 573 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 ZNF587Q96SQ5 575 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-208ENST00000554785 PLVAPQ9BX97 442 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 SAP130Q9H0E3 1048 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 SLAIN2Q9P270 581 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 C9orf172C9J069 976 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 FAM229AH3BQW9 127 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 OPLAHO14841 1288 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 DYRK3O43781 588 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 PRMT3O60678 531 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 INPP5BP32019 993 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 ADH7P40394 386 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 C20orf204Q6ZNR8 217 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 MICALL1Q8N3F8 863 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 IGFLR1Q9H665 355 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 ZFATQ9P243 1243 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 NAGPAQ9UK23 515 aa2.95□□□□□ -1.94
PRPF39-208ENST00000554785 TGFBR3LH3BV60 316 aa2.94□□□□□ -1.94
PRPF39-208ENST00000554785 TARSP26639 723 aaKnown RBP2.94□□□□□ -1.94
PRPF39-208ENST00000554785 IDH3AP50213 366 aa2.94□□□□□ -1.94
PRPF39-208ENST00000554785 NRG1Q02297 640 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-208ENST00000554785 NEUROD1Q13562 356 aa2.94□□□□□ -1.94
PRPF39-208ENST00000554785 COX20Q5RI15 118 aa2.94□□□□□ -1.94
PRPF39-208ENST00000554785 ZBTB42B2RXF5 422 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 NID1P14543 1247 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 NFKB1P19838 968 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 SCNN1AP37088 669 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 PLAURQ03405 335 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 TBC1D8BQ0IIM8 1120 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 TRIM28Q13263 835 aaKnown RBP2.93□□□□□ -1.94
PRPF39-208ENST00000554785 TMEM164Q5U3C3 297 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 IER5Q5VY09 327 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 KRT25Q7Z3Z0 450 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 ACIN1Q9UKV3 1341 aaKnown RBP2.93□□□□□ -1.94
PRPF39-208ENST00000554785 COL17A1Q9UMD9 1497 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-208ENST00000554785 FOXO3O43524 673 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 SASH3O75995 380 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 MICAL2O94851 1124 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 FOXD4L6Q3SYB3 417 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-208ENST00000554785 FOXD4L3Q6VB84 417 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-208ENST00000554785 ETFBKMTQ8IXQ9 262 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 NUDT8Q8WV74 236 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 IFT43Q96FT9 208 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 MYO19Q96H55 970 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 C1orf115Q9H7X2 142 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 DNAJB12Q9NXW2 375 aaKnown RBP2.93□□□□□ -1.94
PRPF39-208ENST00000554785 SLC6A14Q9UN76 642 aa2.93□□□□□ -1.94
PRPF39-208ENST00000554785 CCINQ13939 588 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 ELOAQ14241 798 aaKnown RBP2.92□□□□□ -1.94
PRPF39-208ENST00000554785 NAA30Q147X3 362 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-208ENST00000554785 GRIK4Q16099 956 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 C11orf91Q3C1V1 193 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 MKNK1Q9BUB5 465 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 UBE2OQ9C0C9 1292 aaKnown RBP2.92□□□□□ -1.94
PRPF39-208ENST00000554785 EFCC1Q9HA90 598 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 TPSG1Q9NRR2 321 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-208ENST00000554785 ZBTB39O15060 712 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 ATG7O95352 703 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 AFF1P51825 1210 aaKnown RBP2.92□□□□□ -1.94
PRPF39-208ENST00000554785 JAG1P78504 1218 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 MLLT1Q03111 559 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-208ENST00000554785 SWI5Q1ZZU3 235 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 ILDR2Q71H61 639 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 TREML1Q86YW5 311 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 RGL4Q8IZJ4 473 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 ARID3AQ99856 593 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 RTCBQ9Y3I0 505 aaKnown RBP2.92□□□□□ -1.94
PRPF39-208ENST00000554785 KCNMB2Q9Y691 235 aa2.92□□□□□ -1.94
PRPF39-208ENST00000554785 CARNS1A5YM72 827 aa2.91□□□□□ -1.94
PRPF39-208ENST00000554785 TNFRSF10BO14763 440 aa2.91□□□□□ -1.94
PRPF39-208ENST00000554785 ARSDP51689 593 aa2.91□□□□□ -1.94
PRPF39-208ENST00000554785 TRIP4Q15650 581 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-208ENST00000554785 HIF1AQ16665 826 aa2.91□□□□□ -1.94
PRPF39-208ENST00000554785 PRSS36Q5K4E3 855 aa2.91□□□□□ -1.94
PRPF39-208ENST00000554785 PSAPL1Q6NUJ1 521 aa2.91□□□□□ -1.94
PRPF39-208ENST00000554785 HFE2Q6ZVN8 426 aa2.91□□□□□ -1.94
PRPF39-208ENST00000554785 JPH1Q9HDC5 661 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-208ENST00000554785 LILRB5O75023 590 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 CPB1P15086 417 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 GRIK5Q16478 980 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 PERM1Q5SV97 790 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 SHISA2Q6UWI4 295 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 DHX32Q7L7V1 743 aaKnown RBP2.9□□□□□ -1.94
PRPF39-208ENST00000554785 FAM35AQ86V20 835 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 CMTR1Q8N1G2 835 aaKnown RBP2.9□□□□□ -1.94
PRPF39-208ENST00000554785 CCDC82Q8N4S0 544 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 VTI1AQ96AJ9 217 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 PNMA5Q96PV4 448 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 LPIN3Q9BQK8 851 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 CXXC1Q9P0U4 656 aaPredicted RBP2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms