RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 GIGYF2Q6Y7W6 1299 aaKnown RBP10.71□□□□□ -0.69
ACTN1-212ENST00000554158 DDX46Q7L014 1031 aaKnown RBP10.71□□□□□ -0.69
ACTN1-212ENST00000554158 GPRC5DQ9NZD1 345 aa10.71□□□□□ -0.69
ACTN1-212ENST00000554158 TSPYL4Q9UJ04 414 aa10.71□□□□□ -0.69
ACTN1-212ENST00000554158 ZNRF3Q9ULT6 936 aa10.71□□□□□ -0.69
ACTN1-212ENST00000554158 ATP6V0A2Q9Y487 856 aa10.71□□□□□ -0.69
ACTN1-212ENST00000554158 TLL2Q9Y6L7 1015 aa10.71□□□□□ -0.69
ACTN1-212ENST00000554158 UBN2Q6ZU65 1347 aa10.7□□□□□ -0.7
ACTN1-212ENST00000554158 H7C1D1 291 aa10.7□□□□□ -0.7
ACTN1-212ENST00000554158 TRAF5O00463 557 aa10.7□□□□□ -0.7
ACTN1-212ENST00000554158 EIF2S2P20042 333 aaKnown RBP10.7□□□□□ -0.7
ACTN1-212ENST00000554158 EIF4A1P60842 406 aaKnown RBP10.7□□□□□ -0.7
ACTN1-212ENST00000554158 NFE2L2Q16236 605 aa10.7□□□□□ -0.7
ACTN1-212ENST00000554158 CIAPIN1Q6FI81 312 aa10.7□□□□□ -0.7
ACTN1-212ENST00000554158 MPNDQ8N594 471 aa10.7□□□□□ -0.7
ACTN1-212ENST00000554158 RNF39Q9H2S5 420 aa10.7□□□□□ -0.7
ACTN1-212ENST00000554158 COL4A5P29400 1685 aa10.69□□□□□ -0.7
ACTN1-212ENST00000554158 CDHR2Q9BYE9 1310 aa10.69□□□□□ -0.7
ACTN1-212ENST00000554158 BBOX1O75936 387 aa10.69□□□□□ -0.7
ACTN1-212ENST00000554158 NTSR2O95665 410 aa10.69□□□□□ -0.7
ACTN1-212ENST00000554158 ZNF34Q8IZ26 560 aa10.69□□□□□ -0.7
ACTN1-212ENST00000554158 DDX60Q8IY21 1712 aaKnown RBP10.69□□□□□ -0.7
ACTN1-212ENST00000554158 SNED1Q8TER0 1413 aa10.68□□□□□ -0.7
ACTN1-212ENST00000554158 ABCC4O15439 1325 aa10.68□□□□□ -0.7
ACTN1-212ENST00000554158 GMPSP49915 693 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-212ENST00000554158 FMR1Q06787 632 aaKnown RBP eCLIP10.68□□□□□ -0.75e-6■■■■□ 22.9
ACTN1-212ENST00000554158 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
ACTN1-212ENST00000554158 CXCL9Q07325 125 aa10.68□□□□□ -0.7
ACTN1-212ENST00000554158 LMOD3Q0VAK6 560 aa10.68□□□□□ -0.7
ACTN1-212ENST00000554158 CST9Q5W186 159 aa10.68□□□□□ -0.7
ACTN1-212ENST00000554158 CDC37L1Q7L3B6 337 aa10.68□□□□□ -0.7
ACTN1-212ENST00000554158 TMC4Q7Z404 712 aa10.68□□□□□ -0.7
ACTN1-212ENST00000554158 ZC3H15Q8WU90 426 aaKnown RBP10.68□□□□□ -0.7
ACTN1-212ENST00000554158 TSKSQ9UJT2 592 aa10.68□□□□□ -0.7
ACTN1-212ENST00000554158 G3V3G9 751 aa10.67□□□□□ -0.7
ACTN1-212ENST00000554158 AOC2O75106 756 aa10.67□□□□□ -0.7
ACTN1-212ENST00000554158 RAD17O75943 681 aa10.67□□□□□ -0.7
ACTN1-212ENST00000554158 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-212ENST00000554158 AIMP1Q12904 312 aaKnown RBP10.67□□□□□ -0.7
ACTN1-212ENST00000554158 DCAF8Q5TAQ9 597 aa10.67□□□□□ -0.7
ACTN1-212ENST00000554158 SAPCD2Q86UD0 394 aa10.67□□□□□ -0.7
ACTN1-212ENST00000554158 SP8Q8IXZ3 490 aa10.67□□□□□ -0.7
ACTN1-212ENST00000554158 HHIPL1Q96JK4 782 aa10.67□□□□□ -0.7
ACTN1-212ENST00000554158 THUMPD2Q9BTF0 503 aaKnown RBP10.67□□□□□ -0.7
ACTN1-212ENST00000554158 GLIS2Q9BZE0 524 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-212ENST00000554158 TRMT112Q9UI30 125 aaKnown RBP10.67□□□□□ -0.7
ACTN1-212ENST00000554158 SH3TC1Q8TE82 1336 aa10.66□□□□□ -0.7
ACTN1-212ENST00000554158 KIAA2012Q0VF49 1180 aa10.66□□□□□ -0.7
ACTN1-212ENST00000554158 NOGQ13253 232 aa10.66□□□□□ -0.7
ACTN1-212ENST00000554158 SLC10A5Q5PT55 438 aa10.66□□□□□ -0.7
ACTN1-212ENST00000554158 SPOCK2Q92563 424 aa10.66□□□□□ -0.7
ACTN1-212ENST00000554158 CNOT7Q9UIV1 285 aaKnown RBP10.66□□□□□ -0.7
ACTN1-212ENST00000554158 HCLS1P14317 486 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-212ENST00000554158 HUNKP57058 714 aa10.65□□□□□ -0.7
ACTN1-212ENST00000554158 DGKZQ13574 1117 aa10.65□□□□□ -0.7
ACTN1-212ENST00000554158 GRAPQ13588 217 aa10.65□□□□□ -0.7
ACTN1-212ENST00000554158 C3orf67Q6ZVT6 689 aa10.65□□□□□ -0.7
ACTN1-212ENST00000554158 GRAPLQ8TC17 118 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-212ENST00000554158 NECTIN2Q92692 538 aa10.65□□□□□ -0.7
ACTN1-212ENST00000554158 RTFDC1Q9BY42 306 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-212ENST00000554158 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-212ENST00000554158 PDE4DIPQ5VU43 2346 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 C6orf229H3BNL8 230 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 RIPK4P57078 832 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 WASHC4Q2M389 1173 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 MICALL2Q8IY33 904 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 C2orf69Q8N8R5 385 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 DCPSQ96C86 337 aaKnown RBP10.64□□□□□ -0.71
ACTN1-212ENST00000554158 EYA3Q99504 573 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 MCOLN1Q9GZU1 580 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 BABAM1Q9NWV8 329 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 LRRC37AA6NMS7 1700 aa10.64□□□□□ -0.71
ACTN1-212ENST00000554158 SLC34A2O95436 690 aa10.63□□□□□ -0.71
ACTN1-212ENST00000554158 ANXA1P04083 346 aa10.63□□□□□ -0.71
ACTN1-212ENST00000554158 HSP90B1P14625 803 aaKnown RBP10.63□□□□□ -0.71
ACTN1-212ENST00000554158 TCIRG1Q13488 830 aa10.63□□□□□ -0.71
ACTN1-212ENST00000554158 KRT26Q7Z3Y9 468 aa10.63□□□□□ -0.71
ACTN1-212ENST00000554158 USP48Q86UV5 1035 aa10.63□□□□□ -0.71
ACTN1-212ENST00000554158 NLRP10Q86W26 655 aa10.63□□□□□ -0.71
ACTN1-212ENST00000554158 XAGE3Q8WTP9 111 aa10.63□□□□□ -0.71
ACTN1-212ENST00000554158 PLEKHF1Q96S99 279 aa10.63□□□□□ -0.71
ACTN1-212ENST00000554158 NSFL1CQ9UNZ2 370 aaKnown RBP10.63□□□□□ -0.71
ACTN1-212ENST00000554158 LAS1LQ9Y4W2 734 aaKnown RBP10.63□□□□□ -0.71
ACTN1-212ENST00000554158 RIMBP2O15034 1052 aa10.62□□□□□ -0.71
ACTN1-212ENST00000554158 RBM26Q5T8P6 1007 aaKnown RBP10.62□□□□□ -0.71
ACTN1-212ENST00000554158 RGMBQ6NW40 437 aa10.62□□□□□ -0.71
ACTN1-212ENST00000554158 TRPM4Q8TD43 1214 aa10.62□□□□□ -0.71
ACTN1-212ENST00000554158 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
ACTN1-212ENST00000554158 PGAP2Q9UHJ9 254 aa10.62□□□□□ -0.71
ACTN1-212ENST00000554158 RPS12P25398 132 aaKnown RBP10.61□□□□□ -0.71
ACTN1-212ENST00000554158 RGS19P49795 217 aa10.61□□□□□ -0.71
ACTN1-212ENST00000554158 ZNF157P51786 506 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-212ENST00000554158 NEUROD2Q15784 382 aa10.61□□□□□ -0.71
ACTN1-212ENST00000554158 PROSER3Q2NL68 480 aa10.61□□□□□ -0.71
ACTN1-212ENST00000554158 TBC1D10BQ4KMP7 808 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-212ENST00000554158 SLC51AQ86UW1 340 aa10.61□□□□□ -0.71
ACTN1-212ENST00000554158 SULF1Q8IWU6 871 aa10.61□□□□□ -0.71
ACTN1-212ENST00000554158 BBXQ8WY36 941 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-212ENST00000554158 DPF2Q92785 391 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms