RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
SIX4-202ENST00000554079 SCRN1Q12765 414 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 MRPL50Q8N5N7 158 aaKnown RBP11.11□□□□□ -0.63
SIX4-202ENST00000554079 PLEKHA4Q9H4M7 779 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 SLC24A3Q9HC58 644 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 DDX19AQ9NUU7 478 aaKnown RBP11.11□□□□□ -0.63
SIX4-202ENST00000554079 CCDC151A5D8V7 595 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 NEBLO76041 1014 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 GCFC2P16383 781 aaKnown RBP11.11□□□□□ -0.63
SIX4-202ENST00000554079 LIG3P49916 1009 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 TBC1D8BQ0IIM8 1120 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 NEDD9Q14511 834 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 MORC1Q86VD1 984 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 TEX11Q8IYF3 940 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 PLEKHF1Q96S99 279 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 DACT1Q9NYF0 836 aa11.11□□□□□ -0.63
SIX4-202ENST00000554079 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
SIX4-202ENST00000554079 KIF24Q5T7B8 1368 aa11.1□□□□□ -0.63
SIX4-202ENST00000554079 EXOC5O00471 708 aa11.1□□□□□ -0.63
SIX4-202ENST00000554079 MPHOSPH10O00566 681 aaKnown RBP11.1□□□□□ -0.63
SIX4-202ENST00000554079 N4BP1O75113 896 aaKnown RBP11.1□□□□□ -0.63
SIX4-202ENST00000554079 DDR1Q08345 913 aa11.1□□□□□ -0.63
SIX4-202ENST00000554079 GRIK3Q13003 919 aa11.1□□□□□ -0.63
SIX4-202ENST00000554079 BRD3Q15059 726 aa11.1□□□□□ -0.63
SIX4-202ENST00000554079 JAKMIP3Q5VZ66 844 aa11.1□□□□□ -0.63
SIX4-202ENST00000554079 OTUD6BQ8N6M0 293 aa11.1□□□□□ -0.63
SIX4-202ENST00000554079 CNNM3Q8NE01 707 aa11.1□□□□□ -0.63
SIX4-202ENST00000554079 RABGGTAQ92696 567 aa11.1□□□□□ -0.63
SIX4-202ENST00000554079 MTHFSP49914 203 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 C11orf57Q6ZUT1 292 aaPredicted RBP11.09□□□□□ -0.63
SIX4-202ENST00000554079 PRPF38AQ8NAV1 312 aaKnown RBP11.09□□□□□ -0.63
SIX4-202ENST00000554079 FAM210AQ96ND0 272 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 BICC1Q9H694 974 aaKnown RBP11.09□□□□□ -0.63
SIX4-202ENST00000554079 SETD1BQ9UPS6 1966 aaKnown RBP11.09□□□□□ -0.63
SIX4-202ENST00000554079 ATP10BO94823 1461 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 COL3A1P02461 1466 aaPredicted RBP11.09□□□□□ -0.63
SIX4-202ENST00000554079 URI1O94763 535 aaPredicted RBP11.09□□□□□ -0.63
SIX4-202ENST00000554079 ADCY2Q08462 1091 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 PREPLQ4J6C6 727 aaPredicted RBP11.09□□□□□ -0.63
SIX4-202ENST00000554079 VPS53Q5VIR6 699 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 ARMCX5Q6P1M9 558 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 FMNL3Q8IVF7 1028 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 HNRNPLLQ8WVV9 542 aaKnown RBP11.09□□□□□ -0.63
SIX4-202ENST00000554079 CFAP53Q96M91 514 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 TTC14Q96N46 770 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 JPH2Q9BR39 696 aaPredicted RBP11.09□□□□□ -0.63
SIX4-202ENST00000554079 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 OSBPL3Q9H4L5 887 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 ETAA1Q9NY74 926 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 IMPACTQ9P2X3 320 aa11.09□□□□□ -0.63
SIX4-202ENST00000554079 GOLGA6L19H0YKK7 550 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 BEND6Q5SZJ8 279 aaPredicted RBP11.08□□□□□ -0.64
SIX4-202ENST00000554079 ANKRD44Q8N8A2 993 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 CCDC150Q8NCX0 1101 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 FAM71BQ8TC56 605 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 N4BP2L2Q92802 583 aaPredicted RBP11.08□□□□□ -0.64
SIX4-202ENST00000554079 CLIC6Q96NY7 704 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 SMC3Q9UQE7 1217 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 CHMP3Q9Y3E7 222 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 PTPRTO14522 1441 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 MAST1Q9Y2H9 1570 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 ADGRL3Q9HAR2 1447 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 CTAGE5O15320 804 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 RTN2O75298 545 aa11.08□□□□□ -0.64
SIX4-202ENST00000554079 U2AF1L5P0DN76 240 aaPredicted RBP11.08□□□□□ -0.64
SIX4-202ENST00000554079 U2AF1Q01081 240 aaKnown RBP eCLIP11.08□□□□□ -0.64
SIX4-202ENST00000554079 USP5P45974 858 aa11.07□□□□□ -0.64
SIX4-202ENST00000554079 MRPL12P52815 198 aaKnown RBP11.07□□□□□ -0.64
SIX4-202ENST00000554079 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
SIX4-202ENST00000554079 PPP2R3AQ06190 1150 aa11.07□□□□□ -0.64
SIX4-202ENST00000554079 CRYMQ14894 314 aa11.07□□□□□ -0.64
SIX4-202ENST00000554079 HDXQ7Z353 690 aa11.07□□□□□ -0.64
SIX4-202ENST00000554079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.07□□□□□ -0.64
SIX4-202ENST00000554079 DHX40Q8IX18 779 aaKnown RBP11.07□□□□□ -0.64
SIX4-202ENST00000554079 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
SIX4-202ENST00000554079 ZKSCAN4Q969J2 545 aaPredicted RBP11.07□□□□□ -0.64
SIX4-202ENST00000554079 UTP14AQ9BVJ6 771 aaKnown RBP11.07□□□□□ -0.64
SIX4-202ENST00000554079 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
SIX4-202ENST00000554079 MRFAP1Q9Y605 127 aa11.07□□□□□ -0.64
SIX4-202ENST00000554079 SOS1Q07889 1333 aaPredicted RBP11.06□□□□□ -0.64
SIX4-202ENST00000554079 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 EIF3JO75822 258 aaKnown RBP11.06□□□□□ -0.64
SIX4-202ENST00000554079 TXLNAP40222 546 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 CCNHP51946 323 aaPredicted RBP11.06□□□□□ -0.64
SIX4-202ENST00000554079 KRT85P78386 507 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 PSME1Q06323 249 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 RUFY3Q7L099 469 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 POTEDQ86YR6 584 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 ZNF483Q8TF39 744 aaPredicted RBP11.06□□□□□ -0.64
SIX4-202ENST00000554079 XAGE2Q96GT9 111 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 NEURL4Q96JN8 1562 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 ANKRD26Q9UPS8 1709 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 NPHP3Q7Z494 1330 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 TMCO5BA8MYB1 307 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 CCP110O43303 1012 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 IFIT2P09913 472 aaKnown RBP11.06□□□□□ -0.64
SIX4-202ENST00000554079 GJB2P29033 226 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 OS9Q13438 667 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms