RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ABCC4O15439 1325 aa10.18□□□□□ -0.78
ABCD4-220ENST00000553998 TCERG1O14776 1098 aaKnown RBP10.18□□□□□ -0.78
ABCD4-220ENST00000553998 U2AF1L5P0DN76 240 aaPredicted RBP10.18□□□□□ -0.78
ABCD4-220ENST00000553998 GPTP24298 496 aa10.18□□□□□ -0.78
ABCD4-220ENST00000553998 HUNKP57058 714 aa10.18□□□□□ -0.78
ABCD4-220ENST00000553998 U2AF1Q01081 240 aaKnown RBP eCLIP10.18□□□□□ -0.78
ABCD4-220ENST00000553998 DPP8Q6V1X1 898 aaPredicted RBP10.18□□□□□ -0.78
ABCD4-220ENST00000553998 MPNDQ8N594 471 aa10.18□□□□□ -0.78
ABCD4-220ENST00000553998 NGEFQ8N5V2 710 aa10.18□□□□□ -0.78
ABCD4-220ENST00000553998 TRPM4Q8TD43 1214 aa10.18□□□□□ -0.78
ABCD4-220ENST00000553998 CCDC102AQ96A19 550 aa10.18□□□□□ -0.78
ABCD4-220ENST00000553998 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
ABCD4-220ENST00000553998 CNOT7Q9UIV1 285 aaKnown RBP10.18□□□□□ -0.78
ABCD4-220ENST00000553998 RRP7AQ9Y3A4 280 aaKnown RBP10.18□□□□□ -0.78
ABCD4-220ENST00000553998 DLG5Q8TDM6 1919 aa10.17□□□□□ -0.78
ABCD4-220ENST00000553998 YDJCA8MPS7 323 aa10.17□□□□□ -0.78
ABCD4-220ENST00000553998 H7C1D1 291 aa10.17□□□□□ -0.78
ABCD4-220ENST00000553998 RGMBQ6NW40 437 aa10.17□□□□□ -0.78
ABCD4-220ENST00000553998 USP48Q86UV5 1035 aa10.17□□□□□ -0.78
ABCD4-220ENST00000553998 UTP14AQ9BVJ6 771 aaKnown RBP10.17□□□□□ -0.78
ABCD4-220ENST00000553998 ZBTB3Q9H5J0 574 aa10.17□□□□□ -0.78
ABCD4-220ENST00000553998 RAD17O75943 681 aa10.16□□□□□ -0.78
ABCD4-220ENST00000553998 MYL6BP14649 208 aa10.16□□□□□ -0.78
ABCD4-220ENST00000553998 KIF23Q02241 960 aaPredicted RBP10.16□□□□□ -0.78
ABCD4-220ENST00000553998 PDIA6Q15084 440 aa10.16□□□□□ -0.78
ABCD4-220ENST00000553998 PRPF38BQ5VTL8 546 aaKnown RBP10.16□□□□□ -0.78
ABCD4-220ENST00000553998 TMC4Q7Z404 712 aa10.16□□□□□ -0.78
ABCD4-220ENST00000553998 BCL2L13Q9BXK5 485 aa10.16□□□□□ -0.78
ABCD4-220ENST00000553998 ZNF408Q9H9D4 720 aa10.16□□□□□ -0.78
ABCD4-220ENST00000553998 RNF186Q9NXI6 227 aa10.16□□□□□ -0.78
ABCD4-220ENST00000553998 TRPM7Q96QT4 1865 aa10.16□□□□□ -0.78
ABCD4-220ENST00000553998 SHTN1A0MZ66 631 aa10.15□□□□□ -0.78
ABCD4-220ENST00000553998 MICALL2Q8IY33 904 aa10.15□□□□□ -0.78
ABCD4-220ENST00000553998 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
ABCD4-220ENST00000553998 GBA2Q9HCG7 927 aaPredicted RBP10.15□□□□□ -0.78
ABCD4-220ENST00000553998 RPS12P25398 132 aaKnown RBP10.14□□□□□ -0.79
ABCD4-220ENST00000553998 GRAPQ13588 217 aa10.14□□□□□ -0.79
ABCD4-220ENST00000553998 DIEXFQ68CQ4 756 aaKnown RBP10.14□□□□□ -0.79
ABCD4-220ENST00000553998 DLK2Q6UY11 383 aa10.14□□□□□ -0.79
ABCD4-220ENST00000553998 C2orf69Q8N8R5 385 aa10.14□□□□□ -0.79
ABCD4-220ENST00000553998 GRAPLQ8TC17 118 aaPredicted RBP10.14□□□□□ -0.79
ABCD4-220ENST00000553998 CSRNP1Q96S65 589 aa10.14□□□□□ -0.79
ABCD4-220ENST00000553998 PSMD14O00487 310 aa10.13□□□□□ -0.79
ABCD4-220ENST00000553998 TRPA1O75762 1119 aa10.13□□□□□ -0.79
ABCD4-220ENST00000553998 SLC10A3P09131 477 aa10.13□□□□□ -0.79
ABCD4-220ENST00000553998 ZNF157P51786 506 aaPredicted RBP10.13□□□□□ -0.79
ABCD4-220ENST00000553998 SOX10P56693 466 aa10.13□□□□□ -0.79
ABCD4-220ENST00000553998 HSP90AB3PQ58FF7 597 aa10.13□□□□□ -0.79
ABCD4-220ENST00000553998 DDX46Q7L014 1031 aaKnown RBP10.13□□□□□ -0.79
ABCD4-220ENST00000553998 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
ABCD4-220ENST00000553998 KRT26Q7Z3Y9 468 aa10.13□□□□□ -0.79
ABCD4-220ENST00000553998 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
ABCD4-220ENST00000553998 NLRP10Q86W26 655 aa10.13□□□□□ -0.79
ABCD4-220ENST00000553998 PLEKHF1Q96S99 279 aa10.13□□□□□ -0.79
ABCD4-220ENST00000553998 ZBTB12Q9Y330 459 aaPredicted RBP10.13□□□□□ -0.79
ABCD4-220ENST00000553998 PDE4DIPQ5VU43 2346 aa10.12□□□□□ -0.79
ABCD4-220ENST00000553998 LAMB4A4D0S4 1761 aa10.12□□□□□ -0.79
ABCD4-220ENST00000553998 EGFRP00533 1210 aa10.12□□□□□ -0.79
ABCD4-220ENST00000553998 HCLS1P14317 486 aaPredicted RBP10.12□□□□□ -0.79
ABCD4-220ENST00000553998 TCIRG1Q13488 830 aa10.12□□□□□ -0.79
ABCD4-220ENST00000553998 PKN2Q16513 984 aaKnown RBP10.12□□□□□ -0.79
ABCD4-220ENST00000553998 WASHC4Q2M389 1173 aa10.12□□□□□ -0.79
ABCD4-220ENST00000553998 DCPSQ96C86 337 aaKnown RBP10.12□□□□□ -0.79
ABCD4-220ENST00000553998 BABAM1Q9NWV8 329 aa10.12□□□□□ -0.79
ABCD4-220ENST00000553998 CASP8AP2Q9UKL3 1982 aa10.12□□□□□ -0.79
ABCD4-220ENST00000553998 VIL1P09327 827 aaKnown RBP10.11□□□□□ -0.79
ABCD4-220ENST00000553998 SF3B3Q15393 1217 aaKnown RBP10.11□□□□□ -0.79
ABCD4-220ENST00000553998 NFE2L2Q16236 605 aa10.11□□□□□ -0.79
ABCD4-220ENST00000553998 TBC1D10BQ4KMP7 808 aaPredicted RBP10.11□□□□□ -0.79
ABCD4-220ENST00000553998 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
ABCD4-220ENST00000553998 SH3TC1Q8TE82 1336 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 DUOX1Q9NRD9 1551 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 NUP98P52948 1817 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 ADM5C9JUS6 153 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 FKBP1BP68106 108 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 PROSER3Q2NL68 480 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 THUMPD2Q9BTF0 503 aaKnown RBP10.1□□□□□ -0.79
ABCD4-220ENST00000553998 POLLQ9UGP5 575 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 TRMT112Q9UI30 125 aaKnown RBP10.1□□□□□ -0.79
ABCD4-220ENST00000553998 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 KDM3BQ7LBC6 1761 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 RTL9Q8NET4 1388 aa10.1□□□□□ -0.79
ABCD4-220ENST00000553998 CCER2I3L3R5 266 aa10.09□□□□□ -0.79
ABCD4-220ENST00000553998 ZNF280AP59817 542 aaPredicted RBP10.09□□□□□ -0.79
ABCD4-220ENST00000553998 COPS6Q7L5N1 327 aa10.09□□□□□ -0.79
ABCD4-220ENST00000553998 NECTIN2Q92692 538 aa10.09□□□□□ -0.79
ABCD4-220ENST00000553998 PNNQ9H307 717 aaKnown RBP10.09□□□□□ -0.79
ABCD4-220ENST00000553998 DBNDD1Q9H9R9 158 aa10.09□□□□□ -0.79
ABCD4-220ENST00000553998 KCNQ5Q9NR82 932 aa10.09□□□□□ -0.79
ABCD4-220ENST00000553998 NSFL1CQ9UNZ2 370 aaKnown RBP10.09□□□□□ -0.79
ABCD4-220ENST00000553998 ZNF609O15014 1411 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 ECE2O60344 883 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 NEFMP07197 916 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 EIF2S2P20042 333 aaKnown RBP10.08□□□□□ -0.8
ABCD4-220ENST00000553998 GPSM2P81274 684 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 WDR43Q15061 677 aaKnown RBP eCLIP10.08□□□□□ -0.8
ABCD4-220ENST00000553998 KIF4BQ2VIQ3 1234 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 RASAL3Q86YV0 1011 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 SULF1Q8IWU6 871 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 XAGE3Q8WTP9 111 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms