RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 COL4A5P29400 1685 aa8.77□□□□□ -1.01
GPHN-206ENST00000553936 MAP3K15Q6ZN16 1313 aa8.77□□□□□ -1.01
GPHN-206ENST00000553936 BBOX1O75936 387 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 PRKAR2BP31323 418 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 KIF23Q02241 960 aaPredicted RBP8.76□□□□□ -1.01
GPHN-206ENST00000553936 KIAA2012Q0VF49 1180 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 PARP10Q53GL7 1025 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 CC2D1BQ5T0F9 858 aaKnown RBP8.76□□□□□ -1.01
GPHN-206ENST00000553936 KRT26Q7Z3Y9 468 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 USP48Q86UV5 1035 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 MPNDQ8N594 471 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 NGEFQ8N5V2 710 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 RNF186Q9NXI6 227 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 HDAC9Q9UKV0 1011 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 NUDCQ9Y266 331 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 CLSPNQ9HAW4 1339 aa8.76□□□□□ -1.01
GPHN-206ENST00000553936 FAM155AB1AL88 458 aaPredicted RBP8.75□□□□□ -1.01
GPHN-206ENST00000553936 HTATSF1O43719 755 aaKnown RBP8.75□□□□□ -1.01
GPHN-206ENST00000553936 RAD17O75943 681 aa8.75□□□□□ -1.01
GPHN-206ENST00000553936 NEFMP07197 916 aa8.75□□□□□ -1.01
GPHN-206ENST00000553936 GPTP24298 496 aa8.75□□□□□ -1.01
GPHN-206ENST00000553936 SP8Q8IXZ3 490 aa8.75□□□□□ -1.01
GPHN-206ENST00000553936 MICALL2Q8IY33 904 aa8.75□□□□□ -1.01
GPHN-206ENST00000553936 PNISRQ8TF01 805 aaKnown RBP8.75□□□□□ -1.01
GPHN-206ENST00000553936 DPF2Q92785 391 aa8.75□□□□□ -1.01
GPHN-206ENST00000553936 SLC10A3P09131 477 aa8.74□□□□□ -1.01
GPHN-206ENST00000553936 RPS12P25398 132 aaKnown RBP8.74□□□□□ -1.01
GPHN-206ENST00000553936 HIRAP54198 1017 aaPredicted RBP8.74□□□□□ -1.01
GPHN-206ENST00000553936 TAF7Q15545 349 aaPredicted RBP8.74□□□□□ -1.01
GPHN-206ENST00000553936 SUSD4Q5VX71 490 aa8.74□□□□□ -1.01
GPHN-206ENST00000553936 MCM10Q7L590 875 aa8.74□□□□□ -1.01
GPHN-206ENST00000553936 TMC4Q7Z404 712 aa8.74□□□□□ -1.01
GPHN-206ENST00000553936 SULF1Q8IWU6 871 aa8.74□□□□□ -1.01
GPHN-206ENST00000553936 TRPM4Q8TD43 1214 aa8.74□□□□□ -1.01
GPHN-206ENST00000553936 ZIC5Q96T25 663 aa8.74□□□□□ -1.01
GPHN-206ENST00000553936 HPS5Q9UPZ3 1129 aa8.74□□□□□ -1.01
GPHN-206ENST00000553936 NTSR2O95665 410 aa8.73□□□□□ -1.01
GPHN-206ENST00000553936 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
GPHN-206ENST00000553936 DDX46Q7L014 1031 aaKnown RBP8.73□□□□□ -1.01
GPHN-206ENST00000553936 ZNF34Q8IZ26 560 aa8.73□□□□□ -1.01
GPHN-206ENST00000553936 PHACTR3Q96KR7 559 aa8.73□□□□□ -1.01
GPHN-206ENST00000553936 UTP14AQ9BVJ6 771 aaKnown RBP8.73□□□□□ -1.01
GPHN-206ENST00000553936 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
GPHN-206ENST00000553936 ZBTB3Q9H5J0 574 aa8.73□□□□□ -1.01
GPHN-206ENST00000553936 RRP7AQ9Y3A4 280 aaKnown RBP8.73□□□□□ -1.01
GPHN-206ENST00000553936 ABCC4O15439 1325 aa8.73□□□□□ -1.01
GPHN-206ENST00000553936 UBN2Q6ZU65 1347 aa8.73□□□□□ -1.01
GPHN-206ENST00000553936 COL3A1P02461 1466 aaPredicted RBP8.72□□□□□ -1.01
GPHN-206ENST00000553936 MYL6BP14649 208 aa8.72□□□□□ -1.01
GPHN-206ENST00000553936 FKBP1BP68106 108 aa8.72□□□□□ -1.01
GPHN-206ENST00000553936 HSP90AB3PQ58FF7 597 aa8.72□□□□□ -1.01
GPHN-206ENST00000553936 SLC10A5Q5PT55 438 aa8.72□□□□□ -1.01
GPHN-206ENST00000553936 CSRNP1Q96S65 589 aa8.72□□□□□ -1.01
GPHN-206ENST00000553936 ERBB4Q15303 1308 aa8.72□□□□□ -1.01
GPHN-206ENST00000553936 U2AF1L5P0DN76 240 aaPredicted RBP8.71□□□□□ -1.02
GPHN-206ENST00000553936 U2AF1Q01081 240 aaKnown RBP eCLIP8.71□□□□□ -1.02
GPHN-206ENST00000553936 GRAPQ13588 217 aa8.71□□□□□ -1.02
GPHN-206ENST00000553936 WASHC4Q2M389 1173 aa8.71□□□□□ -1.02
GPHN-206ENST00000553936 TBC1D10BQ4KMP7 808 aaPredicted RBP8.71□□□□□ -1.02
GPHN-206ENST00000553936 FBXO46Q6PJ61 603 aaPredicted RBP8.71□□□□□ -1.02
GPHN-206ENST00000553936 TTLL7Q6ZT98 887 aa8.71□□□□□ -1.02
GPHN-206ENST00000553936 SAMD7Q7Z3H4 446 aa8.71□□□□□ -1.02
GPHN-206ENST00000553936 GRAPLQ8TC17 118 aaPredicted RBP8.71□□□□□ -1.02
GPHN-206ENST00000553936 EYA3Q99504 573 aa8.71□□□□□ -1.02
GPHN-206ENST00000553936 TNRC18O15417 2968 aaPredicted RBP8.71□□□□□ -1.02
GPHN-206ENST00000553936 PDE4DIPQ5VU43 2346 aa8.71□□□□□ -1.02
GPHN-206ENST00000553936 LAMB4A4D0S4 1761 aa8.71□□□□□ -1.02
GPHN-206ENST00000553936 AKAP11Q9UKA4 1901 aa8.7□□□□□ -1.02
GPHN-206ENST00000553936 SPDYE4A6NLX3 237 aa8.7□□□□□ -1.02
GPHN-206ENST00000553936 YDJCA8MPS7 323 aa8.7□□□□□ -1.02
GPHN-206ENST00000553936 ADM5C9JUS6 153 aa8.7□□□□□ -1.02
GPHN-206ENST00000553936 PSMD14O00487 310 aa8.7□□□□□ -1.02
GPHN-206ENST00000553936 PER1O15534 1290 aaPredicted RBP8.7□□□□□ -1.02
GPHN-206ENST00000553936 DCTN1Q14203 1278 aa8.7□□□□□ -1.02
GPHN-206ENST00000553936 KIF4BQ2VIQ3 1234 aa8.7□□□□□ -1.02
GPHN-206ENST00000553936 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
GPHN-206ENST00000553936 RBM26Q5T8P6 1007 aaKnown RBP8.7□□□□□ -1.02
GPHN-206ENST00000553936 NUP98P52948 1817 aa8.69□□□□□ -1.02
GPHN-206ENST00000553936 G3V3G9 751 aa8.69□□□□□ -1.02
GPHN-206ENST00000553936 HABP4Q5JVS0 413 aaKnown RBP8.69□□□□□ -1.02
GPHN-206ENST00000553936 DCAF8Q5TAQ9 597 aa8.69□□□□□ -1.02
GPHN-206ENST00000553936 INTS3Q68E01 1043 aaKnown RBP8.69□□□□□ -1.02
GPHN-206ENST00000553936 C3orf67Q6ZVT6 689 aa8.69□□□□□ -1.02
GPHN-206ENST00000553936 RASAL3Q86YV0 1011 aa8.69□□□□□ -1.02
GPHN-206ENST00000553936 ZNF296Q8WUU4 475 aaPredicted RBP8.69□□□□□ -1.02
GPHN-206ENST00000553936 CDCA5Q96FF9 252 aa8.69□□□□□ -1.02
GPHN-206ENST00000553936 GGA3Q9NZ52 723 aa8.69□□□□□ -1.02
GPHN-206ENST00000553936 NSFL1CQ9UNZ2 370 aaKnown RBP8.69□□□□□ -1.02
GPHN-206ENST00000553936 SHTN1A0MZ66 631 aa8.68□□□□□ -1.02
GPHN-206ENST00000553936 C6orf229H3BNL8 230 aa8.68□□□□□ -1.02
GPHN-206ENST00000553936 EIF4A1P60842 406 aaKnown RBP8.68□□□□□ -1.02
GPHN-206ENST00000553936 SREBF2Q12772 1141 aa8.68□□□□□ -1.02
GPHN-206ENST00000553936 CNGB1Q14028 1251 aaPredicted RBP8.68□□□□□ -1.02
GPHN-206ENST00000553936 NECTIN2Q92692 538 aa8.68□□□□□ -1.02
GPHN-206ENST00000553936 DBNDD1Q9H9R9 158 aa8.68□□□□□ -1.02
GPHN-206ENST00000553936 MIS18AQ9NYP9 233 aa8.68□□□□□ -1.02
GPHN-206ENST00000553936 TRMT112Q9UI30 125 aaKnown RBP8.68□□□□□ -1.02
GPHN-206ENST00000553936 SH3TC1Q8TE82 1336 aa8.68□□□□□ -1.02
GPHN-206ENST00000553936 GPR25O00155 361 aa8.67□□□□□ -1.02
GPHN-206ENST00000553936 ECE2O60344 883 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms