RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
CHD8-205ENST00000553651 SLC10A3P09131 477 aa12.87□□□□□ -0.35
CHD8-205ENST00000553651 TNIP1Q15025 636 aa12.87□□□□□ -0.35
CHD8-205ENST00000553651 TAF7Q15545 349 aaPredicted RBP12.87□□□□□ -0.35
CHD8-205ENST00000553651 GIGYF2Q6Y7W6 1299 aaKnown RBP12.87□□□□□ -0.35
CHD8-205ENST00000553651 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
CHD8-205ENST00000553651 CTU1Q7Z7A3 348 aaKnown RBP12.87□□□□□ -0.35
CHD8-205ENST00000553651 SP8Q8IXZ3 490 aa12.87□□□□□ -0.35
CHD8-205ENST00000553651 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
CHD8-205ENST00000553651 CSRNP1Q96S65 589 aa12.87□□□□□ -0.35
CHD8-205ENST00000553651 BCL2L13Q9BXK5 485 aa12.87□□□□□ -0.35
CHD8-205ENST00000553651 ZBTB3Q9H5J0 574 aa12.87□□□□□ -0.35
CHD8-205ENST00000553651 GBA2Q9HCG7 927 aaPredicted RBP12.87□□□□□ -0.35
CHD8-205ENST00000553651 ANKRD36CQ5JPF3 1778 aa12.86□□□□□ -0.35
CHD8-205ENST00000553651 LRRC37AA6NMS7 1700 aa12.86□□□□□ -0.35
CHD8-205ENST00000553651 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
CHD8-205ENST00000553651 SAMD7Q7Z3H4 446 aa12.86□□□□□ -0.35
CHD8-205ENST00000553651 DPF2Q92785 391 aa12.86□□□□□ -0.35
CHD8-205ENST00000553651 CCDC102AQ96A19 550 aa12.86□□□□□ -0.35
CHD8-205ENST00000553651 HPS5Q9UPZ3 1129 aa12.86□□□□□ -0.35
CHD8-205ENST00000553651 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
CHD8-205ENST00000553651 MKI67P46013 3256 aaKnown RBP12.86□□□□□ -0.35
CHD8-205ENST00000553651 TAF1P21675 1872 aa12.85□□□□□ -0.35
CHD8-205ENST00000553651 ADM5C9JUS6 153 aa12.85□□□□□ -0.35
CHD8-205ENST00000553651 EIF4A1P60842 406 aaKnown RBP12.85□□□□□ -0.35
CHD8-205ENST00000553651 KIF6Q6ZMV9 814 aa12.85□□□□□ -0.35
CHD8-205ENST00000553651 KRT26Q7Z3Y9 468 aa12.85□□□□□ -0.35
CHD8-205ENST00000553651 MPNDQ8N594 471 aa12.85□□□□□ -0.35
CHD8-205ENST00000553651 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
CHD8-205ENST00000553651 NLRP3Q96P20 1036 aa12.85□□□□□ -0.35
CHD8-205ENST00000553651 RRP7AQ9Y3A4 280 aaKnown RBP12.85□□□□□ -0.35
CHD8-205ENST00000553651 HTTP42858 3142 aa12.85□□□□□ -0.35
CHD8-205ENST00000553651 H7C1D1 291 aa12.84□□□□□ -0.35
CHD8-205ENST00000553651 PSMD14O00487 310 aa12.84□□□□□ -0.35
CHD8-205ENST00000553651 BBOX1O75936 387 aa12.84□□□□□ -0.35
CHD8-205ENST00000553651 MYL6BP14649 208 aa12.84□□□□□ -0.35
CHD8-205ENST00000553651 ZNF157P51786 506 aaPredicted RBP12.84□□□□□ -0.35
CHD8-205ENST00000553651 TBC1D10BQ4KMP7 808 aaPredicted RBP12.84□□□□□ -0.35
CHD8-205ENST00000553651 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
CHD8-205ENST00000553651 C2orf69Q8N8R5 385 aa12.84□□□□□ -0.35
CHD8-205ENST00000553651 PPP1R42Q7Z4L9 355 aa12.83□□□□□ -0.36
CHD8-205ENST00000553651 COL4A1P02462 1669 aa12.83□□□□□ -0.36
CHD8-205ENST00000553651 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
CHD8-205ENST00000553651 PDIA6Q15084 440 aa12.82□□□□□ -0.36
CHD8-205ENST00000553651 RASAL3Q86YV0 1011 aa12.82□□□□□ -0.36
CHD8-205ENST00000553651 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
CHD8-205ENST00000553651 KCNQ5Q9NR82 932 aa12.82□□□□□ -0.36
CHD8-205ENST00000553651 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
CHD8-205ENST00000553651 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
CHD8-205ENST00000553651 SCN9AQ15858 1988 aa12.81□□□□□ -0.36
CHD8-205ENST00000553651 HCLS1P14317 486 aaPredicted RBP12.81□□□□□ -0.36
CHD8-205ENST00000553651 GRAPQ13588 217 aa12.81□□□□□ -0.36
CHD8-205ENST00000553651 GRAPLQ8TC17 118 aaPredicted RBP12.81□□□□□ -0.36
CHD8-205ENST00000553651 TMX4Q9H1E5 349 aaPredicted RBP12.81□□□□□ -0.36
CHD8-205ENST00000553651 U2AF1L5P0DN76 240 aaPredicted RBP12.8□□□□□ -0.36
CHD8-205ENST00000553651 U2AF1Q01081 240 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHD8-205ENST00000553651 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
CHD8-205ENST00000553651 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
CHD8-205ENST00000553651 DBNDD1Q9H9R9 158 aa12.8□□□□□ -0.36
CHD8-205ENST00000553651 ERBB4Q15303 1308 aa12.8□□□□□ -0.36
CHD8-205ENST00000553651 RPS12P25398 132 aaKnown RBP12.79□□□□□ -0.36
CHD8-205ENST00000553651 CNGB1Q14028 1251 aaPredicted RBP12.79□□□□□ -0.36
CHD8-205ENST00000553651 PKN2Q16513 984 aaKnown RBP12.79□□□□□ -0.36
CHD8-205ENST00000553651 PROSER3Q2NL68 480 aa12.79□□□□□ -0.36
CHD8-205ENST00000553651 HABP4Q5JVS0 413 aaKnown RBP12.79□□□□□ -0.36
CHD8-205ENST00000553651 NLRP10Q86W26 655 aa12.79□□□□□ -0.36
CHD8-205ENST00000553651 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
CHD8-205ENST00000553651 ZNF296Q8WUU4 475 aaPredicted RBP12.79□□□□□ -0.36
CHD8-205ENST00000553651 CDCA5Q96FF9 252 aa12.79□□□□□ -0.36
CHD8-205ENST00000553651 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
CHD8-205ENST00000553651 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
CHD8-205ENST00000553651 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
CHD8-205ENST00000553651 DDX46Q7L014 1031 aaKnown RBP12.78□□□□□ -0.36
CHD8-205ENST00000553651 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
CHD8-205ENST00000553651 CFAP53Q96M91 514 aa12.78□□□□□ -0.36
CHD8-205ENST00000553651 GGA3Q9NZ52 723 aa12.78□□□□□ -0.36
CHD8-205ENST00000553651 POLLQ9UGP5 575 aa12.78□□□□□ -0.36
CHD8-205ENST00000553651 NUDCQ9Y266 331 aa12.78□□□□□ -0.36
CHD8-205ENST00000553651 DDX60Q8IY21 1712 aaKnown RBP12.78□□□□□ -0.36
CHD8-205ENST00000553651 PAPPA2Q9BXP8 1791 aa12.78□□□□□ -0.36
CHD8-205ENST00000553651 WASHC4Q2M389 1173 aa12.77□□□□□ -0.37
CHD8-205ENST00000553651 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.37
CHD8-205ENST00000553651 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
CHD8-205ENST00000553651 GCC1Q96CN9 775 aa12.77□□□□□ -0.37
CHD8-205ENST00000553651 ZNF609O15014 1411 aa12.77□□□□□ -0.37
CHD8-205ENST00000553651 ECE2O60344 883 aa12.76□□□□□ -0.37
CHD8-205ENST00000553651 TBC1D8O95759 1140 aa12.76□□□□□ -0.37
CHD8-205ENST00000553651 ANXA1P04083 346 aa12.76□□□□□ -0.37
CHD8-205ENST00000553651 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
CHD8-205ENST00000553651 FBXO46Q6PJ61 603 aaPredicted RBP12.76□□□□□ -0.37
CHD8-205ENST00000553651 SULF1Q8IWU6 871 aa12.76□□□□□ -0.37
CHD8-205ENST00000553651 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
CHD8-205ENST00000553651 RIMBP2O15034 1052 aa12.75□□□□□ -0.37
CHD8-205ENST00000553651 PPP2R1AP30153 589 aa12.75□□□□□ -0.37
CHD8-205ENST00000553651 ZNF280AP59817 542 aaPredicted RBP12.75□□□□□ -0.37
CHD8-205ENST00000553651 FKBP1BP68106 108 aa12.75□□□□□ -0.37
CHD8-205ENST00000553651 GPSM2P81274 684 aa12.75□□□□□ -0.37
CHD8-205ENST00000553651 DOK7Q18PE1 504 aa12.75□□□□□ -0.37
CHD8-205ENST00000553651 MOB2Q70IA6 237 aa12.75□□□□□ -0.37
CHD8-205ENST00000553651 R3HDMLQ9H3Y0 253 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms