RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 SLC10A3P09131 477 aa18.48■□□□□ 0.55
PRPF39-204ENST00000553605 PRKAR2BP31323 418 aa18.48■□□□□ 0.55
PRPF39-204ENST00000553605 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
PRPF39-204ENST00000553605 TTLL7Q6ZT98 887 aa18.48■□□□□ 0.55
PRPF39-204ENST00000553605 SAMD7Q7Z3H4 446 aa18.48■□□□□ 0.55
PRPF39-204ENST00000553605 NUP98P52948 1817 aa18.48■□□□□ 0.55
PRPF39-204ENST00000553605 COL3A1P02461 1466 aaPredicted RBP18.47■□□□□ 0.55
PRPF39-204ENST00000553605 YDJCA8MPS7 323 aa18.47■□□□□ 0.55
PRPF39-204ENST00000553605 BBOX1O75936 387 aa18.47■□□□□ 0.55
PRPF39-204ENST00000553605 HABP4Q5JVS0 413 aaKnown RBP18.47■□□□□ 0.55
PRPF39-204ENST00000553605 SP8Q8IXZ3 490 aa18.47■□□□□ 0.55
PRPF39-204ENST00000553605 REM2Q8IYK8 340 aaPredicted RBP18.47■□□□□ 0.55
PRPF39-204ENST00000553605 ZNF34Q8IZ26 560 aa18.47■□□□□ 0.55
PRPF39-204ENST00000553605 DPF2Q92785 391 aa18.47■□□□□ 0.55
PRPF39-204ENST00000553605 DCPSQ96C86 337 aaKnown RBP18.47■□□□□ 0.55
PRPF39-204ENST00000553605 ZBTB12Q9Y330 459 aaPredicted RBP18.47■□□□□ 0.55
PRPF39-204ENST00000553605 ABCC4O15439 1325 aa18.47■□□□□ 0.55
PRPF39-204ENST00000553605 ADM5C9JUS6 153 aa18.46■□□□□ 0.55
PRPF39-204ENST00000553605 TBC1D10BQ4KMP7 808 aaPredicted RBP18.46■□□□□ 0.55
PRPF39-204ENST00000553605 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
PRPF39-204ENST00000553605 ZBTB3Q9H5J0 574 aa18.46■□□□□ 0.55
PRPF39-204ENST00000553605 HDAC9Q9UKV0 1011 aa18.46■□□□□ 0.55
PRPF39-204ENST00000553605 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
PRPF39-204ENST00000553605 RSPH6AQ9H0K4 717 aa18.45■□□□□ 0.54
PRPF39-204ENST00000553605 EGFRP00533 1210 aa18.44■□□□□ 0.54
PRPF39-204ENST00000553605 DCTN1Q14203 1278 aa18.44■□□□□ 0.54
PRPF39-204ENST00000553605 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
PRPF39-204ENST00000553605 SLC10A5Q5PT55 438 aa18.44■□□□□ 0.54
PRPF39-204ENST00000553605 RBM26Q5T8P6 1007 aaKnown RBP18.44■□□□□ 0.54
PRPF39-204ENST00000553605 PER1O15534 1290 aaPredicted RBP18.43■□□□□ 0.54
PRPF39-204ENST00000553605 MYL6BP14649 208 aa18.43■□□□□ 0.54
PRPF39-204ENST00000553605 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
PRPF39-204ENST00000553605 PSMD14O00487 310 aa18.42■□□□□ 0.54
PRPF39-204ENST00000553605 PARP10Q53GL7 1025 aa18.42■□□□□ 0.54
PRPF39-204ENST00000553605 GIGYF2Q6Y7W6 1299 aaKnown RBP18.42■□□□□ 0.54
PRPF39-204ENST00000553605 ZNF296Q8WUU4 475 aaPredicted RBP18.42■□□□□ 0.54
PRPF39-204ENST00000553605 POLR2AP24928 1970 aaKnown RBP18.42■□□□□ 0.54
PRPF39-204ENST00000553605 RASAL3Q86YV0 1011 aa18.41■□□□□ 0.54
PRPF39-204ENST00000553605 SULF1Q8IWU6 871 aa18.41■□□□□ 0.54
PRPF39-204ENST00000553605 UTP14AQ9BVJ6 771 aaKnown RBP18.41■□□□□ 0.54
PRPF39-204ENST00000553605 HTATSF1O43719 755 aaKnown RBP18.4■□□□□ 0.54
PRPF39-204ENST00000553605 TBC1D8O95759 1140 aa18.4■□□□□ 0.54
PRPF39-204ENST00000553605 RPS12P25398 132 aaKnown RBP18.39■□□□□ 0.53
PRPF39-204ENST00000553605 CNGB1Q14028 1251 aaPredicted RBP18.39■□□□□ 0.53
PRPF39-204ENST00000553605 FBXO46Q6PJ61 603 aaPredicted RBP18.39■□□□□ 0.53
PRPF39-204ENST00000553605 LAMB4A4D0S4 1761 aa18.39■□□□□ 0.53
PRPF39-204ENST00000553605 WASHC4Q2M389 1173 aa18.38■□□□□ 0.53
PRPF39-204ENST00000553605 DDX46Q7L014 1031 aaKnown RBP18.38■□□□□ 0.53
PRPF39-204ENST00000553605 CDCA5Q96FF9 252 aa18.38■□□□□ 0.53
PRPF39-204ENST00000553605 DBNDD1Q9H9R9 158 aa18.38■□□□□ 0.53
PRPF39-204ENST00000553605 GRAPQ13588 217 aa18.37■□□□□ 0.53
PRPF39-204ENST00000553605 KIF4BQ2VIQ3 1234 aa18.37■□□□□ 0.53
PRPF39-204ENST00000553605 GRAPLQ8TC17 118 aaPredicted RBP18.37■□□□□ 0.53
PRPF39-204ENST00000553605 GGA3Q9NZ52 723 aa18.37■□□□□ 0.53
PRPF39-204ENST00000553605 GPR25O00155 361 aa18.36■□□□□ 0.53
PRPF39-204ENST00000553605 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
PRPF39-204ENST00000553605 ASTN2O75129 1339 aaPredicted RBP18.35■□□□□ 0.53
PRPF39-204ENST00000553605 RIMBP2O15034 1052 aa18.35■□□□□ 0.53
PRPF39-204ENST00000553605 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
PRPF39-204ENST00000553605 FKBP1BP68106 108 aa18.35■□□□□ 0.53
PRPF39-204ENST00000553605 NOM1Q5C9Z4 860 aaKnown RBP18.35■□□□□ 0.53
PRPF39-204ENST00000553605 TMC4Q7Z404 712 aa18.35■□□□□ 0.53
PRPF39-204ENST00000553605 PNISRQ8TF01 805 aaKnown RBP18.35■□□□□ 0.53
PRPF39-204ENST00000553605 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
PRPF39-204ENST00000553605 KCNQ5Q9NR82 932 aa18.35■□□□□ 0.53
PRPF39-204ENST00000553605 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
PRPF39-204ENST00000553605 MKI67P46013 3256 aaKnown RBP18.34■□□□□ 0.53
PRPF39-204ENST00000553605 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
PRPF39-204ENST00000553605 FXR1P51114 621 aaKnown RBP eCLIP18.34■□□□□ 0.53
PRPF39-204ENST00000553605 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.53
PRPF39-204ENST00000553605 NSFL1CQ9UNZ2 370 aaKnown RBP18.34■□□□□ 0.53
PRPF39-204ENST00000553605 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
PRPF39-204ENST00000553605 RTL9Q8NET4 1388 aa18.32■□□□□ 0.52
PRPF39-204ENST00000553605 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
PRPF39-204ENST00000553605 ECE2O60344 883 aa18.32■□□□□ 0.52
PRPF39-204ENST00000553605 TM4SF4P48230 202 aa18.32■□□□□ 0.52
PRPF39-204ENST00000553605 DOK7Q18PE1 504 aa18.32■□□□□ 0.52
PRPF39-204ENST00000553605 ANKRD36CQ5JPF3 1778 aa18.32■□□□□ 0.52
PRPF39-204ENST00000553605 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
PRPF39-204ENST00000553605 FKTNO75072 461 aa18.31■□□□□ 0.52
PRPF39-204ENST00000553605 SCARF1Q14162 830 aa18.31■□□□□ 0.52
PRPF39-204ENST00000553605 ANGEL2Q5VTE6 544 aaKnown RBP18.31■□□□□ 0.52
PRPF39-204ENST00000553605 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
PRPF39-204ENST00000553605 POLLQ9UGP5 575 aa18.31■□□□□ 0.52
PRPF39-204ENST00000553605 LAMB2P55268 1798 aa18.3■□□□□ 0.52
PRPF39-204ENST00000553605 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
PRPF39-204ENST00000553605 MOB2Q70IA6 237 aa18.3■□□□□ 0.52
PRPF39-204ENST00000553605 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
PRPF39-204ENST00000553605 TRMT112Q9UI30 125 aaKnown RBP18.3■□□□□ 0.52
PRPF39-204ENST00000553605 POTEFA5A3E0 1075 aa18.29■□□□□ 0.52
PRPF39-204ENST00000553605 UBE2Q2LH0YL09 131 aa18.29■□□□□ 0.52
PRPF39-204ENST00000553605 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
PRPF39-204ENST00000553605 LRP10Q7Z4F1 713 aa18.29■□□□□ 0.52
PRPF39-204ENST00000553605 EYA3Q99504 573 aa18.29■□□□□ 0.52
PRPF39-204ENST00000553605 PAPPA2Q9BXP8 1791 aa18.29■□□□□ 0.52
PRPF39-204ENST00000553605 TAF1P21675 1872 aa18.29■□□□□ 0.52
PRPF39-204ENST00000553605 SH3TC1Q8TE82 1336 aa18.28■□□□□ 0.52
PRPF39-204ENST00000553605 GPSM2P81274 684 aa18.28■□□□□ 0.52
PRPF39-204ENST00000553605 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
PRPF39-204ENST00000553605 ZNF280AP59817 542 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms