RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
MTHFD1-203ENST00000553391 RIPOR2Q9Y4F9 1068 aa11.36□□□□□ -0.59
MTHFD1-203ENST00000553391 SNX14Q9Y5W7 946 aa11.36□□□□□ -0.59
MTHFD1-203ENST00000553391 RAD50Q92878 1312 aa11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 NWD2Q9ULI1 1742 aa11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 IRS4O14654 1257 aaPredicted RBP11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 PDE8AO60658 829 aa11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 CAMTA2O94983 1202 aa11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 NEK4P51957 841 aa11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 NMIQ13287 307 aaPredicted RBP11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 NECTIN1Q15223 517 aa11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 SUSD4Q5VX71 490 aa11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 RASEFQ8IZ41 740 aa11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 CWC22Q9HCG8 908 aaKnown RBP11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 TRMT112Q9UI30 125 aaKnown RBP11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 USP21Q9UK80 565 aa11.35□□□□□ -0.59
MTHFD1-203ENST00000553391 MCM4P33991 863 aa11.34□□□□□ -0.59
MTHFD1-203ENST00000553391 IFIT5Q13325 482 aaKnown RBP11.34□□□□□ -0.59
MTHFD1-203ENST00000553391 CUL4AQ13619 759 aa11.34□□□□□ -0.59
MTHFD1-203ENST00000553391 RAB3GAP1Q15042 981 aa11.34□□□□□ -0.59
MTHFD1-203ENST00000553391 FAM227BQ96M60 508 aa11.34□□□□□ -0.59
MTHFD1-203ENST00000553391 NEUROD6Q96NK8 337 aa11.34□□□□□ -0.59
MTHFD1-203ENST00000553391 AKAP2Q9Y2D5 859 aa11.34□□□□□ -0.59
MTHFD1-203ENST00000553391 PALLDQ8WX93 1383 aa11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 A0A1B0GUL7 405 aa11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 ANKRD18BA2A2Z9 1011 aa11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 RGL2O15211 777 aa11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 PARP10Q53GL7 1025 aa11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 RC3H1Q5TC82 1133 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 EDC3Q96F86 508 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 FSD1Q9BTV5 496 aa11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 UTP14AQ9BVJ6 771 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 TM6SF1Q9BZW5 370 aa11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 UBN2Q6ZU65 1347 aa11.33□□□□□ -0.6
MTHFD1-203ENST00000553391 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 TAF5LO75529 589 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 ITGA6P23229 1130 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 CTSWP56202 376 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 TSGA10IPQ3SY00 556 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 CLEC4GQ6UXB4 293 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 CLEC17AQ6ZS10 378 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 KBTBD3Q8NAB2 608 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 TMX3Q96JJ7 454 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 GJD4Q96KN9 370 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 TTC14Q96N46 770 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 GREM2Q9H772 168 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 CCDC171Q6TFL3 1326 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 TJP1Q07157 1748 aa11.32□□□□□ -0.6
MTHFD1-203ENST00000553391 RFX7Q2KHR2 1363 aa11.31□□□□□ -0.6
MTHFD1-203ENST00000553391 A0A0D9SFI3 127 aa11.31□□□□□ -0.6
MTHFD1-203ENST00000553391 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
MTHFD1-203ENST00000553391 PTF1AQ7RTS3 328 aa11.31□□□□□ -0.6
MTHFD1-203ENST00000553391 LINC00116Q8NCU8 138 aa11.31□□□□□ -0.6
MTHFD1-203ENST00000553391 TNPO1Q92973 898 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-203ENST00000553391 XAGE2Q96GT9 111 aa11.31□□□□□ -0.6
MTHFD1-203ENST00000553391 INTS4Q96HW7 963 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-203ENST00000553391 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
MTHFD1-203ENST00000553391 A0A0G2JS52 829 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 RPS6KA4O75676 772 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 HSP90AA1P07900 732 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 HSPA1LP34931 641 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 NUCB2P80303 420 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 MCMDC2Q4G0Z9 681 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 TAF7LQ5H9L4 462 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 CREB3L3Q68CJ9 461 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 PRPF40BQ6NWY9 871 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 LDHAL6AQ6ZMR3 332 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 ZNF512BQ96KM6 892 aaPredicted RBP11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 CCDC85AQ96PX6 553 aaPredicted RBP11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 ALDH8A1Q9H2A2 487 aaPredicted RBP11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 HELLSQ9NRZ9 838 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 RBM8AQ9Y5S9 174 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 SH3TC1Q8TE82 1336 aa11.3□□□□□ -0.6
MTHFD1-203ENST00000553391 MED23Q9ULK4 1368 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 SLC27A2O14975 620 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 NTSR2O95665 410 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 HSP90B1P14625 803 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 SSFA2P28290 1259 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 ADORA1P30542 326 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 DEKP35659 375 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 CCDC158Q5M9N0 1113 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 SLC10A5Q5PT55 438 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 ZMYM1Q5SVZ6 1142 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 VGLL2Q8N8G2 317 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 DNAJC2Q99543 621 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 PAG1Q9NWQ8 432 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 KAT6BQ8WYB5 2073 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
MTHFD1-203ENST00000553391 RNF113AO15541 343 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-203ENST00000553391 PDE8BO95263 885 aa11.28□□□□□ -0.6
MTHFD1-203ENST00000553391 HCLS1P14317 486 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-203ENST00000553391 FGFR2P21802 821 aa11.28□□□□□ -0.6
MTHFD1-203ENST00000553391 METTL24Q5JXM2 366 aa11.28□□□□□ -0.6
MTHFD1-203ENST00000553391 ZNF589Q86UQ0 364 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms