RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 FRRS1LQ9P0K9 344 aa7.54□□□□□ -1.2
HCFC2-206ENST00000552343 DEAF1O75398 565 aaPredicted RBP7.53□□□□□ -1.2
HCFC2-206ENST00000552343 PLEKHM2Q8IWE5 1019 aa7.53□□□□□ -1.2
HCFC2-206ENST00000552343 DZIP1LQ8IYY4 767 aaKnown RBP7.53□□□□□ -1.2
HCFC2-206ENST00000552343 PBXIP1Q96AQ6 731 aa7.53□□□□□ -1.2
HCFC2-206ENST00000552343 C2orf49Q9BVC5 232 aaPredicted RBP7.53□□□□□ -1.2
HCFC2-206ENST00000552343 ATAD2Q6PL18 1390 aa7.53□□□□□ -1.2
HCFC2-206ENST00000552343 USP17L3A6NCW0 530 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 USP17L4A6NCW7 530 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 GRNP28799 593 aaKnown RBP7.52□□□□□ -1.21
HCFC2-206ENST00000552343 PCSK7Q16549 785 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 IER5Q5VY09 327 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 USP17L2Q6R6M4 530 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 USP17L1Q7RTZ2 530 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 SLC51AQ86UW1 340 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 STAG2Q8N3U4 1231 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 LARGE2Q8N3Y3 721 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 OGFOD1Q8N543 542 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 KRTAP4-9Q9BYQ8 210 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 PPP1R12CQ9BZL4 782 aa7.52□□□□□ -1.21
HCFC2-206ENST00000552343 MAP3K6O95382 1288 aa7.51□□□□□ -1.21
HCFC2-206ENST00000552343 CD97P48960 835 aa7.51□□□□□ -1.21
HCFC2-206ENST00000552343 IRAK1P51617 712 aa7.51□□□□□ -1.21
HCFC2-206ENST00000552343 ELMSAN1Q6PJG2 1045 aa7.51□□□□□ -1.21
HCFC2-206ENST00000552343 TTC9Q92623 222 aa7.51□□□□□ -1.21
HCFC2-206ENST00000552343 AKTIPQ9H8T0 292 aa7.51□□□□□ -1.21
HCFC2-206ENST00000552343 ZFATQ9P243 1243 aa7.51□□□□□ -1.21
HCFC2-206ENST00000552343 DMGDHQ9UI17 866 aaKnown RBP7.51□□□□□ -1.21
HCFC2-206ENST00000552343 PALM3A6NDB9 673 aaPredicted RBP7.5□□□□□ -1.21
HCFC2-206ENST00000552343 TGFBR3LH3BV60 316 aa7.5□□□□□ -1.21
HCFC2-206ENST00000552343 DLL1O00548 723 aa7.5□□□□□ -1.21
HCFC2-206ENST00000552343 ALX3O95076 343 aa7.5□□□□□ -1.21
HCFC2-206ENST00000552343 YBX3P16989 372 aaKnown RBP eCLIP7.5□□□□□ -1.21
HCFC2-206ENST00000552343 MLLT1Q03111 559 aaPredicted RBP7.5□□□□□ -1.21
HCFC2-206ENST00000552343 DHX32Q7L7V1 743 aaKnown RBP7.5□□□□□ -1.21
HCFC2-206ENST00000552343 TRPM4Q8TD43 1214 aa7.5□□□□□ -1.21
HCFC2-206ENST00000552343 CHMP7Q8WUX9 453 aaPredicted RBP7.5□□□□□ -1.21
HCFC2-206ENST00000552343 SCG3Q8WXD2 468 aaKnown RBP7.5□□□□□ -1.21
HCFC2-206ENST00000552343 BCS1LQ9Y276 419 aa7.5□□□□□ -1.21
HCFC2-206ENST00000552343 ZBTB7CA1YPR0 619 aa7.49□□□□□ -1.21
HCFC2-206ENST00000552343 PATL2C9JE40 543 aaKnown RBP7.49□□□□□ -1.21
HCFC2-206ENST00000552343 DKK1O94907 266 aa7.49□□□□□ -1.21
HCFC2-206ENST00000552343 KRT25Q7Z3Z0 450 aa7.49□□□□□ -1.21
HCFC2-206ENST00000552343 SIX5Q8N196 739 aa7.49□□□□□ -1.21
HCFC2-206ENST00000552343 ATP9BO43861 1147 aa7.48□□□□□ -1.21
HCFC2-206ENST00000552343 MED26O95402 600 aa7.48□□□□□ -1.21
HCFC2-206ENST00000552343 TARSP26639 723 aaKnown RBP7.48□□□□□ -1.21
HCFC2-206ENST00000552343 LMOD1P29536 600 aaPredicted RBP7.48□□□□□ -1.21
HCFC2-206ENST00000552343 RTN1Q16799 776 aa7.48□□□□□ -1.21
HCFC2-206ENST00000552343 GAS2L2Q8NHY3 880 aa7.48□□□□□ -1.21
HCFC2-206ENST00000552343 ADAMTS19Q8TE59 1207 aa7.48□□□□□ -1.21
HCFC2-206ENST00000552343 IFT43Q96FT9 208 aa7.48□□□□□ -1.21
HCFC2-206ENST00000552343 ZNF594Q96JF6 807 aaPredicted RBP7.48□□□□□ -1.21
HCFC2-206ENST00000552343 SMG9Q9H0W8 520 aaKnown RBP7.48□□□□□ -1.21
HCFC2-206ENST00000552343 MKRN1Q9UHC7 482 aaKnown RBP7.48□□□□□ -1.21
HCFC2-206ENST00000552343 ARID1BQ8NFD5 2236 aaPredicted RBP7.48□□□□□ -1.21
HCFC2-206ENST00000552343 F8W735 103 aaPredicted RBP7.47□□□□□ -1.21
HCFC2-206ENST00000552343 EPB42P16452 691 aa7.47□□□□□ -1.21
HCFC2-206ENST00000552343 RFX1P22670 979 aa7.47□□□□□ -1.21
HCFC2-206ENST00000552343 GPLD1P80108 840 aa7.47□□□□□ -1.21
HCFC2-206ENST00000552343 TMEM130Q8N3G9 435 aa7.47□□□□□ -1.21
HCFC2-206ENST00000552343 TFIP11Q9UBB9 837 aaKnown RBP7.47□□□□□ -1.21
HCFC2-206ENST00000552343 OAS3Q9Y6K5 1087 aaKnown RBP7.47□□□□□ -1.21
HCFC2-206ENST00000552343 TAL1P17542 331 aaPredicted RBP7.46□□□□□ -1.22
HCFC2-206ENST00000552343 INPP5BP32019 993 aa7.46□□□□□ -1.22
HCFC2-206ENST00000552343 IDH3AP50213 366 aa7.46□□□□□ -1.22
HCFC2-206ENST00000552343 HFE2Q6ZVN8 426 aa7.46□□□□□ -1.22
HCFC2-206ENST00000552343 TRAIPQ9BWF2 469 aa7.46□□□□□ -1.22
HCFC2-206ENST00000552343 KRTAP4-2Q9BYR5 136 aa7.46□□□□□ -1.22
HCFC2-206ENST00000552343 MRPL18Q9H0U6 180 aaKnown RBP7.46□□□□□ -1.22
HCFC2-206ENST00000552343 USTQ9Y2C2 406 aa7.46□□□□□ -1.22
HCFC2-206ENST00000552343 RBM19Q9Y4C8 960 aaKnown RBP7.46□□□□□ -1.22
HCFC2-206ENST00000552343 SASH3O75995 380 aa7.45□□□□□ -1.22
HCFC2-206ENST00000552343 CFAP70Q5T0N1 1121 aa7.45□□□□□ -1.22
HCFC2-206ENST00000552343 UCN2Q96RP3 112 aa7.45□□□□□ -1.22
HCFC2-206ENST00000552343 VRTNQ9H8Y1 702 aa7.45□□□□□ -1.22
HCFC2-206ENST00000552343 MAFBQ9Y5Q3 323 aaPredicted RBP7.45□□□□□ -1.22
HCFC2-206ENST00000552343 KIAA1324LA8MWY0 1029 aaPredicted RBP7.44□□□□□ -1.22
HCFC2-206ENST00000552343 PTCD1O75127 700 aaKnown RBP7.44□□□□□ -1.22
HCFC2-206ENST00000552343 RARAP10276 462 aa7.44□□□□□ -1.22
HCFC2-206ENST00000552343 GP2P55259 537 aaKnown RBP7.44□□□□□ -1.22
HCFC2-206ENST00000552343 TGFB1P01137 390 aa7.43□□□□□ -1.22
HCFC2-206ENST00000552343 IGLV1-40P01703 118 aa7.43□□□□□ -1.22
HCFC2-206ENST00000552343 EIF2AK2P19525 551 aaKnown RBP7.43□□□□□ -1.22
HCFC2-206ENST00000552343 B4GALNT3Q6L9W6 998 aa7.43□□□□□ -1.22
HCFC2-206ENST00000552343 Q6ZS46 218 aa7.43□□□□□ -1.22
HCFC2-206ENST00000552343 RETREG2Q8NC44 543 aa7.43□□□□□ -1.22
HCFC2-206ENST00000552343 KLK14Q9P0G3 267 aa7.43□□□□□ -1.22
HCFC2-206ENST00000552343 RAXQ9Y2V3 346 aa7.43□□□□□ -1.22
HCFC2-206ENST00000552343 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.42□□□□□ -1.22
HCFC2-206ENST00000552343 GSC2O15499 205 aa7.42□□□□□ -1.22
HCFC2-206ENST00000552343 ATG7O95352 703 aa7.42□□□□□ -1.22
HCFC2-206ENST00000552343 RASA1P20936 1047 aa7.42□□□□□ -1.22
HCFC2-206ENST00000552343 ARSDP51689 593 aa7.42□□□□□ -1.22
HCFC2-206ENST00000552343 NRLP54845 237 aa7.42□□□□□ -1.22
HCFC2-206ENST00000552343 SEC13P55735 322 aa7.42□□□□□ -1.22
HCFC2-206ENST00000552343 AGGF1Q8N302 714 aaeCLIP7.42□□□□□ -1.22
HCFC2-206ENST00000552343 C11orf16Q9NQ32 467 aa7.42□□□□□ -1.22
HCFC2-206ENST00000552343 RNF114Q9Y508 228 aa7.42□□□□□ -1.22
HCFC2-206ENST00000552343 J3QW42 95 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms