RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 KRT26Q7Z3Y9 468 aa15.95■□□□□ 0.14
PTCH1-222ENST00000551425 SP8Q8IXZ3 490 aa15.95■□□□□ 0.14
PTCH1-222ENST00000551425 MICALL2Q8IY33 904 aa15.95■□□□□ 0.14
PTCH1-222ENST00000551425 NGEFQ8N5V2 710 aa15.95■□□□□ 0.14
PTCH1-222ENST00000551425 DPF2Q92785 391 aa15.95■□□□□ 0.14
PTCH1-222ENST00000551425 CSRNP1Q96S65 589 aa15.95■□□□□ 0.14
PTCH1-222ENST00000551425 ABCC4O15439 1325 aa15.94■□□□□ 0.14
PTCH1-222ENST00000551425 BBOX1O75936 387 aa15.94■□□□□ 0.14
PTCH1-222ENST00000551425 SLC10A3P09131 477 aa15.94■□□□□ 0.14
PTCH1-222ENST00000551425 PKN2Q16513 984 aaKnown RBP15.94■□□□□ 0.14
PTCH1-222ENST00000551425 SLC10A5Q5PT55 438 aa15.94■□□□□ 0.14
PTCH1-222ENST00000551425 PPP1R42Q7Z4L9 355 aa15.94■□□□□ 0.14
PTCH1-222ENST00000551425 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
PTCH1-222ENST00000551425 MPNDQ8N594 471 aa15.94■□□□□ 0.14
PTCH1-222ENST00000551425 NUP98P52948 1817 aa15.94■□□□□ 0.14
PTCH1-222ENST00000551425 YDJCA8MPS7 323 aa15.93■□□□□ 0.14
PTCH1-222ENST00000551425 HTATSF1O43719 755 aaKnown RBP15.93■□□□□ 0.14
PTCH1-222ENST00000551425 TAF7Q15545 349 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-222ENST00000551425 PARP10Q53GL7 1025 aa15.93■□□□□ 0.14
PTCH1-222ENST00000551425 ZBTB3Q9H5J0 574 aa15.93■□□□□ 0.14
PTCH1-222ENST00000551425 LAMB4A4D0S4 1761 aa15.92■□□□□ 0.14
PTCH1-222ENST00000551425 DCTN1Q14203 1278 aa15.92■□□□□ 0.14
PTCH1-222ENST00000551425 GIGYF2Q6Y7W6 1299 aaKnown RBP15.92■□□□□ 0.14
PTCH1-222ENST00000551425 SAMD7Q7Z3H4 446 aa15.92■□□□□ 0.14
PTCH1-222ENST00000551425 CLSPNQ9HAW4 1339 aa15.92■□□□□ 0.14
PTCH1-222ENST00000551425 DCPSQ96C86 337 aaKnown RBP15.91■□□□□ 0.14
PTCH1-222ENST00000551425 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-222ENST00000551425 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
PTCH1-222ENST00000551425 ADM5C9JUS6 153 aa15.9■□□□□ 0.14
PTCH1-222ENST00000551425 EGFRP00533 1210 aa15.9■□□□□ 0.14
PTCH1-222ENST00000551425 TBC1D10BQ4KMP7 808 aaPredicted RBP15.9■□□□□ 0.14
PTCH1-222ENST00000551425 MYL6BP14649 208 aa15.89■□□□□ 0.13
PTCH1-222ENST00000551425 RPS12P25398 132 aaKnown RBP15.89■□□□□ 0.13
PTCH1-222ENST00000551425 UTP14AQ9BVJ6 771 aaKnown RBP15.89■□□□□ 0.13
PTCH1-222ENST00000551425 MIS18AQ9NYP9 233 aa15.89■□□□□ 0.13
PTCH1-222ENST00000551425 PSMD14O00487 310 aa15.88■□□□□ 0.13
PTCH1-222ENST00000551425 HABP4Q5JVS0 413 aaKnown RBP15.88■□□□□ 0.13
PTCH1-222ENST00000551425 PNISRQ8TF01 805 aaKnown RBP15.88■□□□□ 0.13
PTCH1-222ENST00000551425 AKAP11Q9UKA4 1901 aa15.88■□□□□ 0.13
PTCH1-222ENST00000551425 DUOX1Q9NRD9 1551 aa15.87■□□□□ 0.13
PTCH1-222ENST00000551425 GRAPQ13588 217 aa15.87■□□□□ 0.13
PTCH1-222ENST00000551425 TMC4Q7Z404 712 aa15.87■□□□□ 0.13
PTCH1-222ENST00000551425 RASAL3Q86YV0 1011 aa15.87■□□□□ 0.13
PTCH1-222ENST00000551425 GRAPLQ8TC17 118 aaPredicted RBP15.87■□□□□ 0.13
PTCH1-222ENST00000551425 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
PTCH1-222ENST00000551425 HDAC9Q9UKV0 1011 aa15.87■□□□□ 0.13
PTCH1-222ENST00000551425 NUDCQ9Y266 331 aa15.87■□□□□ 0.13
PTCH1-222ENST00000551425 ERBB4Q15303 1308 aa15.87■□□□□ 0.13
PTCH1-222ENST00000551425 EIF4A1P60842 406 aaKnown RBP15.86■□□□□ 0.13
PTCH1-222ENST00000551425 NOM1Q5C9Z4 860 aaKnown RBP15.86■□□□□ 0.13
PTCH1-222ENST00000551425 DDX46Q7L014 1031 aaKnown RBP15.86■□□□□ 0.13
PTCH1-222ENST00000551425 SULF1Q8IWU6 871 aa15.86■□□□□ 0.13
PTCH1-222ENST00000551425 ZNF296Q8WUU4 475 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-222ENST00000551425 U2AF1L5P0DN76 240 aaPredicted RBP15.85■□□□□ 0.13
PTCH1-222ENST00000551425 FKBP1BP68106 108 aa15.85■□□□□ 0.13
PTCH1-222ENST00000551425 U2AF1Q01081 240 aaKnown RBP eCLIP15.85■□□□□ 0.13
PTCH1-222ENST00000551425 WASHC4Q2M389 1173 aa15.85■□□□□ 0.13
PTCH1-222ENST00000551425 RBM26Q5T8P6 1007 aaKnown RBP15.85■□□□□ 0.13
PTCH1-222ENST00000551425 FBXO46Q6PJ61 603 aaPredicted RBP15.85■□□□□ 0.13
PTCH1-222ENST00000551425 CDCA5Q96FF9 252 aa15.85■□□□□ 0.13
PTCH1-222ENST00000551425 GGA3Q9NZ52 723 aa15.85■□□□□ 0.13
PTCH1-222ENST00000551425 KIF4BQ2VIQ3 1234 aa15.84■□□□□ 0.13
PTCH1-222ENST00000551425 LRP10Q7Z4F1 713 aa15.84■□□□□ 0.13
PTCH1-222ENST00000551425 DBNDD1Q9H9R9 158 aa15.84■□□□□ 0.13
PTCH1-222ENST00000551425 HCLS1P14317 486 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-222ENST00000551425 RTL9Q8NET4 1388 aa15.83■□□□□ 0.12
PTCH1-222ENST00000551425 ANKRD36CQ5JPF3 1778 aa15.82■□□□□ 0.12
PTCH1-222ENST00000551425 TBC1D8O95759 1140 aa15.82■□□□□ 0.12
PTCH1-222ENST00000551425 LRRC37AA6NMS7 1700 aa15.82■□□□□ 0.12
PTCH1-222ENST00000551425 KDM3BQ7LBC6 1761 aa15.82■□□□□ 0.12
PTCH1-222ENST00000551425 GPR25O00155 361 aa15.81■□□□□ 0.12
PTCH1-222ENST00000551425 ECE2O60344 883 aa15.81■□□□□ 0.12
PTCH1-222ENST00000551425 ASTN2O75129 1339 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-222ENST00000551425 VIL1P09327 827 aaKnown RBP15.81■□□□□ 0.12
PTCH1-222ENST00000551425 NLRP10Q86W26 655 aa15.81■□□□□ 0.12
PTCH1-222ENST00000551425 KCNQ5Q9NR82 932 aa15.81■□□□□ 0.12
PTCH1-222ENST00000551425 POLR2AP24928 1970 aaKnown RBP15.8■□□□□ 0.12
PTCH1-222ENST00000551425 LAMB2P55268 1798 aa15.8■□□□□ 0.12
PTCH1-222ENST00000551425 SH3TC1Q8TE82 1336 aa15.8■□□□□ 0.12
PTCH1-222ENST00000551425 TM4SF4P48230 202 aa15.8■□□□□ 0.12
PTCH1-222ENST00000551425 CNGB1Q14028 1251 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-222ENST00000551425 PDIA6Q15084 440 aa15.8■□□□□ 0.12
PTCH1-222ENST00000551425 HSP90AB3PQ58FF7 597 aa15.8■□□□□ 0.12
PTCH1-222ENST00000551425 POLLQ9UGP5 575 aa15.8■□□□□ 0.12
PTCH1-222ENST00000551425 NSFL1CQ9UNZ2 370 aaKnown RBP15.8■□□□□ 0.12
PTCH1-222ENST00000551425 PAPPA2Q9BXP8 1791 aa15.8■□□□□ 0.12
PTCH1-222ENST00000551425 RIMBP2O15034 1052 aa15.79■□□□□ 0.12
PTCH1-222ENST00000551425 ZNF280AP59817 542 aaPredicted RBP15.79■□□□□ 0.12
PTCH1-222ENST00000551425 EYA3Q99504 573 aa15.79■□□□□ 0.12
PTCH1-222ENST00000551425 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
PTCH1-222ENST00000551425 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
PTCH1-222ENST00000551425 TRMT112Q9UI30 125 aaKnown RBP15.79■□□□□ 0.12
PTCH1-222ENST00000551425 ZNF609O15014 1411 aa15.78■□□□□ 0.12
PTCH1-222ENST00000551425 C6orf229H3BNL8 230 aa15.78■□□□□ 0.12
PTCH1-222ENST00000551425 FXR1P51114 621 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTCH1-222ENST00000551425 DOK7Q18PE1 504 aa15.78■□□□□ 0.12
PTCH1-222ENST00000551425 ANGEL2Q5VTE6 544 aaKnown RBP15.78■□□□□ 0.12
PTCH1-222ENST00000551425 PITPNM2Q9BZ72 1349 aa15.77■□□□□ 0.12
PTCH1-222ENST00000551425 FKTNO75072 461 aa15.77■□□□□ 0.12
PTCH1-222ENST00000551425 GPSM2P81274 684 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms