RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 ADM5C9JUS6 153 aa13.64□□□□□ -0.23
BEST3-210ENST00000551160 EGFRP00533 1210 aa13.64□□□□□ -0.23
BEST3-210ENST00000551160 MYL6BP14649 208 aa13.64□□□□□ -0.23
BEST3-210ENST00000551160 TNIP1Q15025 636 aa13.64□□□□□ -0.23
BEST3-210ENST00000551160 SAMD7Q7Z3H4 446 aa13.64□□□□□ -0.23
BEST3-210ENST00000551160 KRT26Q7Z3Y9 468 aa13.64□□□□□ -0.23
BEST3-210ENST00000551160 CTU1Q7Z7A3 348 aaKnown RBP13.64□□□□□ -0.23
BEST3-210ENST00000551160 ZBTB12Q9Y330 459 aaPredicted RBP13.64□□□□□ -0.23
BEST3-210ENST00000551160 H7C1D1 291 aa13.63□□□□□ -0.23
BEST3-210ENST00000551160 ZNF157P51786 506 aaPredicted RBP13.63□□□□□ -0.23
BEST3-210ENST00000551160 TAF7Q15545 349 aaPredicted RBP13.63□□□□□ -0.23
BEST3-210ENST00000551160 TBC1D10BQ4KMP7 808 aaPredicted RBP13.63□□□□□ -0.23
BEST3-210ENST00000551160 MPNDQ8N594 471 aa13.63□□□□□ -0.23
BEST3-210ENST00000551160 NLRP3Q96P20 1036 aa13.63□□□□□ -0.23
BEST3-210ENST00000551160 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
BEST3-210ENST00000551160 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
BEST3-210ENST00000551160 CCDC102AQ96A19 550 aa13.62□□□□□ -0.23
BEST3-210ENST00000551160 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
BEST3-210ENST00000551160 PSMD14O00487 310 aa13.61□□□□□ -0.23
BEST3-210ENST00000551160 SLC10A3P09131 477 aa13.61□□□□□ -0.23
BEST3-210ENST00000551160 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
BEST3-210ENST00000551160 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
BEST3-210ENST00000551160 SP8Q8IXZ3 490 aa13.61□□□□□ -0.23
BEST3-210ENST00000551160 C2orf69Q8N8R5 385 aa13.61□□□□□ -0.23
BEST3-210ENST00000551160 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
BEST3-210ENST00000551160 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
BEST3-210ENST00000551160 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
BEST3-210ENST00000551160 HTATSF1O43719 755 aaKnown RBP13.6□□□□□ -0.23
BEST3-210ENST00000551160 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
BEST3-210ENST00000551160 EIF4A1P60842 406 aaKnown RBP13.6□□□□□ -0.23
BEST3-210ENST00000551160 PARP10Q53GL7 1025 aa13.6□□□□□ -0.23
BEST3-210ENST00000551160 SLC10A5Q5PT55 438 aa13.6□□□□□ -0.23
BEST3-210ENST00000551160 CFAP53Q96M91 514 aa13.6□□□□□ -0.23
BEST3-210ENST00000551160 DUOX1Q9NRD9 1551 aa13.59□□□□□ -0.23
BEST3-210ENST00000551160 LAMB4A4D0S4 1761 aa13.59□□□□□ -0.23
BEST3-210ENST00000551160 BBOX1O75936 387 aa13.59□□□□□ -0.23
BEST3-210ENST00000551160 RBM26Q5T8P6 1007 aaKnown RBP13.59□□□□□ -0.23
BEST3-210ENST00000551160 PCGF6Q9BYE7 350 aa13.59□□□□□ -0.23
BEST3-210ENST00000551160 ASTN2O75129 1339 aaPredicted RBP13.59□□□□□ -0.23
BEST3-210ENST00000551160 GRAPQ13588 217 aa13.58□□□□□ -0.24
BEST3-210ENST00000551160 RASAL3Q86YV0 1011 aa13.58□□□□□ -0.24
BEST3-210ENST00000551160 GRAPLQ8TC17 118 aaPredicted RBP13.58□□□□□ -0.24
BEST3-210ENST00000551160 DPF2Q92785 391 aa13.58□□□□□ -0.24
BEST3-210ENST00000551160 DCPSQ96C86 337 aaKnown RBP13.58□□□□□ -0.24
BEST3-210ENST00000551160 THUMPD2Q9BTF0 503 aaKnown RBP13.58□□□□□ -0.24
BEST3-210ENST00000551160 DBNDD1Q9H9R9 158 aa13.58□□□□□ -0.24
BEST3-210ENST00000551160 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
BEST3-210ENST00000551160 TRIM26Q12899 539 aaPredicted RBP13.57□□□□□ -0.24
BEST3-210ENST00000551160 LRP10Q7Z4F1 713 aa13.57□□□□□ -0.24
BEST3-210ENST00000551160 KCNQ5Q9NR82 932 aa13.57□□□□□ -0.24
BEST3-210ENST00000551160 GGA3Q9NZ52 723 aa13.57□□□□□ -0.24
BEST3-210ENST00000551160 RTL9Q8NET4 1388 aa13.57□□□□□ -0.24
BEST3-210ENST00000551160 NUP98P52948 1817 aa13.56□□□□□ -0.24
BEST3-210ENST00000551160 PROSER3Q2NL68 480 aa13.56□□□□□ -0.24
BEST3-210ENST00000551160 KIF4BQ2VIQ3 1234 aa13.56□□□□□ -0.24
BEST3-210ENST00000551160 DDX46Q7L014 1031 aaKnown RBP13.56□□□□□ -0.24
BEST3-210ENST00000551160 PNISRQ8TF01 805 aaKnown RBP13.56□□□□□ -0.24
BEST3-210ENST00000551160 CDCA5Q96FF9 252 aa13.56□□□□□ -0.24
BEST3-210ENST00000551160 RIMBP2O15034 1052 aa13.55□□□□□ -0.24
BEST3-210ENST00000551160 ANXA1P04083 346 aa13.55□□□□□ -0.24
BEST3-210ENST00000551160 PDIA6Q15084 440 aa13.55□□□□□ -0.24
BEST3-210ENST00000551160 WASHC4Q2M389 1173 aa13.55□□□□□ -0.24
BEST3-210ENST00000551160 SULF1Q8IWU6 871 aa13.55□□□□□ -0.24
BEST3-210ENST00000551160 ZNF296Q8WUU4 475 aaPredicted RBP13.55□□□□□ -0.24
BEST3-210ENST00000551160 ZNF428Q96B54 188 aa13.55□□□□□ -0.24
BEST3-210ENST00000551160 HDAC9Q9UKV0 1011 aa13.55□□□□□ -0.24
BEST3-210ENST00000551160 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
BEST3-210ENST00000551160 ECE2O60344 883 aa13.54□□□□□ -0.24
BEST3-210ENST00000551160 TBC1D8O95759 1140 aa13.54□□□□□ -0.24
BEST3-210ENST00000551160 RPS12P25398 132 aaKnown RBP13.54□□□□□ -0.24
BEST3-210ENST00000551160 PKN2Q16513 984 aaKnown RBP13.54□□□□□ -0.24
BEST3-210ENST00000551160 DOK7Q18PE1 504 aa13.54□□□□□ -0.24
BEST3-210ENST00000551160 NLRP10Q86W26 655 aa13.54□□□□□ -0.24
BEST3-210ENST00000551160 GPSM2P81274 684 aa13.53□□□□□ -0.24
BEST3-210ENST00000551160 HABP4Q5JVS0 413 aaKnown RBP13.53□□□□□ -0.24
BEST3-210ENST00000551160 MOB2Q70IA6 237 aa13.53□□□□□ -0.24
BEST3-210ENST00000551160 POLLQ9UGP5 575 aa13.53□□□□□ -0.24
BEST3-210ENST00000551160 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
BEST3-210ENST00000551160 C6orf229H3BNL8 230 aa13.52□□□□□ -0.25
BEST3-210ENST00000551160 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
BEST3-210ENST00000551160 PPP2R1AP30153 589 aa13.52□□□□□ -0.25
BEST3-210ENST00000551160 TMC4Q7Z404 712 aa13.52□□□□□ -0.25
BEST3-210ENST00000551160 CELF1Q92879 486 aaKnown RBP13.52□□□□□ -0.25
BEST3-210ENST00000551160 GCC1Q96CN9 775 aa13.52□□□□□ -0.25
BEST3-210ENST00000551160 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.25
BEST3-210ENST00000551160 SH3TC1Q8TE82 1336 aa13.52□□□□□ -0.25
BEST3-210ENST00000551160 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.25
BEST3-210ENST00000551160 ANGEL2Q5VTE6 544 aaKnown RBP13.51□□□□□ -0.25
BEST3-210ENST00000551160 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
BEST3-210ENST00000551160 SCAF8Q9UPN6 1271 aaKnown RBP13.51□□□□□ -0.25
BEST3-210ENST00000551160 VIL1P09327 827 aaKnown RBP13.5□□□□□ -0.25
BEST3-210ENST00000551160 AIMP1Q12904 312 aaKnown RBP13.5□□□□□ -0.25
BEST3-210ENST00000551160 SCARF1Q14162 830 aa13.5□□□□□ -0.25
BEST3-210ENST00000551160 FBXO46Q6PJ61 603 aaPredicted RBP13.5□□□□□ -0.25
BEST3-210ENST00000551160 XAGE3Q8WTP9 111 aa13.5□□□□□ -0.25
BEST3-210ENST00000551160 COL4A1P02462 1669 aa13.5□□□□□ -0.25
BEST3-210ENST00000551160 UBE2Q2LH0YL09 131 aa13.49□□□□□ -0.25
BEST3-210ENST00000551160 GPR25O00155 361 aa13.49□□□□□ -0.25
BEST3-210ENST00000551160 FKBP1BP68106 108 aa13.49□□□□□ -0.25
BEST3-210ENST00000551160 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1167.3 ms