RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 C4BP0C0L5 1744 aa9.32□□□□□ -0.92
KRR1-204ENST00000550898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.32□□□□□ -0.92
KRR1-204ENST00000550898 RC3H1Q5TC82 1133 aaKnown RBP9.32□□□□□ -0.92
KRR1-204ENST00000550898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.32□□□□□ -0.92
KRR1-204ENST00000550898 NLRP7Q8WX94 980 aa9.32□□□□□ -0.92
KRR1-204ENST00000550898 FMNL2Q96PY5 1086 aa9.32□□□□□ -0.92
KRR1-204ENST00000550898 PDZRN3Q9UPQ7 1066 aa9.32□□□□□ -0.92
KRR1-204ENST00000550898 C5P01031 1676 aa9.32□□□□□ -0.92
KRR1-204ENST00000550898 SCN11AQ9UI33 1791 aa9.32□□□□□ -0.92
KRR1-204ENST00000550898 STARD3NLO95772 234 aa9.31□□□□□ -0.92
KRR1-204ENST00000550898 S1PR4O95977 384 aa9.31□□□□□ -0.92
KRR1-204ENST00000550898 POLD1P28340 1107 aa9.31□□□□□ -0.92
KRR1-204ENST00000550898 CRKLP46109 303 aaKnown RBP9.31□□□□□ -0.92
KRR1-204ENST00000550898 TAF7Q15545 349 aaPredicted RBP9.31□□□□□ -0.92
KRR1-204ENST00000550898 COL23A1Q86Y22 540 aaPredicted RBP9.31□□□□□ -0.92
KRR1-204ENST00000550898 DNAJC10Q8IXB1 793 aa9.31□□□□□ -0.92
KRR1-204ENST00000550898 NECTIN2Q92692 538 aa9.31□□□□□ -0.92
KRR1-204ENST00000550898 ZNF496Q96IT1 587 aaPredicted RBP9.31□□□□□ -0.92
KRR1-204ENST00000550898 TMUB1Q9BVT8 246 aa9.31□□□□□ -0.92
KRR1-204ENST00000550898 TEX13AQ9BXU3 409 aaPredicted RBP9.31□□□□□ -0.92
KRR1-204ENST00000550898 HEG1Q9ULI3 1381 aa9.31□□□□□ -0.92
KRR1-204ENST00000550898 ZNF831Q5JPB2 1677 aa9.31□□□□□ -0.92
KRR1-204ENST00000550898 CASZ1Q86V15 1759 aa9.31□□□□□ -0.92
KRR1-204ENST00000550898 RPS6KA4O75676 772 aa9.3□□□□□ -0.92
KRR1-204ENST00000550898 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
KRR1-204ENST00000550898 PLA2G2CQ5R387 149 aa9.3□□□□□ -0.92
KRR1-204ENST00000550898 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
KRR1-204ENST00000550898 THUMPD2Q9BTF0 503 aaKnown RBP9.3□□□□□ -0.92
KRR1-204ENST00000550898 CCDC87Q9NVE4 849 aa9.3□□□□□ -0.92
KRR1-204ENST00000550898 RRP7AQ9Y3A4 280 aaKnown RBP9.3□□□□□ -0.92
KRR1-204ENST00000550898 CYP19A1P11511 503 aaPredicted RBP9.29□□□□□ -0.92
KRR1-204ENST00000550898 RFC4P35249 363 aa9.29□□□□□ -0.92
KRR1-204ENST00000550898 CCDC184Q52MB2 194 aa9.29□□□□□ -0.92
KRR1-204ENST00000550898 LIAT1Q6ZQX7 453 aa9.29□□□□□ -0.92
KRR1-204ENST00000550898 METTL3Q86U44 580 aaKnown RBP9.29□□□□□ -0.92
KRR1-204ENST00000550898 AMIGO3Q86WK7 504 aa9.29□□□□□ -0.92
KRR1-204ENST00000550898 CICQ96RK0 1608 aaPredicted RBP9.29□□□□□ -0.92
KRR1-204ENST00000550898 KCNQ3O43525 872 aa9.28□□□□□ -0.92
KRR1-204ENST00000550898 SNRPA1P09661 255 aaKnown RBP9.28□□□□□ -0.92
KRR1-204ENST00000550898 CALD1Q05682 793 aaKnown RBP9.28□□□□□ -0.92
KRR1-204ENST00000550898 PUS10Q3MIT2 529 aaKnown RBP9.28□□□□□ -0.92
KRR1-204ENST00000550898 MSL1Q68DK7 614 aa9.28□□□□□ -0.92
KRR1-204ENST00000550898 INTS5Q6P9B9 1019 aaKnown RBP9.28□□□□□ -0.92
KRR1-204ENST00000550898 NPM2Q86SE8 214 aaKnown RBP9.28□□□□□ -0.92
KRR1-204ENST00000550898 ARXQ96QS3 562 aa9.28□□□□□ -0.92
KRR1-204ENST00000550898 PHOX2BQ99453 314 aa9.28□□□□□ -0.92
KRR1-204ENST00000550898 PRR14Q9BWN1 585 aa9.28□□□□□ -0.92
KRR1-204ENST00000550898 BABAM1Q9NWV8 329 aa9.28□□□□□ -0.92
KRR1-204ENST00000550898 TSPYL4Q9UJ04 414 aa9.28□□□□□ -0.92
KRR1-204ENST00000550898 KAT6BQ8WYB5 2073 aa9.28□□□□□ -0.92
KRR1-204ENST00000550898 QSER1Q2KHR3 1735 aa9.28□□□□□ -0.92
KRR1-204ENST00000550898 APAF1O14727 1248 aa9.27□□□□□ -0.93
KRR1-204ENST00000550898 GGCXP38435 758 aa9.27□□□□□ -0.93
KRR1-204ENST00000550898 SLC19A1P41440 591 aa9.27□□□□□ -0.93
KRR1-204ENST00000550898 SMIM5Q71RC9 77 aa9.27□□□□□ -0.93
KRR1-204ENST00000550898 ZBTB1Q9Y2K1 713 aa9.27□□□□□ -0.93
KRR1-204ENST00000550898 SRCAPQ6ZRS2 3230 aa9.27□□□□□ -0.93
KRR1-204ENST00000550898 SOS1Q07889 1333 aaPredicted RBP9.27□□□□□ -0.93
KRR1-204ENST00000550898 COL15A1P39059 1388 aa9.26□□□□□ -0.93
KRR1-204ENST00000550898 TJP1Q07157 1748 aa9.26□□□□□ -0.93
KRR1-204ENST00000550898 CANXP27824 592 aaKnown RBP9.26□□□□□ -0.93
KRR1-204ENST00000550898 SLC4A3P48751 1232 aa9.26□□□□□ -0.93
KRR1-204ENST00000550898 MIS18AQ9NYP9 233 aa9.26□□□□□ -0.93
KRR1-204ENST00000550898 USP42Q9H9J4 1324 aaKnown RBP9.26□□□□□ -0.93
KRR1-204ENST00000550898 COL5A3P25940 1745 aaPredicted RBP9.25□□□□□ -0.93
KRR1-204ENST00000550898 UBR2Q8IWV8 1755 aa9.25□□□□□ -0.93
KRR1-204ENST00000550898 A0A087WZG4 1122 aa9.25□□□□□ -0.93
KRR1-204ENST00000550898 IL6STP40189 918 aaPredicted RBP9.25□□□□□ -0.93
KRR1-204ENST00000550898 EIF4A1P60842 406 aaKnown RBP9.25□□□□□ -0.93
KRR1-204ENST00000550898 KMT5BQ4FZB7 885 aa9.25□□□□□ -0.93
KRR1-204ENST00000550898 SPRYD7Q5W111 196 aa9.25□□□□□ -0.93
KRR1-204ENST00000550898 NLGN1Q8N2Q7 840 aa9.25□□□□□ -0.93
KRR1-204ENST00000550898 LAS1LQ9Y4W2 734 aaKnown RBP9.25□□□□□ -0.93
KRR1-204ENST00000550898 TAF1LQ8IZX4 1826 aa9.25□□□□□ -0.93
KRR1-204ENST00000550898 SIPA1L3O60292 1781 aaPredicted RBP9.24□□□□□ -0.93
KRR1-204ENST00000550898 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
KRR1-204ENST00000550898 ADH1BP00325 375 aa9.24□□□□□ -0.93
KRR1-204ENST00000550898 GYS1P13807 737 aa9.24□□□□□ -0.93
KRR1-204ENST00000550898 HIC1Q14526 733 aa9.24□□□□□ -0.93
KRR1-204ENST00000550898 CCDC27Q2M243 656 aa9.24□□□□□ -0.93
KRR1-204ENST00000550898 SCUBE3Q8IX30 993 aa9.24□□□□□ -0.93
KRR1-204ENST00000550898 FAM9BQ8IZU0 186 aa9.24□□□□□ -0.93
KRR1-204ENST00000550898 ANKLE1Q8NAG6 615 aa9.24□□□□□ -0.93
KRR1-204ENST00000550898 FHDC1Q9C0D6 1143 aaPredicted RBP9.24□□□□□ -0.93
KRR1-204ENST00000550898 ZNF330Q9Y3S2 320 aaPredicted RBP9.24□□□□□ -0.93
KRR1-204ENST00000550898 USP16Q9Y5T5 823 aa9.24□□□□□ -0.93
KRR1-204ENST00000550898 TUBGCP6Q96RT7 1819 aa9.24□□□□□ -0.93
KRR1-204ENST00000550898 PRAMEF22A3QJZ6 481 aa9.23□□□□□ -0.93
KRR1-204ENST00000550898 CCER2I3L3R5 266 aa9.23□□□□□ -0.93
KRR1-204ENST00000550898 CHL1O00533 1208 aa9.23□□□□□ -0.93
KRR1-204ENST00000550898 A1BGP04217 495 aa9.23□□□□□ -0.93
KRR1-204ENST00000550898 MMP10P09238 476 aa9.23□□□□□ -0.93
KRR1-204ENST00000550898 EIF5P55010 431 aaKnown RBP9.23□□□□□ -0.93
KRR1-204ENST00000550898 USPL1Q5W0Q7 1092 aa9.23□□□□□ -0.93
KRR1-204ENST00000550898 DIEXFQ68CQ4 756 aaKnown RBP9.23□□□□□ -0.93
KRR1-204ENST00000550898 IFT57Q9NWB7 429 aa9.23□□□□□ -0.93
KRR1-204ENST00000550898 SRP68Q9UHB9 627 aaKnown RBP9.23□□□□□ -0.93
KRR1-204ENST00000550898 NARFQ9UHQ1 456 aa9.23□□□□□ -0.93
KRR1-204ENST00000550898 UBR3Q6ZT12 1888 aa9.23□□□□□ -0.93
KRR1-204ENST00000550898 OATP04181 439 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms