RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-206	ENST00000550851	TTC41P	Q6P2S7	1318 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	KIAA0232	Q92628	1395 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	FAM135B	Q49AJ0	1406 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	IQGAP3	Q86VI3	1631 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851		A0A1B0GUL7	405 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	ABCC4	O15439	1325 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851		F8W031	263 aa	Predicted RBP	13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	HMGN5	P82970	282 aa	Known RBP	13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	TTLL7	Q6ZT98	887 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	NCOA7	Q8NI08	942 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	AK2	P54819	239 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	MFSD6	Q6ZSS7	791 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	FAM227B	Q96M60	508 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	HMG20B	Q9P0W2	317 aa		13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	NOL7	Q9UMY1	257 aa	Known RBP	13.64	□□□□□ -0.23
LGR5-206	ENST00000550851	LRRIQ1	Q96JM4	1722 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	IGSF1	Q8N6C5	1336 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	GNPAT	O15228	680 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	UQCRFS1P1	P0C7P4	283 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	AATK	Q6ZMQ8	1374 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	TSPY2	A6NKD2	308 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851		Q6ZUG5	572 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	STX8	Q9UNK0	236 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	SYNM	O15061	1565 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	IARS	P41252	1262 aa	Known RBP	13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	RTCB	Q9Y3I0	505 aa	Known RBP	13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	A2ML1	A8K2U0	1454 aa		13.63	□□□□□ -0.23
LGR5-206	ENST00000550851	EYA2	O00167	538 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	DHX8	Q14562	1220 aa	Known RBP	13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	CREB3L3	Q68CJ9	461 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	CEP89	Q96ST8	783 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	RNF41	Q9H4P4	317 aa	Predicted RBP	13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	CCDC196	A0A1B0GTZ2	297 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	KRT18	P05783	430 aa	Known RBP	13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	MCM5	P33992	734 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	ANAPC15	P60006	121 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	VAT1L	Q9HCJ6	419 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	RTL1	A6NKG5	1358 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	ITGA6	P23229	1130 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	SLC4A4	Q9Y6R1	1079 aa		13.62	□□□□□ -0.23
LGR5-206	ENST00000550851	METAP2	P50579	478 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	TPTE2	Q6XPS3	522 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	CEP57L1	Q8IYX8	460 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	WASF1	Q92558	559 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	ARHGAP31	Q2M1Z3	1444 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	ZFY	P08048	801 aa	Predicted RBP	13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	TNNI3K	Q59H18	835 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	SLC26A6	Q9BXS9	759 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	FPGT-TNNI3K	V9GXZ4	949 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	SH3TC1	Q8TE82	1336 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	NPHP4	O75161	1426 aa	Predicted RBP	13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	BIN1	O00499	593 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	SNX21	Q969T3	373 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	CNPY2	Q9Y2B0	182 aa		13.61	□□□□□ -0.23
LGR5-206	ENST00000550851	TAF5L	O75529	589 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	CCDC191	Q8NCU4	936 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	ATP7B	P35670	1465 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	NEURL1B	A8MQ27	555 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	ESPN	B1AK53	854 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	GSPT1	P15170	499 aa	Known RBP	13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	RXRA	P19793	462 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	NAP1L1	P55209	391 aa	Known RBP	13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	TMOD2	Q9NZR1	351 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	RNF17	Q9BXT8	1623 aa	Known RBP	13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	ISM2	Q6H9L7	571 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	KLHL10	Q6JEL2	608 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	USP25	Q9UHP3	1055 aa		13.6	□□□□□ -0.23
LGR5-206	ENST00000550851	OFD1	O75665	1012 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	NAA16	Q6N069	864 aa	Predicted RBP	13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	FSIP1	Q8NA03	581 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	TFCP2L1	Q9NZI6	479 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	CCDC171	Q6TFL3	1326 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	ZSCAN22	P10073	491 aa	Predicted RBP	13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	CATIP	Q7Z7H3	387 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	MAGEB6	Q8N7X4	407 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	ASAP1	Q9ULH1	1129 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	MAP3K4	Q9Y6R4	1608 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	ARAP3	Q8WWN8	1544 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	PDIA4	P13667	645 aa	Known RBP	13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	DNM1	Q05193	864 aa	Known RBP	13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	APOBR	Q0VD83	1088 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	CCDC183	Q5T5S1	534 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	GIMAP6	Q6P9H5	292 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	FAM177A1	Q8N128	213 aa	Predicted RBP	13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	SHROOM2	Q13796	1616 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	RNF113A	O15541	343 aa	Known RBP	13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	SSRP1	Q08945	709 aa	Known RBP	13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	BEND3	Q5T5X7	828 aa		13.59	□□□□□ -0.23
LGR5-206	ENST00000550851	ERBB3	P21860	1342 aa		13.58	□□□□□ -0.23
LGR5-206	ENST00000550851	EPS15	P42566	896 aa		13.58	□□□□□ -0.24
LGR5-206	ENST00000550851	CCAR1	Q8IX12	1150 aa	Known RBP	13.58	□□□□□ -0.24
LGR5-206	ENST00000550851	EAF2	Q96CJ1	260 aa	Predicted RBP	13.58	□□□□□ -0.24
LGR5-206	ENST00000550851	ZNF287	Q9HBT7	754 aa		13.58	□□□□□ -0.24
LGR5-206	ENST00000550851	CCDC96	Q2M329	555 aa		13.58	□□□□□ -0.24

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