RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 IP6K1Q92551 441 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 OGFRQ9NZT2 677 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 GRM8O00222 908 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 KCNQ3O43525 872 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 SASH1O94885 1247 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 TPD52L1Q16890 204 aaPredicted RBP17.73■□□□□ 0.43
PDE1B-207ENST00000550620 LINS1Q8NG48 757 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 DNAJC25Q9H1X3 360 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 NRBP1Q9UHY1 535 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 UTYO14607 1347 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 CTAGE5O15320 804 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
PDE1B-207ENST00000550620 SARM1Q6SZW1 724 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 CCDC8Q9H0W5 538 aaPredicted RBP17.72■□□□□ 0.43
PDE1B-207ENST00000550620 BOLA2Q9H3K6 86 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 H3BQV1 296 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 STK3Q13188 491 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 PLEKHO1Q53GL0 409 aaPredicted RBP17.72■□□□□ 0.43
PDE1B-207ENST00000550620 IFFO2Q5TF58 517 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 SUCLG2Q96I99 432 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 PGBD1Q96JS3 809 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 TCEANC2Q96MN5 208 aa17.72■□□□□ 0.43
PDE1B-207ENST00000550620 MARF1Q9Y4F3 1742 aaKnown RBP17.71■□□□□ 0.43
PDE1B-207ENST00000550620 RESTQ13127 1097 aa17.71■□□□□ 0.43
PDE1B-207ENST00000550620 CWF19L2Q2TBE0 894 aaKnown RBP17.71■□□□□ 0.43
PDE1B-207ENST00000550620 ZNF530Q6P9A1 599 aaPredicted RBP17.71■□□□□ 0.43
PDE1B-207ENST00000550620 NCAPD2Q15021 1401 aa17.71■□□□□ 0.43
PDE1B-207ENST00000550620 MRFAP1L1Q96HT8 127 aa17.7■□□□□ 0.42
PDE1B-207ENST00000550620 AMOTQ4VCS5 1084 aa17.7■□□□□ 0.42
PDE1B-207ENST00000550620 NBPF6Q5VWK0 638 aa17.7■□□□□ 0.42
PDE1B-207ENST00000550620 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
PDE1B-207ENST00000550620 C14orf37Q86TY3 774 aa17.7■□□□□ 0.42
PDE1B-207ENST00000550620 CACTINQ8WUQ7 758 aaKnown RBP17.7■□□□□ 0.42
PDE1B-207ENST00000550620 NBPF4Q96M43 638 aa17.7■□□□□ 0.42
PDE1B-207ENST00000550620 NEK1Q96PY6 1258 aa17.7■□□□□ 0.42
PDE1B-207ENST00000550620 BICC1Q9H694 974 aaKnown RBP17.7■□□□□ 0.42
PDE1B-207ENST00000550620 RGPD8O14715 1765 aaPredicted RBP17.69■□□□□ 0.42
PDE1B-207ENST00000550620 STX1AQ16623 288 aa17.69■□□□□ 0.42
PDE1B-207ENST00000550620 BRF1Q92994 677 aa17.69■□□□□ 0.42
PDE1B-207ENST00000550620 OVOS2A0A0G2JMS6 1433 aa17.69■□□□□ 0.42
PDE1B-207ENST00000550620 TAF5LO75529 589 aa17.69■□□□□ 0.42
PDE1B-207ENST00000550620 CEP135Q66GS9 1140 aa17.69■□□□□ 0.42
PDE1B-207ENST00000550620 TLR7Q9NYK1 1049 aaKnown RBP17.69■□□□□ 0.42
PDE1B-207ENST00000550620 HSP90B1P14625 803 aaKnown RBP17.68■□□□□ 0.42
PDE1B-207ENST00000550620 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
PDE1B-207ENST00000550620 COL9A3Q14050 684 aaPredicted RBP17.68■□□□□ 0.42
PDE1B-207ENST00000550620 C1orf141Q5JVX7 400 aa17.68■□□□□ 0.42
PDE1B-207ENST00000550620 ZNF589Q86UQ0 364 aaPredicted RBP17.68■□□□□ 0.42
PDE1B-207ENST00000550620 LRRC8AQ8IWT6 810 aa17.68■□□□□ 0.42
PDE1B-207ENST00000550620 LMO7Q8WWI1 1683 aa17.68■□□□□ 0.42
PDE1B-207ENST00000550620 RFX7Q2KHR2 1363 aa17.68■□□□□ 0.42
PDE1B-207ENST00000550620 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
PDE1B-207ENST00000550620 JAK2O60674 1132 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 IQCB1Q15051 598 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 MPRIPQ6WCQ1 1025 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 LLPHQ9BRT6 129 aaKnown RBP17.67■□□□□ 0.42
PDE1B-207ENST00000550620 CTNNA3Q9UI47 895 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
PDE1B-207ENST00000550620 PROSER3Q2NL68 480 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 CCDC144BQ3MJ40 725 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 CCDC144CPQ8IYA2 1237 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 KAZALD1Q96I82 304 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 TAF6LQ9Y6J9 622 aa17.67■□□□□ 0.42
PDE1B-207ENST00000550620 MRC1P22897 1456 aa17.66■□□□□ 0.42
PDE1B-207ENST00000550620 BECN2A8MW95 431 aa17.66■□□□□ 0.42
PDE1B-207ENST00000550620 HEG1Q9ULI3 1381 aa17.66■□□□□ 0.42
PDE1B-207ENST00000550620 GABPB1Q06547 395 aaPredicted RBP17.66■□□□□ 0.42
PDE1B-207ENST00000550620 ATL3Q6DD88 541 aa17.66■□□□□ 0.42
PDE1B-207ENST00000550620 Q6ZUG5 572 aa17.66■□□□□ 0.42
PDE1B-207ENST00000550620 SIL1Q9H173 461 aa17.66■□□□□ 0.42
PDE1B-207ENST00000550620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.66■□□□□ 0.42
PDE1B-207ENST00000550620 NAA16Q6N069 864 aaPredicted RBP17.65■□□□□ 0.42
PDE1B-207ENST00000550620 CCDC73Q6ZRK6 1079 aa17.65■□□□□ 0.42
PDE1B-207ENST00000550620 KCNH5Q8NCM2 988 aa17.65■□□□□ 0.42
PDE1B-207ENST00000550620 HMGB1P09429 215 aaKnown RBP17.64■□□□□ 0.42
PDE1B-207ENST00000550620 ATP5JP18859 108 aa17.64■□□□□ 0.42
PDE1B-207ENST00000550620 PTPN14Q15678 1187 aa17.64■□□□□ 0.42
PDE1B-207ENST00000550620 SMARCC2Q8TAQ2 1214 aa17.64■□□□□ 0.42
PDE1B-207ENST00000550620 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.42
PDE1B-207ENST00000550620 ANO10Q9NW15 660 aa17.64■□□□□ 0.42
PDE1B-207ENST00000550620 DDX41Q9UJV9 622 aaKnown RBP17.64■□□□□ 0.42
PDE1B-207ENST00000550620 NEXNQ0ZGT2 675 aa17.64■□□□□ 0.41
PDE1B-207ENST00000550620 CCAR1Q8IX12 1150 aaKnown RBP17.64■□□□□ 0.41
PDE1B-207ENST00000550620 ZNF592Q92610 1267 aa17.64■□□□□ 0.41
PDE1B-207ENST00000550620 RCOR1Q9UKL0 485 aa17.64■□□□□ 0.41
PDE1B-207ENST00000550620 KINO60870 393 aaKnown RBP17.63■□□□□ 0.41
PDE1B-207ENST00000550620 FGD1P98174 961 aa17.63■□□□□ 0.41
PDE1B-207ENST00000550620 C11orf57Q6ZUT1 292 aaPredicted RBP17.63■□□□□ 0.41
PDE1B-207ENST00000550620 ZNF396Q96N95 335 aaPredicted RBP17.63■□□□□ 0.41
PDE1B-207ENST00000550620 NFAT5O94916 1531 aa17.63■□□□□ 0.41
PDE1B-207ENST00000550620 KIF2AO00139 706 aaPredicted RBP17.63■□□□□ 0.41
PDE1B-207ENST00000550620 SKILP12757 684 aa17.63■□□□□ 0.41
PDE1B-207ENST00000550620 NAT10Q9H0A0 1025 aaKnown RBP17.63■□□□□ 0.41
PDE1B-207ENST00000550620 LTN1O94822 1766 aa17.63■□□□□ 0.41
PDE1B-207ENST00000550620 PFKFB2O60825 505 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 GSDMDP57764 484 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 NYAP1Q6ZVC0 841 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 RIC3Q7Z5B4 369 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms