RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 LRCH3Q96II8 777 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 COG3Q96JB2 828 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 ZFRQ96KR1 1074 aaKnown RBP2.11□□□□□ -2.07
LGR5-205ENST00000549015 DRC1Q96MC2 740 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 PLEKHF1Q96S99 279 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 CRBNQ96SW2 442 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 ARHGAP9Q9BRR9 750 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 ANP32EQ9BTT0 268 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 MKNK1Q9BUB5 465 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 BACH2Q9BYV9 841 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 IGSF5Q9NSI5 407 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 BABAM1Q9NWV8 329 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 CABP1Q9NZU7 370 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 DDX19BQ9UMR2 479 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 DOLKQ9UPQ8 538 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 AXIN2Q9Y2T1 843 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 GPSM3Q9Y4H4 160 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 PXDNLA1KZ92 1463 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 KIF1AQ12756 1690 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 ERBB3P21860 1342 aa2.11□□□□□ -2.07
LGR5-205ENST00000549015 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.11□□□□□ -2.07
LGR5-205ENST00000549015 IBTKQ9P2D0 1353 aaPredicted RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 MED1Q15648 1581 aaPredicted RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 MAGEB6P1A0A0J9YX57 407 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 HTATSF1O43719 755 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 ICMTO60725 284 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 F12P00748 615 aaPredicted RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 JUNDP17535 347 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 IL13P35225 146 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 PPP4CP60510 307 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 ZC3H6P61129 1189 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 GTF2IP78347 998 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 HDAC1Q13547 482 aaPredicted RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 MTMR3Q13615 1198 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 MVPQ14764 893 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 TSGA10IPQ3SY00 556 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 NOM1Q5C9Z4 860 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 VARS2Q5ST30 1063 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 DMRTA1Q5VZB9 504 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 CCDC102BQ68D86 513 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 BRICD5Q6PL45 260 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 ATF7IPQ6VMQ6 1270 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 MAMSTRQ6ZN01 415 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 NPAS4Q8IUM7 802 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 FTSJ3Q8IY81 847 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 CCDC146Q8IYE0 955 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 PHTF2Q8N3S3 785 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 CCDC24Q8N4L8 307 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 MRPL50Q8N5N7 158 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 C1orf216Q8TAB5 229 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 GTF3C2Q8WUA4 911 aaPredicted RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 SREK1Q8WXA9 508 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 GPKOWQ92917 476 aaPredicted RBP eCLIP2.1□□□□□ -2.07
LGR5-205ENST00000549015 IPO9Q96P70 1041 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 NUDT12Q9BQG2 462 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 API5Q9BZZ5 524 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 GGNBP2Q9H3C7 697 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 RWDD1Q9H446 243 aaPredicted RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 UPF2Q9HAU5 1272 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 EVA1BQ9NVM1 165 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 CXXC1Q9P0U4 656 aaPredicted RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 STK26Q9P289 416 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 POLKQ9UBT6 870 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 SEPT3Q9UH03 358 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 EGFL7Q9UHF1 273 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 VPS9D1Q9Y2B5 631 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 NOP58Q9Y2X3 529 aaKnown RBP2.1□□□□□ -2.07
LGR5-205ENST00000549015 PCDHB3Q9Y5E6 796 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 SLIT3O75094 1523 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 PTPRCP08575 1304 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 IGSF1Q8N6C5 1336 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 PRR36Q9H6K5 1346 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 MSH6P52701 1360 aa2.1□□□□□ -2.07
LGR5-205ENST00000549015 NPHP4O75161 1426 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 PIK3C2AO00443 1686 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 CAMTA1Q9Y6Y1 1673 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 NFAT5O94916 1531 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 GOLGA8CPA6NN73 597 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 SFI1A8K8P3 1242 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 U2SURPO15042 1029 aaKnown RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 PPM1GO15355 546 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 C21orf2O43822 256 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 GIGYF1O75420 1035 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 HOXB7P09629 217 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 ZNF853P0CG23 659 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 POTEJP0CG39 1038 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 ERCC5P28715 1186 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 LTKP29376 864 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 PRKAR2BP31323 418 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 RIPK4P57078 832 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 RAB15P59190 212 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 TAGLNQ01995 201 aaKnown RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 FKBP4Q02790 459 aaKnown RBP eCLIP2.09□□□□□ -2.07
LGR5-205ENST00000549015 USP4Q13107 963 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 CNGB1Q14028 1251 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 SAFB2Q14151 953 aaKnown RBP eCLIP2.09□□□□□ -2.07
LGR5-205ENST00000549015 MLECQ14165 292 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 NAA30Q147X3 362 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 OCLNQ16625 522 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms