RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 RIC3Q7Z5B4 369 aa16.76■□□□□ 0.27
RAPGEF3-218ENST00000548919 SNRKQ9NRH2 765 aa16.76■□□□□ 0.27
RAPGEF3-218ENST00000548919 COL15A1P39059 1388 aa16.76■□□□□ 0.27
RAPGEF3-218ENST00000548919 GOLGA6L6A8MZA4 724 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 ANKRD1Q15327 319 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 AMOTQ4VCS5 1084 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 CCDC129Q6ZRS4 1044 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 CCDC186Q7Z3E2 898 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 PGBD1Q96JS3 809 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 SCAND2PQ9GZW5 306 aaPredicted RBP16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 TAF5LO75529 589 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 DRC7Q8IY82 874 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 HDAC5Q9UQL6 1122 aa16.75■□□□□ 0.27
RAPGEF3-218ENST00000548919 UTYO14607 1347 aa16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 SEC62Q99442 399 aaKnown RBP16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 LRRC2Q9BYS8 371 aa16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 DDX21Q9NR30 783 aaKnown RBP eCLIP16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 DDX58O95786 925 aaKnown RBP16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 FOSBP53539 338 aa16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 BICD2Q8TD16 824 aa16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 DNAJC25Q9H1X3 360 aa16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 PRDM4Q9UKN5 801 aa16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
RAPGEF3-218ENST00000548919 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
RAPGEF3-218ENST00000548919 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
RAPGEF3-218ENST00000548919 KCNH5Q8NCM2 988 aa16.73■□□□□ 0.27
RAPGEF3-218ENST00000548919 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
RAPGEF3-218ENST00000548919 TRIM5Q9C035 493 aa16.73■□□□□ 0.27
RAPGEF3-218ENST00000548919 TPM3P06753 285 aa16.73■□□□□ 0.27
RAPGEF3-218ENST00000548919 PPP4R3BQ5MIZ7 849 aa16.73■□□□□ 0.27
RAPGEF3-218ENST00000548919 BRF1Q92994 677 aa16.73■□□□□ 0.27
RAPGEF3-218ENST00000548919 CLSTN2Q9H4D0 955 aa16.73■□□□□ 0.27
RAPGEF3-218ENST00000548919 GCP02774 474 aa16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 CBX1P83916 185 aa16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 MYD88Q99836 296 aa16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 AXIN2Q9Y2T1 843 aa16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 NEURL1BA8MQ27 555 aa16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 HSP90B1P14625 803 aaKnown RBP16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 CHAF1AQ13111 956 aaPredicted RBP16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 Q6ZUG5 572 aa16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 KLHL34Q8N239 644 aa16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 XAGE3Q8WTP9 111 aa16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 GTF3C6Q969F1 213 aa16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 DNAJC2Q99543 621 aaKnown RBP16.72■□□□□ 0.27
RAPGEF3-218ENST00000548919 PPFIA3O75145 1194 aa16.71■□□□□ 0.27
RAPGEF3-218ENST00000548919 TFCP2Q12800 502 aa16.71■□□□□ 0.27
RAPGEF3-218ENST00000548919 GCKRQ14397 625 aa16.71■□□□□ 0.27
RAPGEF3-218ENST00000548919 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
RAPGEF3-218ENST00000548919 C16orf45Q96MC5 204 aaPredicted RBP16.71■□□□□ 0.27
RAPGEF3-218ENST00000548919 DDX19AQ9NUU7 478 aaKnown RBP16.71■□□□□ 0.27
RAPGEF3-218ENST00000548919 HMG20BQ9P0W2 317 aa16.71■□□□□ 0.27
RAPGEF3-218ENST00000548919 ZNF165P49910 485 aa16.71■□□□□ 0.26
RAPGEF3-218ENST00000548919 ZNF75DP51815 510 aa16.71■□□□□ 0.26
RAPGEF3-218ENST00000548919 COPS6Q7L5N1 327 aa16.71■□□□□ 0.26
RAPGEF3-218ENST00000548919 ARHGEF25Q86VW2 580 aa16.71■□□□□ 0.26
RAPGEF3-218ENST00000548919 NEK1Q96PY6 1258 aa16.71■□□□□ 0.26
RAPGEF3-218ENST00000548919 ALDH8A1Q9H2A2 487 aaPredicted RBP16.71■□□□□ 0.26
RAPGEF3-218ENST00000548919 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
RAPGEF3-218ENST00000548919 SMAP1Q8IYB5 467 aaPredicted RBP16.7■□□□□ 0.26
RAPGEF3-218ENST00000548919 FTOQ9C0B1 505 aaKnown RBP eCLIP16.7■□□□□ 0.26
RAPGEF3-218ENST00000548919 H3BQV1 296 aa16.7■□□□□ 0.26
RAPGEF3-218ENST00000548919 RESTQ13127 1097 aa16.7■□□□□ 0.26
RAPGEF3-218ENST00000548919 TSGA10IPQ3SY00 556 aa16.7■□□□□ 0.26
RAPGEF3-218ENST00000548919 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
RAPGEF3-218ENST00000548919 RBM43Q6ZSC3 357 aaKnown RBP16.7■□□□□ 0.26
RAPGEF3-218ENST00000548919 JCADQ9P266 1359 aa16.7■□□□□ 0.26
RAPGEF3-218ENST00000548919 A0A087WWV3 80 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 CYP21A2P08686 494 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 NEXNQ0ZGT2 675 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 PLA2G4DQ86XP0 818 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 ORAI2Q96SN7 254 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 NCAPD2Q15021 1401 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 SPDYE4A6NLX3 237 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 PDIA4P13667 645 aaKnown RBP16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 ZSCAN25Q6NSZ9 544 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 ZNF609O15014 1411 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 ADGRL3Q9HAR2 1447 aa16.69■□□□□ 0.26
RAPGEF3-218ENST00000548919 SCRN1Q12765 414 aa16.68■□□□□ 0.26
RAPGEF3-218ENST00000548919 TNNI3KQ59H18 835 aa16.68■□□□□ 0.26
RAPGEF3-218ENST00000548919 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
RAPGEF3-218ENST00000548919 DBNDD2Q9BQY9 259 aa16.68■□□□□ 0.26
RAPGEF3-218ENST00000548919 BCL11BQ9C0K0 894 aaPredicted RBP16.68■□□□□ 0.26
RAPGEF3-218ENST00000548919 FPGT-TNNI3KV9GXZ4 949 aa16.68■□□□□ 0.26
RAPGEF3-218ENST00000548919 CCDC144BQ3MJ40 725 aa16.68■□□□□ 0.26
RAPGEF3-218ENST00000548919 CCDC144CPQ8IYA2 1237 aa16.68■□□□□ 0.26
RAPGEF3-218ENST00000548919 TDRD7Q8NHU6 1098 aaKnown RBP16.68■□□□□ 0.26
RAPGEF3-218ENST00000548919 ATP5JP18859 108 aa16.67■□□□□ 0.26
RAPGEF3-218ENST00000548919 FGD1P98174 961 aa16.67■□□□□ 0.26
RAPGEF3-218ENST00000548919 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
RAPGEF3-218ENST00000548919 PDCL2Q8N4E4 241 aa16.67■□□□□ 0.26
RAPGEF3-218ENST00000548919 CLIP2Q9UDT6 1046 aa16.67■□□□□ 0.26
RAPGEF3-218ENST00000548919 STOX1Q6ZVD7 989 aa16.67■□□□□ 0.26
RAPGEF3-218ENST00000548919 UBE3BQ7Z3V4 1068 aa16.67■□□□□ 0.26
RAPGEF3-218ENST00000548919 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms