RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 TYRO3Q06418 890 aa16.69■□□□□ 0.26
CACNB3-209ENST00000548860 TTC6Q86TZ1 520 aa16.69■□□□□ 0.26
CACNB3-209ENST00000548860 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
CACNB3-209ENST00000548860 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 ARHGEF28Q8N1W1 1705 aaKnown RBP16.68■□□□□ 0.26
CACNB3-209ENST00000548860 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 TBX22Q9Y458 520 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 ATP10DQ9P241 1426 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
CACNB3-209ENST00000548860 ANKRD1Q15327 319 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 PTPN21Q16825 1174 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 EPHA10Q5JZY3 1008 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 AXIN2Q9Y2T1 843 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 NRDCO43847 1150 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 MTMR6Q9Y217 621 aa16.68■□□□□ 0.26
CACNB3-209ENST00000548860 MARCKSP29966 332 aaPredicted RBP16.67■□□□□ 0.26
CACNB3-209ENST00000548860 COL9A3Q14050 684 aaPredicted RBP16.67■□□□□ 0.26
CACNB3-209ENST00000548860 CCAR1Q8IX12 1150 aaKnown RBP16.67■□□□□ 0.26
CACNB3-209ENST00000548860 ZC3H13Q5T200 1668 aaKnown RBP16.67■□□□□ 0.26
CACNB3-209ENST00000548860 NUP133Q8WUM0 1156 aa16.67■□□□□ 0.26
CACNB3-209ENST00000548860 OSBPL3Q9H4L5 887 aa16.67■□□□□ 0.26
CACNB3-209ENST00000548860 NRBP1Q9UHY1 535 aa16.67■□□□□ 0.26
CACNB3-209ENST00000548860 CCDC158Q5M9N0 1113 aa16.67■□□□□ 0.26
CACNB3-209ENST00000548860 SASH1O94885 1247 aa16.66■□□□□ 0.26
CACNB3-209ENST00000548860 CDK11BP21127 795 aaKnown RBP16.66■□□□□ 0.26
CACNB3-209ENST00000548860 HSPA2P54652 639 aa16.66■□□□□ 0.26
CACNB3-209ENST00000548860 FAM89AQ96GI7 184 aa16.66■□□□□ 0.26
CACNB3-209ENST00000548860 ATP7BP35670 1465 aa16.66■□□□□ 0.26
CACNB3-209ENST00000548860 MICU3Q86XE3 530 aa16.66■□□□□ 0.26
CACNB3-209ENST00000548860 PPP4R3BQ5MIZ7 849 aa16.66■□□□□ 0.26
CACNB3-209ENST00000548860 ZNF771Q7L3S4 317 aaPredicted RBP16.66■□□□□ 0.26
CACNB3-209ENST00000548860 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
CACNB3-209ENST00000548860 CDK12Q9NYV4 1490 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-209ENST00000548860 METTL24Q5JXM2 366 aa16.65■□□□□ 0.26
CACNB3-209ENST00000548860 RASSF8Q8NHQ8 419 aa16.65■□□□□ 0.26
CACNB3-209ENST00000548860 SCAND2PQ9GZW5 306 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-209ENST00000548860 PDCL3Q9H2J4 239 aa16.65■□□□□ 0.26
CACNB3-209ENST00000548860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-209ENST00000548860 A0A1B0GVL5 298 aa16.65■□□□□ 0.26
CACNB3-209ENST00000548860 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
CACNB3-209ENST00000548860 GPHNQ9NQX3 736 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-209ENST00000548860 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
CACNB3-209ENST00000548860 TNNT1P13805 278 aa16.65■□□□□ 0.26
CACNB3-209ENST00000548860 NR1I2O75469 434 aa16.64■□□□□ 0.25
CACNB3-209ENST00000548860 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
CACNB3-209ENST00000548860 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
CACNB3-209ENST00000548860 SNRPA1P09661 255 aaKnown RBP16.64■□□□□ 0.25
CACNB3-209ENST00000548860 IFNL2Q8IZJ0 200 aa16.64■□□□□ 0.25
CACNB3-209ENST00000548860 STAP2Q9UGK3 403 aa16.64■□□□□ 0.25
CACNB3-209ENST00000548860 MED14O60244 1454 aa16.64■□□□□ 0.25
CACNB3-209ENST00000548860 CUL4AQ13619 759 aa16.64■□□□□ 0.25
CACNB3-209ENST00000548860 TRIM29Q14134 588 aa16.64■□□□□ 0.25
CACNB3-209ENST00000548860 TTLL7Q6ZT98 887 aa16.64■□□□□ 0.25
CACNB3-209ENST00000548860 PYCARDQ9ULZ3 195 aa16.64■□□□□ 0.25
CACNB3-209ENST00000548860 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
CACNB3-209ENST00000548860 CYP2E1P05181 493 aaPredicted RBP16.63■□□□□ 0.25
CACNB3-209ENST00000548860 GCKRQ14397 625 aa16.63■□□□□ 0.25
CACNB3-209ENST00000548860 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
CACNB3-209ENST00000548860 ALDH1L1O75891 902 aa16.63■□□□□ 0.25
CACNB3-209ENST00000548860 CFAP45Q9UL16 551 aa16.63■□□□□ 0.25
CACNB3-209ENST00000548860 ARHGEF10O15013 1369 aa16.63■□□□□ 0.25
CACNB3-209ENST00000548860 TTC41PQ6P2S7 1318 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
CACNB3-209ENST00000548860 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-209ENST00000548860 CCDC112Q8NEF3 446 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 C8orf76Q96K31 380 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 DBNLQ9UJU6 430 aaKnown RBP16.62■□□□□ 0.25
CACNB3-209ENST00000548860 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 TPM4P67936 248 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 MCMDC2Q4G0Z9 681 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 TNNI3KQ59H18 835 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 PI16Q6UXB8 463 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 FPGT-TNNI3KV9GXZ4 949 aa16.62■□□□□ 0.25
CACNB3-209ENST00000548860 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 RPS6KB1P23443 525 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 LRRC24Q50LG9 513 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 MYL10Q9BUA6 226 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 ORC3Q9UBD5 711 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-209ENST00000548860 SERPINC1P01008 464 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 PUS3Q9BZE2 481 aaKnown RBP16.61■□□□□ 0.25
CACNB3-209ENST00000548860 MAP2P11137 1827 aaKnown RBP16.61■□□□□ 0.25
CACNB3-209ENST00000548860 CRB1P82279 1406 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 CPLX2Q6PUV4 134 aaKnown RBP16.61■□□□□ 0.25
CACNB3-209ENST00000548860 LDHAL6AQ6ZMR3 332 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 AOPEPQ8N6M6 819 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 FAM200AQ8TCP9 573 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 NEURL1BA8MQ27 555 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 KRT32Q14532 448 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 SPECC1Q5M775 1068 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 CBX8Q9HC52 389 aa16.61■□□□□ 0.25
CACNB3-209ENST00000548860 ARHGAP31Q2M1Z3 1444 aa16.6■□□□□ 0.25
CACNB3-209ENST00000548860 PAG1Q9NWQ8 432 aa16.6■□□□□ 0.25
CACNB3-209ENST00000548860 MINDY4BA8MYZ0 360 aa16.6■□□□□ 0.25
CACNB3-209ENST00000548860 HMGN5P82970 282 aaKnown RBP16.6■□□□□ 0.25
CACNB3-209ENST00000548860 LEO1Q8WVC0 666 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-209ENST00000548860 ZKSCAN3Q9BRR0 538 aa16.6■□□□□ 0.25
CACNB3-209ENST00000548860 TBC1D2BQ9UPU7 963 aa16.6■□□□□ 0.25
CACNB3-209ENST00000548860 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms