RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 H2AFXP16104 143 aaPredicted RBP12.59□□□□□ -0.39
NPAS3-205ENST00000547068 RAD51AP2Q09MP3 1159 aa12.59□□□□□ -0.39
NPAS3-205ENST00000547068 CDC37L1Q7L3B6 337 aa12.59□□□□□ -0.39
NPAS3-205ENST00000547068 CCAR2Q8N163 923 aaKnown RBP12.59□□□□□ -0.39
NPAS3-205ENST00000547068 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.59□□□□□ -0.39
NPAS3-205ENST00000547068 FHOD1Q9Y613 1164 aa12.59□□□□□ -0.39
NPAS3-205ENST00000547068 CCDC69A6NI79 296 aa12.59□□□□□ -0.39
NPAS3-205ENST00000547068 KIF2AO00139 706 aaPredicted RBP12.59□□□□□ -0.39
NPAS3-205ENST00000547068 CAVIN2O95810 425 aa12.59□□□□□ -0.39
NPAS3-205ENST00000547068 ERCC6LQ2NKX8 1250 aa12.59□□□□□ -0.39
NPAS3-205ENST00000547068 MRFAP1L1Q96HT8 127 aa12.59□□□□□ -0.39
NPAS3-205ENST00000547068 JAKMIP1Q96N16 626 aaKnown RBP12.59□□□□□ -0.39
NPAS3-205ENST00000547068 SPG7Q9UQ90 795 aa12.59□□□□□ -0.39
NPAS3-205ENST00000547068 USP54Q70EL1 1684 aa12.58□□□□□ -0.39
NPAS3-205ENST00000547068 AMPHP49418 695 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 ME3Q16798 604 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 TEX35Q5T0J7 233 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 SARM1Q6SZW1 724 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 CWC27Q6UX04 472 aaKnown RBP12.58□□□□□ -0.4
NPAS3-205ENST00000547068 NECAB1Q8N987 351 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 TFIP11Q9UBB9 837 aaKnown RBP12.58□□□□□ -0.4
NPAS3-205ENST00000547068 NR1I2O75469 434 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 ST3GAL1Q11201 340 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 FILIP1Q7Z7B0 1213 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 CNTROBQ8N137 903 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 BICD2Q8TD16 824 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 CABLES1Q8TDN4 633 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 CYP46A1Q9Y6A2 500 aa12.58□□□□□ -0.4
NPAS3-205ENST00000547068 PNMA6AP0CW24 399 aaPredicted RBP12.57□□□□□ -0.4
NPAS3-205ENST00000547068 CLCN6P51797 869 aa12.57□□□□□ -0.4
NPAS3-205ENST00000547068 CCZ1BP86790 482 aa12.57□□□□□ -0.4
NPAS3-205ENST00000547068 CCZ1P86791 482 aaPredicted RBP12.57□□□□□ -0.4
NPAS3-205ENST00000547068 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
NPAS3-205ENST00000547068 PDCP20941 246 aa12.57□□□□□ -0.4
NPAS3-205ENST00000547068 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
NPAS3-205ENST00000547068 PLA2G4AP47712 749 aa12.56□□□□□ -0.4
NPAS3-205ENST00000547068 IQCB1Q15051 598 aa12.56□□□□□ -0.4
NPAS3-205ENST00000547068 PI4K2BQ8TCG2 481 aa12.56□□□□□ -0.4
NPAS3-205ENST00000547068 LEO1Q8WVC0 666 aaPredicted RBP12.56□□□□□ -0.4
NPAS3-205ENST00000547068 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
NPAS3-205ENST00000547068 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
NPAS3-205ENST00000547068 LRRFIP2Q9Y608 721 aaKnown RBP12.56□□□□□ -0.4
NPAS3-205ENST00000547068 MARF1Q9Y4F3 1742 aaKnown RBP12.56□□□□□ -0.4
NPAS3-205ENST00000547068 TNNT3P45378 269 aaPredicted RBP12.56□□□□□ -0.4
NPAS3-205ENST00000547068 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
NPAS3-205ENST00000547068 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
NPAS3-205ENST00000547068 SNW1Q13573 536 aaKnown RBP12.56□□□□□ -0.4
NPAS3-205ENST00000547068 PRPF40BQ6NWY9 871 aaKnown RBP12.56□□□□□ -0.4
NPAS3-205ENST00000547068 L2HGDHQ9H9P8 463 aa12.56□□□□□ -0.4
NPAS3-205ENST00000547068 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
NPAS3-205ENST00000547068 TPM4P67936 248 aa12.55□□□□□ -0.4
NPAS3-205ENST00000547068 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
NPAS3-205ENST00000547068 TXLNBQ8N3L3 684 aa12.55□□□□□ -0.4
NPAS3-205ENST00000547068 NEK11Q8NG66 645 aa12.55□□□□□ -0.4
NPAS3-205ENST00000547068 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
NPAS3-205ENST00000547068 SLIT3O75094 1523 aa12.55□□□□□ -0.4
NPAS3-205ENST00000547068 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
NPAS3-205ENST00000547068 BECN2A8MW95 431 aa12.55□□□□□ -0.4
NPAS3-205ENST00000547068 POLR3GO15318 223 aaPredicted RBP12.55□□□□□ -0.4
NPAS3-205ENST00000547068 ARHGAP29Q52LW3 1261 aa12.55□□□□□ -0.4
NPAS3-205ENST00000547068 TM6SF1Q9BZW5 370 aa12.55□□□□□ -0.4
NPAS3-205ENST00000547068 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
NPAS3-205ENST00000547068 C11orf57Q6ZUT1 292 aaPredicted RBP12.54□□□□□ -0.4
NPAS3-205ENST00000547068 ARHGEF25Q86VW2 580 aa12.54□□□□□ -0.4
NPAS3-205ENST00000547068 DDX54Q8TDD1 881 aaKnown RBP12.54□□□□□ -0.4
NPAS3-205ENST00000547068 STK31Q9BXU1 1019 aa12.54□□□□□ -0.4
NPAS3-205ENST00000547068 ARGLU1Q9NWB6 273 aaPredicted RBP12.54□□□□□ -0.4
NPAS3-205ENST00000547068 TPCN1Q9ULQ1 816 aa12.54□□□□□ -0.4
NPAS3-205ENST00000547068 MED1Q15648 1581 aaPredicted RBP12.54□□□□□ -0.4
NPAS3-205ENST00000547068 TMCO3Q6UWJ1 677 aa12.54□□□□□ -0.4
NPAS3-205ENST00000547068 LRRN4CLQ8ND94 238 aa12.54□□□□□ -0.4
NPAS3-205ENST00000547068 PGBD1Q96JS3 809 aa12.54□□□□□ -0.4
NPAS3-205ENST00000547068 FLT4P35916 1363 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 RAB11FIP3O75154 756 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 SURF6O75683 361 aaKnown RBP12.53□□□□□ -0.4
NPAS3-205ENST00000547068 PTH1RQ03431 593 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 SYT10Q6XYQ8 523 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 RUFY2Q8WXA3 655 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 ZKSCAN1P17029 563 aaPredicted RBP12.53□□□□□ -0.4
NPAS3-205ENST00000547068 GSDMDP57764 484 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 STX1AQ16623 288 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 CCDC93Q567U6 631 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 KRBA2Q6ZNG9 492 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 RHPN1Q8TCX5 695 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 IP6K1Q92551 441 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 RASSF4Q9H2L5 321 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 TSPYL4Q9UJ04 414 aa12.53□□□□□ -0.4
NPAS3-205ENST00000547068 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.53□□□□□ -0.4
NPAS3-205ENST00000547068 ZRANB2O95218 330 aaKnown RBP eCLIP12.52□□□□□ -0.4
NPAS3-205ENST00000547068 HOXC9P31274 260 aa12.52□□□□□ -0.4
NPAS3-205ENST00000547068 HSPA1LP34931 641 aa12.52□□□□□ -0.4
NPAS3-205ENST00000547068 FLIIQ13045 1269 aa12.52□□□□□ -0.4
NPAS3-205ENST00000547068 HSP90AB2PQ58FF8 381 aa12.52□□□□□ -0.4
NPAS3-205ENST00000547068 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.4
NPAS3-205ENST00000547068 EFCC1Q9HA90 598 aa12.52□□□□□ -0.4
NPAS3-205ENST00000547068 NFAT5O94916 1531 aa12.52□□□□□ -0.4
NPAS3-205ENST00000547068 JCADQ9P266 1359 aa12.52□□□□□ -0.41
NPAS3-205ENST00000547068 PHRF1Q9P1Y6 1649 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms