RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 THBS1P07996 1170 aa10.31□□□□□ -0.76
NPAS3-204ENST00000546849 RBM25P49756 843 aaKnown RBP10.31□□□□□ -0.76
NPAS3-204ENST00000546849 SPEM2Q0P670 501 aa10.31□□□□□ -0.76
NPAS3-204ENST00000546849 NLRP13Q86W25 1043 aa10.31□□□□□ -0.76
NPAS3-204ENST00000546849 ALKBH8Q96BT7 664 aaKnown RBP10.31□□□□□ -0.76
NPAS3-204ENST00000546849 ELP3Q9H9T3 547 aa10.31□□□□□ -0.76
NPAS3-204ENST00000546849 PHACTR2O75167 634 aa10.3□□□□□ -0.76
NPAS3-204ENST00000546849 RARAP10276 462 aa10.3□□□□□ -0.76
NPAS3-204ENST00000546849 PNMA6FA0A0J9YX94 578 aa10.29□□□□□ -0.76
NPAS3-204ENST00000546849 SASH3O75995 380 aa10.29□□□□□ -0.76
NPAS3-204ENST00000546849 P4HBP07237 508 aaKnown RBP10.29□□□□□ -0.76
NPAS3-204ENST00000546849 BMP4P12644 408 aa10.29□□□□□ -0.76
NPAS3-204ENST00000546849 UBAP2LQ14157 1087 aaKnown RBP10.29□□□□□ -0.76
NPAS3-204ENST00000546849 NPM2Q86SE8 214 aaKnown RBP10.29□□□□□ -0.76
NPAS3-204ENST00000546849 BHMTQ93088 406 aa10.29□□□□□ -0.76
NPAS3-204ENST00000546849 CNTNAP3BQ96NU0 1288 aa10.29□□□□□ -0.76
NPAS3-204ENST00000546849 CNTNAP3Q9BZ76 1288 aa10.29□□□□□ -0.76
NPAS3-204ENST00000546849 STRN4Q9NRL3 753 aa10.29□□□□□ -0.76
NPAS3-204ENST00000546849 ABI2Q9NYB9 513 aaPredicted RBP10.29□□□□□ -0.76
NPAS3-204ENST00000546849 NSFL1CQ9UNZ2 370 aaKnown RBP10.29□□□□□ -0.76
NPAS3-204ENST00000546849 EGFRP00533 1210 aa10.28□□□□□ -0.76
NPAS3-204ENST00000546849 LDHBP07195 334 aaKnown RBP10.28□□□□□ -0.76
NPAS3-204ENST00000546849 NFKB1P19838 968 aa10.28□□□□□ -0.76
NPAS3-204ENST00000546849 FMR1Q06787 632 aaKnown RBP eCLIP10.28□□□□□ -0.76
NPAS3-204ENST00000546849 EFCC1Q9HA90 598 aa10.28□□□□□ -0.76
NPAS3-204ENST00000546849 NDFIP2Q9NV92 336 aa10.28□□□□□ -0.76
NPAS3-204ENST00000546849 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.28□□□□□ -0.76
NPAS3-204ENST00000546849 PHF20L1A8MW92 1017 aa10.27□□□□□ -0.77
NPAS3-204ENST00000546849 CPNE3O75131 537 aaKnown RBP10.27□□□□□ -0.77
NPAS3-204ENST00000546849 TNFRSF21O75509 655 aa10.27□□□□□ -0.77
NPAS3-204ENST00000546849 MX2P20592 715 aa10.27□□□□□ -0.77
NPAS3-204ENST00000546849 XKR5Q6UX68 686 aa10.27□□□□□ -0.77
NPAS3-204ENST00000546849 RAB44Q7Z6P3 723 aaPredicted RBP10.27□□□□□ -0.77
NPAS3-204ENST00000546849 COL25A1Q9BXS0 654 aaPredicted RBP10.27□□□□□ -0.77
NPAS3-204ENST00000546849 PSAPP07602 524 aa10.26□□□□□ -0.77
NPAS3-204ENST00000546849 GRNP28799 593 aaKnown RBP10.26□□□□□ -0.77
NPAS3-204ENST00000546849 ITGAEP38570 1179 aa10.26□□□□□ -0.77
NPAS3-204ENST00000546849 ORC1Q13415 861 aa10.26□□□□□ -0.77
NPAS3-204ENST00000546849 DSC3Q14574 896 aa10.26□□□□□ -0.77
NPAS3-204ENST00000546849 FAM182BQ5T319 152 aa10.26□□□□□ -0.77
NPAS3-204ENST00000546849 CSRNP1Q96S65 589 aa10.26□□□□□ -0.77
NPAS3-204ENST00000546849 GSX2Q9BZM3 304 aa10.26□□□□□ -0.77
NPAS3-204ENST00000546849 DNAJC25Q9H1X3 360 aa10.26□□□□□ -0.77
NPAS3-204ENST00000546849 TMEM63CQ9P1W3 806 aa10.26□□□□□ -0.77
NPAS3-204ENST00000546849 FOXD3Q9UJU5 478 aaPredicted RBP10.26□□□□□ -0.77
NPAS3-204ENST00000546849 EIF1AYO14602 144 aaKnown RBP10.25□□□□□ -0.77
NPAS3-204ENST00000546849 CES1P23141 567 aa10.25□□□□□ -0.77
NPAS3-204ENST00000546849 GSK3AP49840 483 aa10.25□□□□□ -0.77
NPAS3-204ENST00000546849 XPCQ01831 940 aaPredicted RBP10.25□□□□□ -0.77
NPAS3-204ENST00000546849 TBC1D8BQ0IIM8 1120 aa10.25□□□□□ -0.77
NPAS3-204ENST00000546849 RNFT1Q5M7Z0 435 aa10.25□□□□□ -0.77
NPAS3-204ENST00000546849 ALG1LQ6GMV1 187 aa10.25□□□□□ -0.77
NPAS3-204ENST00000546849 PMEPA1Q969W9 287 aa10.25□□□□□ -0.77
NPAS3-204ENST00000546849 RBM47A0AV96 593 aaKnown RBP10.24□□□□□ -0.77
NPAS3-204ENST00000546849 TARSP26639 723 aaKnown RBP10.24□□□□□ -0.77
NPAS3-204ENST00000546849 RANGAP1P46060 587 aaPredicted RBP10.24□□□□□ -0.77
NPAS3-204ENST00000546849 KCNMA1Q12791 1236 aa10.24□□□□□ -0.77
NPAS3-204ENST00000546849 SLC30A3Q99726 388 aa10.24□□□□□ -0.77
NPAS3-204ENST00000546849 IGFLR1Q9H665 355 aa10.24□□□□□ -0.77
NPAS3-204ENST00000546849 CTBSQ01459 385 aa10.23□□□□□ -0.77
NPAS3-204ENST00000546849 ENOX2Q16206 610 aaKnown RBP10.23□□□□□ -0.77
NPAS3-204ENST00000546849 MRS2Q9HD23 443 aa10.23□□□□□ -0.77
NPAS3-204ENST00000546849 PRPF40AO75400 957 aaKnown RBP10.22□□□□□ -0.77
NPAS3-204ENST00000546849 IGHA2P01877 340 aa10.22□□□□□ -0.77
NPAS3-204ENST00000546849 ZNF16P17020 682 aaPredicted RBP10.22□□□□□ -0.77
NPAS3-204ENST00000546849 PLAURQ03405 335 aa10.22□□□□□ -0.77
NPAS3-204ENST00000546849 GRIN2CQ14957 1233 aa10.22□□□□□ -0.77
NPAS3-204ENST00000546849 FBXO33Q7Z6M2 555 aa10.22□□□□□ -0.77
NPAS3-204ENST00000546849 NLRP2Q9NX02 1062 aa10.22□□□□□ -0.77
NPAS3-204ENST00000546849 MMP20O60882 483 aa10.21□□□□□ -0.77
NPAS3-204ENST00000546849 MAP2K3P46734 347 aa10.21□□□□□ -0.77
NPAS3-204ENST00000546849 C1orf127Q8N9H9 656 aa10.21□□□□□ -0.77
NPAS3-204ENST00000546849 FBF1Q8TES7 1133 aa10.21□□□□□ -0.77
NPAS3-204ENST00000546849 UBE2OQ9C0C9 1292 aaKnown RBP10.21□□□□□ -0.77
NPAS3-204ENST00000546849 ZFYVE28Q9HCC9 887 aa10.21□□□□□ -0.77
NPAS3-204ENST00000546849 MBIPQ9NS73 344 aa10.21□□□□□ -0.77
NPAS3-204ENST00000546849 ZNF385CQ66K41 422 aaPredicted RBP10.2□□□□□ -0.78
NPAS3-204ENST00000546849 DHX32Q7L7V1 743 aaKnown RBP10.2□□□□□ -0.78
NPAS3-204ENST00000546849 SYT9Q86SS6 491 aa10.2□□□□□ -0.78
NPAS3-204ENST00000546849 NCAPG2Q86XI2 1143 aa10.2□□□□□ -0.78
NPAS3-204ENST00000546849 SPACA7Q96KW9 195 aa10.2□□□□□ -0.78
NPAS3-204ENST00000546849 TLR7Q9NYK1 1049 aaKnown RBP10.2□□□□□ -0.78
NPAS3-204ENST00000546849 KANSL3Q9P2N6 904 aa10.2□□□□□ -0.78
NPAS3-204ENST00000546849 ADAMTS8Q9UP79 889 aa10.2□□□□□ -0.78
NPAS3-204ENST00000546849 E9PSI1 815 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 MAP3K6O95382 1288 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 SLURP2P0DP57 97 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 EDN3P14138 238 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 HYAL2Q12891 473 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 PCSK7Q16549 785 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 ZNF468Q5VIY5 522 aaPredicted RBP10.19□□□□□ -0.78
NPAS3-204ENST00000546849 OR13H1Q8NG92 308 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 ZNF428Q96B54 188 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 DUSP9Q99956 384 aaKnown RBP10.19□□□□□ -0.78
NPAS3-204ENST00000546849 CNTN3Q9P232 1028 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 ZFATQ9P243 1243 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 SPG7Q9UQ90 795 aa10.19□□□□□ -0.78
NPAS3-204ENST00000546849 EREGO14944 169 aa10.18□□□□□ -0.78
NPAS3-204ENST00000546849 GADD45BO75293 160 aaPredicted RBP10.18□□□□□ -0.78
NPAS3-204ENST00000546849 POLR3DP05423 398 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms