RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 HOXC9P31274 260 aa8.78□□□□□ -1
LDHC-209ENST00000545848 RTL5Q5HYW3 569 aaPredicted RBP8.78□□□□□ -1
LDHC-209ENST00000545848 HDGFL2Q7Z4V5 671 aaPredicted RBP8.78□□□□□ -1
LDHC-209ENST00000545848 TCP11L2Q8N4U5 519 aa8.78□□□□□ -1
LDHC-209ENST00000545848 HELBQ8NG08 1087 aaPredicted RBP8.78□□□□□ -1
LDHC-209ENST00000545848 ANKRD24Q8TF21 1146 aa8.78□□□□□ -1
LDHC-209ENST00000545848 LTV1Q96GA3 475 aaPredicted RBP8.78□□□□□ -1
LDHC-209ENST00000545848 POLR3GLQ9BT43 218 aa8.78□□□□□ -1
LDHC-209ENST00000545848 SMG6Q86US8 1419 aaKnown RBP8.78□□□□□ -1
LDHC-209ENST00000545848 WASHC2AQ641Q2 1341 aa8.78□□□□□ -1
LDHC-209ENST00000545848 COL3A1P02461 1466 aaPredicted RBP8.77□□□□□ -1
LDHC-209ENST00000545848 NSD2O96028 1365 aa8.77□□□□□ -1.01
LDHC-209ENST00000545848 TRIM37O94972 964 aa8.77□□□□□ -1.01
LDHC-209ENST00000545848 HSP90AB2PQ58FF8 381 aa8.77□□□□□ -1.01
LDHC-209ENST00000545848 MPNDQ8N594 471 aa8.77□□□□□ -1.01
LDHC-209ENST00000545848 FOXJ1Q92949 421 aa8.77□□□□□ -1.01
LDHC-209ENST00000545848 KDM4CQ9H3R0 1056 aa8.77□□□□□ -1.01
LDHC-209ENST00000545848 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
LDHC-209ENST00000545848 SENP2Q9HC62 589 aa8.77□□□□□ -1.01
LDHC-209ENST00000545848 TERF2IPQ9NYB0 399 aa8.77□□□□□ -1.01
LDHC-209ENST00000545848 LRP5O75197 1615 aa8.76□□□□□ -1.01
LDHC-209ENST00000545848 CCDC7Q96M83 1385 aa8.76□□□□□ -1.01
LDHC-209ENST00000545848 CAPN5O15484 640 aaPredicted RBP8.76□□□□□ -1.01
LDHC-209ENST00000545848 EIF4G2P78344 907 aaKnown RBP eCLIP8.76□□□□□ -1.01
LDHC-209ENST00000545848 EZH2Q15910 746 aaKnown RBP8.76□□□□□ -1.01
LDHC-209ENST00000545848 TOM1L2Q6ZVM7 507 aa8.76□□□□□ -1.01
LDHC-209ENST00000545848 FAM174AQ8TBP5 190 aa8.76□□□□□ -1.01
LDHC-209ENST00000545848 TRIM47Q96LD4 638 aa8.76□□□□□ -1.01
LDHC-209ENST00000545848 PANK3Q9H999 370 aa8.76□□□□□ -1.01
LDHC-209ENST00000545848 OVOS2A0A0G2JMS6 1433 aa8.75□□□□□ -1.01
LDHC-209ENST00000545848 KCNQ2O43526 872 aa8.75□□□□□ -1.01
LDHC-209ENST00000545848 SNRPBP14678 240 aaKnown RBP8.75□□□□□ -1.01
LDHC-209ENST00000545848 EVA1CP58658 441 aa8.75□□□□□ -1.01
LDHC-209ENST00000545848 NBPF6Q5VWK0 638 aa8.75□□□□□ -1.01
LDHC-209ENST00000545848 IP6K1Q92551 441 aa8.75□□□□□ -1.01
LDHC-209ENST00000545848 NBPF4Q96M43 638 aa8.75□□□□□ -1.01
LDHC-209ENST00000545848 SCN11AQ9UI33 1791 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 BMP1P13497 986 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 TNNT2P45379 298 aaPredicted RBP8.74□□□□□ -1.01
LDHC-209ENST00000545848 NNTQ13423 1086 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 AGERQ15109 404 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 TREML4Q6UXN2 200 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 KCNH5Q8NCM2 988 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 CARD10Q9BWT7 1032 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 PDGFDQ9GZP0 370 aaPredicted RBP8.74□□□□□ -1.01
LDHC-209ENST00000545848 C5P01031 1676 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 COL24A1Q17RW2 1714 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 QSER1Q2KHR3 1735 aa8.74□□□□□ -1.01
LDHC-209ENST00000545848 RTL1A6NKG5 1358 aa8.73□□□□□ -1.01
LDHC-209ENST00000545848 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
LDHC-209ENST00000545848 BPHLQ86WA6 291 aaPredicted RBP8.73□□□□□ -1.01
LDHC-209ENST00000545848 ARMC2Q8NEN0 867 aa8.73□□□□□ -1.01
LDHC-209ENST00000545848 KIFC2Q96AC6 838 aa8.73□□□□□ -1.01
LDHC-209ENST00000545848 DDRGK1Q96HY6 314 aa8.73□□□□□ -1.01
LDHC-209ENST00000545848 COG3Q96JB2 828 aa8.73□□□□□ -1.01
LDHC-209ENST00000545848 CAMKK2Q96RR4 588 aa8.73□□□□□ -1.01
LDHC-209ENST00000545848 NLRP2Q9NX02 1062 aa8.73□□□□□ -1.01
LDHC-209ENST00000545848 DLG5Q8TDM6 1919 aa8.72□□□□□ -1.01
LDHC-209ENST00000545848 SIPA1L3O60292 1781 aaPredicted RBP8.72□□□□□ -1.01
LDHC-209ENST00000545848 ADH1CP00326 375 aa8.72□□□□□ -1.01
LDHC-209ENST00000545848 SKIV2LQ15477 1246 aaKnown RBP8.72□□□□□ -1.01
LDHC-209ENST00000545848 SH3D19Q5HYK7 790 aa8.72□□□□□ -1.01
LDHC-209ENST00000545848 LCE2AQ5TA79 106 aaPredicted RBP8.72□□□□□ -1.01
LDHC-209ENST00000545848 ACSBG1Q96GR2 724 aa8.72□□□□□ -1.01
LDHC-209ENST00000545848 POLKQ9UBT6 870 aa8.72□□□□□ -1.01
LDHC-209ENST00000545848 INSRP06213 1382 aa8.72□□□□□ -1.01
LDHC-209ENST00000545848 FLT4P35916 1363 aa8.72□□□□□ -1.01
LDHC-209ENST00000545848 ADAMTS7Q9UKP4 1686 aa8.72□□□□□ -1.01
LDHC-209ENST00000545848 COL5A3P25940 1745 aaPredicted RBP8.71□□□□□ -1.01
LDHC-209ENST00000545848 TJP1Q07157 1748 aa8.71□□□□□ -1.01
LDHC-209ENST00000545848 UBR3Q6ZT12 1888 aa8.71□□□□□ -1.01
LDHC-209ENST00000545848 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.02
LDHC-209ENST00000545848 KCNQ4P56696 695 aa8.71□□□□□ -1.02
LDHC-209ENST00000545848 CTDSPL2Q05D32 466 aa8.71□□□□□ -1.02
LDHC-209ENST00000545848 ARID5BQ14865 1188 aa8.71□□□□□ -1.02
LDHC-209ENST00000545848 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
LDHC-209ENST00000545848 TRIM46Q7Z4K8 759 aa8.71□□□□□ -1.02
LDHC-209ENST00000545848 CDK15Q96Q40 435 aa8.71□□□□□ -1.02
LDHC-209ENST00000545848 THRAP3Q9Y2W1 955 aaKnown RBP8.71□□□□□ -1.02
LDHC-209ENST00000545848 BCL9O00512 1426 aa8.71□□□□□ -1.02
LDHC-209ENST00000545848 DDB1Q16531 1140 aa8.7□□□□□ -1.02
LDHC-209ENST00000545848 AEBP1Q8IUX7 1158 aa8.7□□□□□ -1.02
LDHC-209ENST00000545848 MYH14Q7Z406 1995 aaKnown RBP8.7□□□□□ -1.02
LDHC-209ENST00000545848 C4AP0C0L4 1744 aa8.69□□□□□ -1.02
LDHC-209ENST00000545848 C4BP0C0L5 1744 aa8.69□□□□□ -1.02
LDHC-209ENST00000545848 WFS1O76024 890 aa8.69□□□□□ -1.02
LDHC-209ENST00000545848 WDR4P57081 412 aaKnown RBP8.69□□□□□ -1.02
LDHC-209ENST00000545848 CNGB1Q14028 1251 aaPredicted RBP8.69□□□□□ -1.02
LDHC-209ENST00000545848 EIF4A2Q14240 407 aaKnown RBP8.69□□□□□ -1.02
LDHC-209ENST00000545848 SH3RF1Q7Z6J0 888 aa8.69□□□□□ -1.02
LDHC-209ENST00000545848 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
LDHC-209ENST00000545848 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
LDHC-209ENST00000545848 KDM6AO15550 1401 aaPredicted RBP8.69□□□□□ -1.02
LDHC-209ENST00000545848 CYP27B1O15528 508 aa8.68□□□□□ -1.02
LDHC-209ENST00000545848 IL2RBP14784 551 aa8.68□□□□□ -1.02
LDHC-209ENST00000545848 TIMP2P16035 220 aa8.68□□□□□ -1.02
LDHC-209ENST00000545848 AMPHP49418 695 aa8.68□□□□□ -1.02
LDHC-209ENST00000545848 NFX1Q12986 1120 aaKnown RBP8.68□□□□□ -1.02
LDHC-209ENST00000545848 CGNL1Q0VF96 1302 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms