RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ICMTO60725 284 aa8.81□□□□□ -1
CPSF7-222ENST00000544585 PDE3BQ13370 1112 aa8.81□□□□□ -1
CPSF7-222ENST00000544585 PRAM1Q96QH2 718 aa8.81□□□□□ -1
CPSF7-222ENST00000544585 MPHOSPH9Q99550 1183 aa8.81□□□□□ -1
CPSF7-222ENST00000544585 SPON1Q9HCB6 807 aa8.81□□□□□ -1
CPSF7-222ENST00000544585 ANO2Q9NQ90 1003 aa8.81□□□□□ -1
CPSF7-222ENST00000544585 PRDM11Q9NQV5 511 aa8.81□□□□□ -1
CPSF7-222ENST00000544585 KIAA1522Q9P206 1035 aaPredicted RBP8.81□□□□□ -1
CPSF7-222ENST00000544585 DISP2A7MBM2 1401 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 USP32Q8NFA0 1604 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 KCNQ2O43526 872 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 EVA1CP58658 441 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 SAFB2Q14151 953 aaKnown RBP eCLIP8.8□□□□□ -1
CPSF7-222ENST00000544585 LINC01559Q495D7 138 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 ZNF511Q8NB15 262 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 NGDNQ8NEJ9 315 aaKnown RBP8.8□□□□□ -1
CPSF7-222ENST00000544585 FOXJ1Q92949 421 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 USP35Q9P2H5 1018 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 PPP1R1BQ9UD71 204 aaPredicted RBP8.8□□□□□ -1
CPSF7-222ENST00000544585 CDV3Q9UKY7 258 aaKnown RBP8.8□□□□□ -1
CPSF7-222ENST00000544585 NRXN1Q9ULB1 1477 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 SPATA31A1Q5TZJ5 1347 aa8.8□□□□□ -1
CPSF7-222ENST00000544585 KIF1AQ12756 1690 aa8.79□□□□□ -1
CPSF7-222ENST00000544585 MAPK1P28482 360 aa8.79□□□□□ -1
CPSF7-222ENST00000544585 NPAS4Q8IUM7 802 aa8.79□□□□□ -1
CPSF7-222ENST00000544585 GTF3C2Q8WUA4 911 aaPredicted RBP8.79□□□□□ -1
CPSF7-222ENST00000544585 IGSF5Q9NSI5 407 aa8.79□□□□□ -1
CPSF7-222ENST00000544585 NWD2Q9ULI1 1742 aa8.79□□□□□ -1
CPSF7-222ENST00000544585 C21orf2O43822 256 aa8.78□□□□□ -1
CPSF7-222ENST00000544585 LGR5O75473 907 aa8.78□□□□□ -1
CPSF7-222ENST00000544585 MYCP01106 439 aaPredicted RBP8.78□□□□□ -1
CPSF7-222ENST00000544585 THSD4Q6ZMP0 1018 aa8.78□□□□□ -1
CPSF7-222ENST00000544585 FAM163AQ96GL9 167 aaPredicted RBP8.78□□□□□ -1
CPSF7-222ENST00000544585 MTRQ99707 1265 aa8.78□□□□□ -1
CPSF7-222ENST00000544585 MKNK1Q9BUB5 465 aa8.78□□□□□ -1
CPSF7-222ENST00000544585 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
CPSF7-222ENST00000544585 SPATA31E1Q6ZUB1 1445 aa8.78□□□□□ -1
CPSF7-222ENST00000544585 ANKARQ7Z5J8 1434 aa8.78□□□□□ -1
CPSF7-222ENST00000544585 EIF3AQ14152 1382 aaKnown RBP8.77□□□□□ -1.01
CPSF7-222ENST00000544585 PPLO60437 1756 aa8.77□□□□□ -1.01
CPSF7-222ENST00000544585 ESPNB1AK53 854 aa8.77□□□□□ -1.01
CPSF7-222ENST00000544585 WASLO00401 505 aaPredicted RBP8.77□□□□□ -1.01
CPSF7-222ENST00000544585 PTCD1O75127 700 aaKnown RBP8.77□□□□□ -1.01
CPSF7-222ENST00000544585 FKBP4Q02790 459 aaKnown RBP eCLIP8.77□□□□□ -1.01
CPSF7-222ENST00000544585 ZSCAN29Q8IWY8 852 aaPredicted RBP8.77□□□□□ -1.01
CPSF7-222ENST00000544585 BCL11AQ9H165 835 aa8.77□□□□□ -1.01
CPSF7-222ENST00000544585 STRN4Q9NRL3 753 aa8.77□□□□□ -1.01
CPSF7-222ENST00000544585 PIK3C2GO75747 1445 aa8.77□□□□□ -1.01
CPSF7-222ENST00000544585 M0R2N6 131 aa8.76□□□□□ -1.01
CPSF7-222ENST00000544585 PLSCR1O15162 318 aa8.76□□□□□ -1.01
CPSF7-222ENST00000544585 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
CPSF7-222ENST00000544585 TSEN2Q8NCE0 465 aaKnown RBP8.76□□□□□ -1.01
CPSF7-222ENST00000544585 SEPT3Q9UH03 358 aa8.76□□□□□ -1.01
CPSF7-222ENST00000544585 DCTN4Q9UJW0 460 aa8.76□□□□□ -1.01
CPSF7-222ENST00000544585 TRAK1Q9UPV9 953 aa8.76□□□□□ -1.01
CPSF7-222ENST00000544585 THRAP3Q9Y2W1 955 aaKnown RBP8.76□□□□□ -1.01
CPSF7-222ENST00000544585 FMN2Q9NZ56 1722 aa8.75□□□□□ -1.01
CPSF7-222ENST00000544585 WEE1P30291 646 aa8.75□□□□□ -1.01
CPSF7-222ENST00000544585 RAB15P59190 212 aa8.75□□□□□ -1.01
CPSF7-222ENST00000544585 ZC3H6P61129 1189 aaKnown RBP8.75□□□□□ -1.01
CPSF7-222ENST00000544585 CHRNA2Q15822 529 aa8.75□□□□□ -1.01
CPSF7-222ENST00000544585 TCP11L2Q8N4U5 519 aa8.75□□□□□ -1.01
CPSF7-222ENST00000544585 HIRIP3Q9BW71 556 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-222ENST00000544585 C1QTNF2Q9BXJ5 285 aa8.75□□□□□ -1.01
CPSF7-222ENST00000544585 IL21Q9HBE4 155 aa8.75□□□□□ -1.01
CPSF7-222ENST00000544585 TCF3P15923 654 aa8.74□□□□□ -1.01
CPSF7-222ENST00000544585 LHX8Q68G74 356 aa8.74□□□□□ -1.01
CPSF7-222ENST00000544585 TRMT44Q8IYL2 757 aaKnown RBP8.74□□□□□ -1.01
CPSF7-222ENST00000544585 ASB16Q96NS5 453 aa8.74□□□□□ -1.01
CPSF7-222ENST00000544585 FCF1Q9Y324 198 aaKnown RBP8.74□□□□□ -1.01
CPSF7-222ENST00000544585 DNMT3AQ9Y6K1 912 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-222ENST00000544585 KIAA0232Q92628 1395 aa8.73□□□□□ -1.01
CPSF7-222ENST00000544585 NINLQ9Y2I6 1382 aa8.73□□□□□ -1.01
CPSF7-222ENST00000544585 FKBP5Q13451 457 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-222ENST00000544585 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.73□□□□□ -1.01
CPSF7-222ENST00000544585 KCTD12Q96CX2 325 aaKnown RBP8.73□□□□□ -1.01
CPSF7-222ENST00000544585 NUDT16Q96DE0 195 aaKnown RBP8.73□□□□□ -1.01
CPSF7-222ENST00000544585 KCTD15Q96SI1 283 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-222ENST00000544585 RGPD1P0DJD0 1748 aa8.73□□□□□ -1.01
CPSF7-222ENST00000544585 PRR36Q9H6K5 1346 aa8.73□□□□□ -1.01
CPSF7-222ENST00000544585 PLCH1Q4KWH8 1693 aa8.72□□□□□ -1.01
CPSF7-222ENST00000544585 COL14A1Q05707 1796 aaKnown RBP8.72□□□□□ -1.01
CPSF7-222ENST00000544585 S1PR4O95977 384 aa8.72□□□□□ -1.01
CPSF7-222ENST00000544585 MTMR3Q13615 1198 aa8.72□□□□□ -1.01
CPSF7-222ENST00000544585 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
CPSF7-222ENST00000544585 COL26A1Q96A83 441 aa8.72□□□□□ -1.01
CPSF7-222ENST00000544585 KNDC1Q76NI1 1749 aa8.71□□□□□ -1.01
CPSF7-222ENST00000544585 SENP3-EIF4A1A0A087X0R7 540 aa8.71□□□□□ -1.02
CPSF7-222ENST00000544585 SH3BP2P78314 561 aa8.71□□□□□ -1.02
CPSF7-222ENST00000544585 TJAP1Q5JTD0 557 aa8.71□□□□□ -1.02
CPSF7-222ENST00000544585 NLRP13Q86W25 1043 aa8.71□□□□□ -1.02
CPSF7-222ENST00000544585 ABTB2Q8N961 1025 aa8.71□□□□□ -1.02
CPSF7-222ENST00000544585 ZNF358Q9NW07 568 aa8.71□□□□□ -1.02
CPSF7-222ENST00000544585 RGPD8O14715 1765 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-222ENST00000544585 DLC1Q96QB1 1528 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 IGFBP4P22692 258 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 VAMP1P23763 118 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 ARHGAP4P98171 946 aa8.7□□□□□ -1.02
CPSF7-222ENST00000544585 NAA30Q147X3 362 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms