RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 GFRA3O60609 400 aa10.25□□□□□ -0.77
SMCO2-206ENST00000543991 XYLBO75191 536 aa10.25□□□□□ -0.77
SMCO2-206ENST00000543991 EGFRP00533 1210 aa10.25□□□□□ -0.77
SMCO2-206ENST00000543991 LBRQ14739 615 aaKnown RBP10.25□□□□□ -0.77
SMCO2-206ENST00000543991 EFHC2Q5JST6 749 aa10.25□□□□□ -0.77
SMCO2-206ENST00000543991 BRD7Q9NPI1 651 aa10.25□□□□□ -0.77
SMCO2-206ENST00000543991 SPG7Q9UQ90 795 aa10.25□□□□□ -0.77
SMCO2-206ENST00000543991 AK5Q9Y6K8 562 aa10.25□□□□□ -0.77
SMCO2-206ENST00000543991 MAN1A2O60476 641 aa10.24□□□□□ -0.77
SMCO2-206ENST00000543991 IGSF3O75054 1194 aa10.24□□□□□ -0.77
SMCO2-206ENST00000543991 PHACTR2O75167 634 aa10.24□□□□□ -0.77
SMCO2-206ENST00000543991 CCDC74AQ96AQ1 378 aa10.24□□□□□ -0.77
SMCO2-206ENST00000543991 TMEM63CQ9P1W3 806 aa10.24□□□□□ -0.77
SMCO2-206ENST00000543991 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
SMCO2-206ENST00000543991 SENP3-EIF4A1A0A087X0R7 540 aa10.23□□□□□ -0.77
SMCO2-206ENST00000543991 USPL1Q5W0Q7 1092 aa10.23□□□□□ -0.77
SMCO2-206ENST00000543991 ZCCHC2Q9C0B9 1178 aaKnown RBP10.23□□□□□ -0.77
SMCO2-206ENST00000543991 KCNQ4P56696 695 aa10.22□□□□□ -0.77
SMCO2-206ENST00000543991 HDLBPQ00341 1268 aaKnown RBP10.22□□□□□ -0.77
SMCO2-206ENST00000543991 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMCO2-206ENST00000543991 FIGNL1Q6PIW4 674 aa10.22□□□□□ -0.77
SMCO2-206ENST00000543991 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
SMCO2-206ENST00000543991 C8orf37Q96NL8 207 aa10.22□□□□□ -0.77
SMCO2-206ENST00000543991 ATP13A2Q9NQ11 1180 aa10.22□□□□□ -0.77
SMCO2-206ENST00000543991 GIPC1O14908 333 aa10.21□□□□□ -0.77
SMCO2-206ENST00000543991 METTL5Q9NRN9 209 aaKnown RBP10.21□□□□□ -0.77
SMCO2-206ENST00000543991 NLRP2Q9NX02 1062 aa10.21□□□□□ -0.77
SMCO2-206ENST00000543991 ABI2Q9NYB9 513 aaPredicted RBP10.21□□□□□ -0.77
SMCO2-206ENST00000543991 KCNH4Q9UQ05 1017 aa10.21□□□□□ -0.77
SMCO2-206ENST00000543991 ATXN7O15265 892 aaPredicted RBP10.2□□□□□ -0.78
SMCO2-206ENST00000543991 FAM157BP0CG42 384 aa10.2□□□□□ -0.78
SMCO2-206ENST00000543991 EIF4BP23588 611 aaKnown RBP10.2□□□□□ -0.78
SMCO2-206ENST00000543991 RIPOR1Q6ZS17 1223 aa10.2□□□□□ -0.78
SMCO2-206ENST00000543991 EPS8L3Q8TE67 593 aaKnown RBP10.2□□□□□ -0.78
SMCO2-206ENST00000543991 PMEPA1Q969W9 287 aa10.2□□□□□ -0.78
SMCO2-206ENST00000543991 CEP164Q9UPV0 1460 aa10.2□□□□□ -0.78
SMCO2-206ENST00000543991 ERCC5P28715 1186 aaPredicted RBP10.19□□□□□ -0.78
SMCO2-206ENST00000543991 ZC3H6P61129 1189 aaKnown RBP10.19□□□□□ -0.78
SMCO2-206ENST00000543991 TTC39BQ5VTQ0 682 aaPredicted RBP10.19□□□□□ -0.78
SMCO2-206ENST00000543991 C1orf127Q8N9H9 656 aa10.19□□□□□ -0.78
SMCO2-206ENST00000543991 CRELD1Q96HD1 420 aa10.19□□□□□ -0.78
SMCO2-206ENST00000543991 CHRDQ9H2X0 955 aa10.19□□□□□ -0.78
SMCO2-206ENST00000543991 AAASQ9NRG9 546 aa10.19□□□□□ -0.78
SMCO2-206ENST00000543991 CNTN3Q9P232 1028 aa10.19□□□□□ -0.78
SMCO2-206ENST00000543991 PCDHGC4Q9Y5F7 938 aa10.19□□□□□ -0.78
SMCO2-206ENST00000543991 ARAP1Q96P48 1450 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 EFSO43281 561 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 IRS1P35568 1242 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 FANCCQ00597 558 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 PTSQ03393 145 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 LAPTM4AQ15012 233 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 C9orf131Q5VYM1 1079 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 PI16Q6UXB8 463 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 GALNT12Q8IXK2 581 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 RNF34Q969K3 372 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 C12orf49Q9H741 205 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 PEG3Q9GZU2 1588 aa10.18□□□□□ -0.78
SMCO2-206ENST00000543991 SLC35F4A4IF30 521 aa10.17□□□□□ -0.78
SMCO2-206ENST00000543991 H7C1W4 665 aa10.17□□□□□ -0.78
SMCO2-206ENST00000543991 EREGO14944 169 aa10.17□□□□□ -0.78
SMCO2-206ENST00000543991 ST8SIA5O15466 376 aa10.17□□□□□ -0.78
SMCO2-206ENST00000543991 POLR3DP05423 398 aaPredicted RBP10.17□□□□□ -0.78
SMCO2-206ENST00000543991 THBS1P07996 1170 aa10.17□□□□□ -0.78
SMCO2-206ENST00000543991 CTSHP09668 335 aa10.17□□□□□ -0.78
SMCO2-206ENST00000543991 SFSWAPQ12872 951 aaKnown RBP10.17□□□□□ -0.78
SMCO2-206ENST00000543991 LAMC2Q13753 1193 aa10.17□□□□□ -0.78
SMCO2-206ENST00000543991 CCINQ13939 588 aa10.17□□□□□ -0.78
SMCO2-206ENST00000543991 METTL16Q86W50 562 aaKnown RBP10.17□□□□□ -0.78
SMCO2-206ENST00000543991 OSBPL7Q9BZF2 842 aa10.17□□□□□ -0.78
SMCO2-206ENST00000543991 NUCKS1Q9H1E3 243 aaKnown RBP10.17□□□□□ -0.78
SMCO2-206ENST00000543991 SOBPA7XYQ1 873 aa10.16□□□□□ -0.78
SMCO2-206ENST00000543991 SASH3O75995 380 aa10.16□□□□□ -0.78
SMCO2-206ENST00000543991 CES1P23141 567 aa10.16□□□□□ -0.78
SMCO2-206ENST00000543991 ZNF76P36508 570 aa10.16□□□□□ -0.78
SMCO2-206ENST00000543991 TNP2Q05952 138 aa10.16□□□□□ -0.78
SMCO2-206ENST00000543991 UBAP2LQ14157 1087 aaKnown RBP10.16□□□□□ -0.78
SMCO2-206ENST00000543991 GSX2Q9BZM3 304 aa10.16□□□□□ -0.78
SMCO2-206ENST00000543991 NPHS2Q9NP85 383 aa10.16□□□□□ -0.78
SMCO2-206ENST00000543991 USP35Q9P2H5 1018 aa10.16□□□□□ -0.78
SMCO2-206ENST00000543991 KHNYNO15037 678 aaKnown RBP10.15□□□□□ -0.78
SMCO2-206ENST00000543991 NT5DC4Q86YG4 428 aa10.15□□□□□ -0.78
SMCO2-206ENST00000543991 SRCIN1Q9C0H9 1055 aa10.15□□□□□ -0.78
SMCO2-206ENST00000543991 DCDC2BA2VCK2 349 aa10.14□□□□□ -0.79
SMCO2-206ENST00000543991 TRIM22Q8IYM9 498 aa10.14□□□□□ -0.79
SMCO2-206ENST00000543991 DACH1Q9UI36 760 aa10.14□□□□□ -0.79
SMCO2-206ENST00000543991 GADD45BO75293 160 aaPredicted RBP10.13□□□□□ -0.79
SMCO2-206ENST00000543991 MAPTP10636 758 aaKnown RBP10.13□□□□□ -0.79
SMCO2-206ENST00000543991 TARSP26639 723 aaKnown RBP10.13□□□□□ -0.79
SMCO2-206ENST00000543991 VEGFBP49765 207 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 RAD51AP2Q09MP3 1159 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 DBN1Q16643 649 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 KRT25Q7Z3Z0 450 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 CCDC155Q8N6L0 562 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 KIFC2Q96AC6 838 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 GMCL1Q96IK5 515 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 SENP2Q9HC62 589 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 NDFIP2Q9NV92 336 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 FAM8A1Q9UBU6 413 aa10.13□□□□□ -0.79
SMCO2-206ENST00000543991 FANCD2Q9BXW9 1451 aa10.12□□□□□ -0.79
SMCO2-206ENST00000543991 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms