RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 KCNJ4P48050 445 aa24.73■■□□□ 1.55
ME3-212ENST00000543262 ZBTB38Q8NAP3 1195 aaPredicted RBP24.72■■□□□ 1.55
ME3-212ENST00000543262 JAKMIP1Q96N16 626 aaKnown RBP24.72■■□□□ 1.55
ME3-212ENST00000543262 PUS3Q9BZE2 481 aaKnown RBP24.72■■□□□ 1.55
ME3-212ENST00000543262 ZBTB1Q9Y2K1 713 aa24.72■■□□□ 1.55
ME3-212ENST00000543262 CCDC57Q2TAC2 916 aa24.72■■□□□ 1.55
ME3-212ENST00000543262 CREB3L3Q68CJ9 461 aa24.72■■□□□ 1.55
ME3-212ENST00000543262 MCTP1Q6DN14 999 aa24.72■■□□□ 1.55
ME3-212ENST00000543262 ZKSCAN1P17029 563 aaPredicted RBP24.71■■□□□ 1.55
ME3-212ENST00000543262 RUFY3Q7L099 469 aa24.71■■□□□ 1.55
ME3-212ENST00000543262 ZNF589Q86UQ0 364 aaPredicted RBP24.71■■□□□ 1.55
ME3-212ENST00000543262 TM6SF1Q9BZW5 370 aa24.71■■□□□ 1.55
ME3-212ENST00000543262 DDB1Q16531 1140 aa24.7■■□□□ 1.55
ME3-212ENST00000543262 ZSWIM6Q9HCJ5 1215 aa24.7■■□□□ 1.55
ME3-212ENST00000543262 LIMCH1Q9UPQ0 1083 aa24.7■■□□□ 1.55
ME3-212ENST00000543262 THRAP3Q9Y2W1 955 aaKnown RBP24.7■■□□□ 1.55
ME3-212ENST00000543262 NUTM2BA6NNL0 878 aaPredicted RBP24.7■■□□□ 1.54
ME3-212ENST00000543262 NUTM2EB1AL46 878 aaPredicted RBP24.7■■□□□ 1.54
ME3-212ENST00000543262 GPTP24298 496 aa24.7■■□□□ 1.54
ME3-212ENST00000543262 NUTM2AQ8IVF1 878 aaPredicted RBP24.7■■□□□ 1.54
ME3-212ENST00000543262 LARP6Q9BRS8 491 aaKnown RBP24.7■■□□□ 1.54
ME3-212ENST00000543262 PLA2G12BQ9BX93 195 aa24.7■■□□□ 1.54
ME3-212ENST00000543262 DDX46Q7L014 1031 aaKnown RBP24.69■■□□□ 1.54
ME3-212ENST00000543262 NLRP10Q86W26 655 aa24.69■■□□□ 1.54
ME3-212ENST00000543262 SYNE4Q8N205 404 aa24.69■■□□□ 1.54
ME3-212ENST00000543262 CCDC85AQ96PX6 553 aaPredicted RBP24.69■■□□□ 1.54
ME3-212ENST00000543262 CYP46A1Q9Y6A2 500 aa24.69■■□□□ 1.54
ME3-212ENST00000543262 SLC27A2O14975 620 aa24.68■■□□□ 1.54
ME3-212ENST00000543262 PDRG1Q9NUG6 133 aa24.68■■□□□ 1.54
ME3-212ENST00000543262 ZNF609O15014 1411 aa24.68■■□□□ 1.54
ME3-212ENST00000543262 RFX7Q2KHR2 1363 aa24.68■■□□□ 1.54
ME3-212ENST00000543262 CSF1RP07333 972 aa24.68■■□□□ 1.54
ME3-212ENST00000543262 HSP90AB3PQ58FF7 597 aa24.68■■□□□ 1.54
ME3-212ENST00000543262 VPS53Q5VIR6 699 aa24.68■■□□□ 1.54
ME3-212ENST00000543262 FOXD4L5Q5VV16 416 aaPredicted RBP24.68■■□□□ 1.54
ME3-212ENST00000543262 FOXD4L4Q8WXT5 416 aaPredicted RBP24.68■■□□□ 1.54
ME3-212ENST00000543262 A0A1B0GUL7 405 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 FSD2A1L4K1 749 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 TAF5LO75529 589 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 BRD1O95696 1058 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 CHGBP05060 677 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 ANKRD36CQ5JPF3 1778 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 NUP98P52948 1817 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 JCADQ9P266 1359 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 GOLGA6L3A6NEY3 463 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 L1TD1Q5T7N2 865 aaKnown RBP24.67■■□□□ 1.54
ME3-212ENST00000543262 CEP126Q9P2H0 1117 aa24.67■■□□□ 1.54
ME3-212ENST00000543262 KBTBD3Q8NAB2 608 aa24.66■■□□□ 1.54
ME3-212ENST00000543262 BRPF3Q9ULD4 1205 aa24.66■■□□□ 1.54
ME3-212ENST00000543262 A0A0G2JS52 829 aa24.66■■□□□ 1.54
ME3-212ENST00000543262 IL6STP40189 918 aaPredicted RBP24.66■■□□□ 1.54
ME3-212ENST00000543262 PIP4K2BP78356 416 aa24.66■■□□□ 1.54
ME3-212ENST00000543262 CDHR2Q9BYE9 1310 aa24.65■■□□□ 1.54
ME3-212ENST00000543262 IFIT5Q13325 482 aaKnown RBP24.65■■□□□ 1.54
ME3-212ENST00000543262 RNF20Q5VTR2 975 aa24.65■■□□□ 1.54
ME3-212ENST00000543262 MARCH10Q8NA82 808 aaPredicted RBP24.65■■□□□ 1.54
ME3-212ENST00000543262 ACSBG1Q96GR2 724 aa24.65■■□□□ 1.54
ME3-212ENST00000543262 LMBRD1Q9NUN5 540 aa24.65■■□□□ 1.54
ME3-212ENST00000543262 PAG1Q9NWQ8 432 aa24.65■■□□□ 1.54
ME3-212ENST00000543262 FBXO3Q9UK99 471 aa24.65■■□□□ 1.54
ME3-212ENST00000543262 TBC1D2BQ9UPU7 963 aa24.65■■□□□ 1.54
ME3-212ENST00000543262 SPATA31A5Q5VU36 1347 aa24.65■■□□□ 1.54
ME3-212ENST00000543262 SPATA31A7Q8IWB4 1347 aa24.65■■□□□ 1.54
ME3-212ENST00000543262 GOLIM4O00461 696 aa24.64■■□□□ 1.54
ME3-212ENST00000543262 SEC62Q99442 399 aaKnown RBP24.64■■□□□ 1.54
ME3-212ENST00000543262 DDX49Q9Y6V7 483 aaKnown RBP24.64■■□□□ 1.54
ME3-212ENST00000543262 DZIP3Q86Y13 1208 aaKnown RBP24.64■■□□□ 1.53
ME3-212ENST00000543262 CHAMP1Q96JM3 812 aa24.64■■□□□ 1.53
ME3-212ENST00000543262 RPAP1Q9BWH6 1393 aaPredicted RBP24.64■■□□□ 1.53
ME3-212ENST00000543262 KLHL40Q2TBA0 621 aa24.63■■□□□ 1.53
ME3-212ENST00000543262 TAF7LQ5H9L4 462 aa24.63■■□□□ 1.53
ME3-212ENST00000543262 ERVV-1B6SEH8 477 aa24.63■■□□□ 1.53
ME3-212ENST00000543262 MCMDC2Q4G0Z9 681 aa24.63■■□□□ 1.53
ME3-212ENST00000543262 CCDC129Q6ZRS4 1044 aa24.63■■□□□ 1.53
ME3-212ENST00000543262 TAF6LQ9Y6J9 622 aa24.63■■□□□ 1.53
ME3-212ENST00000543262 LARGE1O95461 756 aa24.62■■□□□ 1.53
ME3-212ENST00000543262 PSMA5P28066 241 aa24.62■■□□□ 1.53
ME3-212ENST00000543262 TTLL11Q8NHH1 800 aa24.62■■□□□ 1.53
ME3-212ENST00000543262 IFIT1P09914 478 aaKnown RBP24.62■■□□□ 1.53
ME3-212ENST00000543262 USPL1Q5W0Q7 1092 aa24.62■■□□□ 1.53
ME3-212ENST00000543262 TRMT112Q9UI30 125 aaKnown RBP24.62■■□□□ 1.53
ME3-212ENST00000543262 PALLDQ8WX93 1383 aa24.62■■□□□ 1.53
ME3-212ENST00000543262 COL9A3Q14050 684 aaPredicted RBP24.61■■□□□ 1.53
ME3-212ENST00000543262 HMG20BQ9P0W2 317 aa24.61■■□□□ 1.53
ME3-212ENST00000543262 AKAP2Q9Y2D5 859 aa24.61■■□□□ 1.53
ME3-212ENST00000543262 MYH3P11055 1940 aa24.61■■□□□ 1.53
ME3-212ENST00000543262 PRPF40AO75400 957 aaKnown RBP24.61■■□□□ 1.53
ME3-212ENST00000543262 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.61■■□□□ 1.53
ME3-212ENST00000543262 NWD2Q9ULI1 1742 aa24.6■■□□□ 1.53
ME3-212ENST00000543262 IRS4O14654 1257 aaPredicted RBP24.6■■□□□ 1.53
ME3-212ENST00000543262 TSGA10IPQ3SY00 556 aa24.6■■□□□ 1.53
ME3-212ENST00000543262 ZSCAN31Q96LW9 406 aaPredicted RBP24.6■■□□□ 1.53
ME3-212ENST00000543262 GREM2Q9H772 168 aa24.6■■□□□ 1.53
ME3-212ENST00000543262 TOM1O60784 492 aa24.6■■□□□ 1.53
ME3-212ENST00000543262 ATP6V1AP38606 617 aa24.6■■□□□ 1.53
ME3-212ENST00000543262 CTSWP56202 376 aa24.6■■□□□ 1.53
ME3-212ENST00000543262 INTS5Q6P9B9 1019 aaKnown RBP24.6■■□□□ 1.53
ME3-212ENST00000543262 SH3TC1Q8TE82 1336 aa24.59■■□□□ 1.53
ME3-212ENST00000543262 ITGA6P23229 1130 aa24.59■■□□□ 1.53
ME3-212ENST00000543262 ADORA1P30542 326 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms