RNA–Protein interactions for RNA: ENST00000543054.5

TSG101-207, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-207ENST00000543054 RNF34Q969K3 372 aa7.28□□□□□ -1.24
TSG101-207ENST00000543054 KRTAP4-6Q9BYQ5 205 aa7.28□□□□□ -1.24
TSG101-207ENST00000543054 AK5Q9Y6K8 562 aa7.28□□□□□ -1.24
TSG101-207ENST00000543054 SPATA31C2B4DYI2 1134 aa7.27□□□□□ -1.25
TSG101-207ENST00000543054 PHKA2P46019 1235 aa7.27□□□□□ -1.25
TSG101-207ENST00000543054 CCDC155Q8N6L0 562 aa7.27□□□□□ -1.25
TSG101-207ENST00000543054 UBXN4Q92575 508 aa7.27□□□□□ -1.25
TSG101-207ENST00000543054 TGIF2Q9GZN2 237 aa7.27□□□□□ -1.25
TSG101-207ENST00000543054 DNAJC25Q9H1X3 360 aa7.27□□□□□ -1.25
TSG101-207ENST00000543054 ACBD3Q9H3P7 528 aa7.27□□□□□ -1.25
TSG101-207ENST00000543054 SLC35F4A4IF30 521 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 FIGNL2A6NMB9 653 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 TNFRSF21O75509 655 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 PCSK2P16519 638 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 INPP5BP32019 993 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 TNNI2P48788 182 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 SF3A1Q15459 793 aaKnown RBP7.26□□□□□ -1.25
TSG101-207ENST00000543054 NBPF1Q3BBV0 1214 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 CNTNAP3BQ96NU0 1288 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 COL25A1Q9BXS0 654 aaPredicted RBP7.26□□□□□ -1.25
TSG101-207ENST00000543054 CNTNAP3Q9BZ76 1288 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 OSBPL7Q9BZF2 842 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 KCNMB2Q9Y691 235 aa7.26□□□□□ -1.25
TSG101-207ENST00000543054 ABCC8Q09428 1581 aa7.25□□□□□ -1.25
TSG101-207ENST00000543054 CPNE3O75131 537 aaKnown RBP7.25□□□□□ -1.25
TSG101-207ENST00000543054 GTF2E1P29083 439 aaPredicted RBP7.25□□□□□ -1.25
TSG101-207ENST00000543054 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.25□□□□□ -1.25
TSG101-207ENST00000543054 RNF217Q8TC41 542 aa7.25□□□□□ -1.25
TSG101-207ENST00000543054 EPS8L3Q8TE67 593 aaKnown RBP7.25□□□□□ -1.25
TSG101-207ENST00000543054 AIDAQ96BJ3 306 aa7.25□□□□□ -1.25
TSG101-207ENST00000543054 RNF225M0QZC1 329 aaPredicted RBP7.24□□□□□ -1.25
TSG101-207ENST00000543054 ITGAEP38570 1179 aa7.24□□□□□ -1.25
TSG101-207ENST00000543054 ZNF394Q53GI3 561 aa7.24□□□□□ -1.25
TSG101-207ENST00000543054 NBPF10Q6P3W6 841 aaKnown RBP7.24□□□□□ -1.25
TSG101-207ENST00000543054 BTLAQ7Z6A9 289 aa7.24□□□□□ -1.25
TSG101-207ENST00000543054 CCDC74AQ96AQ1 378 aa7.24□□□□□ -1.25
TSG101-207ENST00000543054 CCSER2Q9H7U1 834 aa7.24□□□□□ -1.25
TSG101-207ENST00000543054 POLMQ9NP87 494 aaPredicted RBP7.24□□□□□ -1.25
TSG101-207ENST00000543054 FAM13BQ9NYF5 915 aa7.24□□□□□ -1.25
TSG101-207ENST00000543054 PPP1R1BQ9UD71 204 aaPredicted RBP7.24□□□□□ -1.25
TSG101-207ENST00000543054 PCDHGB7Q9Y5F8 929 aa7.24□□□□□ -1.25
TSG101-207ENST00000543054 GPC6Q9Y625 555 aaPredicted RBP7.24□□□□□ -1.25
TSG101-207ENST00000543054 KIF21AQ7Z4S6 1674 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 ITGA6P23229 1130 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 EIF4BP23588 611 aaKnown RBP7.23□□□□□ -1.25
TSG101-207ENST00000543054 ARSDP51689 593 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 RACK1P63244 317 aaKnown RBP7.23□□□□□ -1.25
TSG101-207ENST00000543054 POU4F2Q12837 409 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 HIF1AQ16665 826 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 RNFT1Q5M7Z0 435 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 XKR5Q6UX68 686 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 FAM177A1Q8N128 213 aaPredicted RBP7.23□□□□□ -1.25
TSG101-207ENST00000543054 TMEM151AQ8N4L1 468 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 SNX29Q8TEQ0 813 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 FRMD6Q96NE9 622 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 ZIC5Q96T25 663 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 CHRDQ9H2X0 955 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 C12orf49Q9H741 205 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 TMEM63CQ9P1W3 806 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 ADAMTS8Q9UP79 889 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 SPG7Q9UQ90 795 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 RTCBQ9Y3I0 505 aaKnown RBP7.23□□□□□ -1.25
TSG101-207ENST00000543054 NESP48681 1621 aa7.23□□□□□ -1.25
TSG101-207ENST00000543054 RPLP1P05386 114 aaKnown RBP7.22□□□□□ -1.25
TSG101-207ENST00000543054 SLURP2P0DP57 97 aa7.22□□□□□ -1.25
TSG101-207ENST00000543054 TATP17735 454 aaPredicted RBP7.22□□□□□ -1.25
TSG101-207ENST00000543054 RASSF7Q02833 373 aa7.22□□□□□ -1.25
TSG101-207ENST00000543054 TYRO3Q06418 890 aa7.22□□□□□ -1.25
TSG101-207ENST00000543054 MEI1Q5TIA1 1274 aa7.22□□□□□ -1.25
TSG101-207ENST00000543054 ZNF385CQ66K41 422 aaPredicted RBP7.22□□□□□ -1.25
TSG101-207ENST00000543054 CAPN10Q9HC96 672 aa7.22□□□□□ -1.25
TSG101-207ENST00000543054 NPHS2Q9NP85 383 aa7.22□□□□□ -1.25
TSG101-207ENST00000543054 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.22□□□□□ -1.25
TSG101-207ENST00000543054 PTPN12Q05209 780 aaKnown RBP7.21□□□□□ -1.26
TSG101-207ENST00000543054 PDE12Q6L8Q7 609 aaKnown RBP7.21□□□□□ -1.26
TSG101-207ENST00000543054 LRRC69Q6ZNQ3 347 aa7.21□□□□□ -1.26
TSG101-207ENST00000543054 PRICKLE2Q7Z3G6 844 aa7.21□□□□□ -1.26
TSG101-207ENST00000543054 ZNF438Q7Z4V0 828 aa7.21□□□□□ -1.26
TSG101-207ENST00000543054 SLC43A3Q8NBI5 491 aa7.21□□□□□ -1.26
TSG101-207ENST00000543054 TANGO6Q9C0B7 1094 aa7.21□□□□□ -1.26
TSG101-207ENST00000543054 ZFYVE28Q9HCC9 887 aa7.21□□□□□ -1.26
TSG101-207ENST00000543054 DDX41Q9UJV9 622 aaKnown RBP7.21□□□□□ -1.26
TSG101-207ENST00000543054 UBAP1LF5GYI3 381 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 GDF11O95390 407 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 POLR3DP05423 398 aaPredicted RBP7.2□□□□□ -1.26
TSG101-207ENST00000543054 NEFLP07196 543 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 RHOQP17081 205 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 MSX1P28360 303 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 BICDL1Q6ZP65 573 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 SV2AQ7L0J3 742 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 CMTR1Q8N1G2 835 aaKnown RBP7.2□□□□□ -1.26
TSG101-207ENST00000543054 VWA5B2Q8N398 1253 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 SVOPQ8N4V2 548 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 ELP3Q9H9T3 547 aa7.2□□□□□ -1.26
TSG101-207ENST00000543054 SRA1Q9HD15 236 aaKnown RBP7.2□□□□□ -1.26
TSG101-207ENST00000543054 SENP3-EIF4A1A0A087X0R7 540 aa7.19□□□□□ -1.26
TSG101-207ENST00000543054 PHACTR2O75167 634 aa7.19□□□□□ -1.26
TSG101-207ENST00000543054 SUZ12Q15022 739 aaKnown RBP7.19□□□□□ -1.26
TSG101-207ENST00000543054 TTC16Q8NEE8 873 aa7.19□□□□□ -1.26
TSG101-207ENST00000543054 CNTN3Q9P232 1028 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms