RNA–Protein interactions for RNA: ENST00000542346.1

PHC1-211, Transcript of polyhomeotic homolog 1, humanhuman

TSL 5

Gene PHC1, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-211ENST00000542346 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
PHC1-211ENST00000542346 CSF1RP07333 972 aa16.27■□□□□ 0.2
PHC1-211ENST00000542346 PDE6BP35913 854 aa16.27■□□□□ 0.2
PHC1-211ENST00000542346 SF3B3Q15393 1217 aaKnown RBP16.27■□□□□ 0.2
PHC1-211ENST00000542346 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
PHC1-211ENST00000542346 TTLL11Q8NHH1 800 aa16.27■□□□□ 0.2
PHC1-211ENST00000542346 SPEF2Q9C093 1822 aa16.26■□□□□ 0.19
PHC1-211ENST00000542346 CHD4Q14839 1912 aa16.26■□□□□ 0.19
PHC1-211ENST00000542346 MTX1Q13505 466 aa16.26■□□□□ 0.19
PHC1-211ENST00000542346 LMBR1LQ6UX01 489 aa16.26■□□□□ 0.19
PHC1-211ENST00000542346 BRCA1P38398 1863 aaKnown RBP16.26■□□□□ 0.19
PHC1-211ENST00000542346 CACNA1SQ13698 1873 aa16.26■□□□□ 0.19
PHC1-211ENST00000542346 RTL9Q8NET4 1388 aa16.26■□□□□ 0.19
PHC1-211ENST00000542346 CCDC152Q4G0S7 254 aa16.25■□□□□ 0.19
PHC1-211ENST00000542346 CD2APQ9Y5K6 639 aa16.25■□□□□ 0.19
PHC1-211ENST00000542346 COL4A1P02462 1669 aa16.24■□□□□ 0.19
PHC1-211ENST00000542346 CEP85Q6P2H3 762 aa16.24■□□□□ 0.19
PHC1-211ENST00000542346 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
PHC1-211ENST00000542346 SRGNP10124 158 aa16.23■□□□□ 0.19
PHC1-211ENST00000542346 ATP8B2P98198 1209 aa16.23■□□□□ 0.19
PHC1-211ENST00000542346 FAM161AQ3B820 660 aa16.23■□□□□ 0.19
PHC1-211ENST00000542346 RPAP2Q8IXW5 612 aaPredicted RBP16.23■□□□□ 0.19
PHC1-211ENST00000542346 GREM2Q9H772 168 aa16.23■□□□□ 0.19
PHC1-211ENST00000542346 PPP1R1BQ9UD71 204 aaPredicted RBP16.23■□□□□ 0.19
PHC1-211ENST00000542346 PCDHB15Q9Y5E8 787 aa16.23■□□□□ 0.19
PHC1-211ENST00000542346 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
PHC1-211ENST00000542346 HOXA10P31260 410 aaPredicted RBP16.22■□□□□ 0.19
PHC1-211ENST00000542346 TGFB2P61812 414 aa16.22■□□□□ 0.19
PHC1-211ENST00000542346 C2CD5Q86YS7 1000 aa16.22■□□□□ 0.19
PHC1-211ENST00000542346 SIRT2Q8IXJ6 389 aa16.22■□□□□ 0.19
PHC1-211ENST00000542346 RPGRQ92834 1020 aaKnown RBP16.22■□□□□ 0.19
PHC1-211ENST00000542346 CCDC85AQ96PX6 553 aaPredicted RBP16.22■□□□□ 0.19
PHC1-211ENST00000542346 CHMP3Q9Y3E7 222 aa16.22■□□□□ 0.19
PHC1-211ENST00000542346 H0YIN7 160 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 SRGAP3O43295 1099 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 NPR1P16066 1061 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 ITGA6P23229 1130 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 CHRNA5P30532 468 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 POLA2Q14181 598 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 SEC31BQ9NQW1 1179 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 SLX4Q8IY92 1834 aa16.21■□□□□ 0.19
PHC1-211ENST00000542346 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
PHC1-211ENST00000542346 IFIT5Q13325 482 aaKnown RBP16.2■□□□□ 0.18
PHC1-211ENST00000542346 CCDC57Q2TAC2 916 aa16.2■□□□□ 0.18
PHC1-211ENST00000542346 ERICH6BQ5W0A0 696 aa16.2■□□□□ 0.18
PHC1-211ENST00000542346 STYK1Q6J9G0 422 aa16.2■□□□□ 0.18
PHC1-211ENST00000542346 DDX46Q7L014 1031 aaKnown RBP16.2■□□□□ 0.18
PHC1-211ENST00000542346 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
PHC1-211ENST00000542346 CRAMP1Q96RY5 1269 aa16.2■□□□□ 0.18
PHC1-211ENST00000542346 A0A1B0GUL6 1792 aa16.2■□□□□ 0.18
PHC1-211ENST00000542346 A0A0G2JLW4 131 aa16.19■□□□□ 0.18
PHC1-211ENST00000542346 ANKRD18BA2A2Z9 1011 aa16.19■□□□□ 0.18
PHC1-211ENST00000542346 DPEP1P16444 411 aa16.19■□□□□ 0.18
PHC1-211ENST00000542346 KCNA3P22001 575 aa16.19■□□□□ 0.18
PHC1-211ENST00000542346 KLHL34Q8N239 644 aa16.19■□□□□ 0.18
PHC1-211ENST00000542346 FHDC1Q9C0D6 1143 aaPredicted RBP16.19■□□□□ 0.18
PHC1-211ENST00000542346 LRRC37AA6NMS7 1700 aa16.19■□□□□ 0.18
PHC1-211ENST00000542346 YY1P25490 414 aa16.18■□□□□ 0.18
PHC1-211ENST00000542346 CELF1Q92879 486 aaKnown RBP16.18■□□□□ 0.18
PHC1-211ENST00000542346 CDC5LQ99459 802 aaKnown RBP16.18■□□□□ 0.18
PHC1-211ENST00000542346 HMMRO75330 724 aa16.17■□□□□ 0.18
PHC1-211ENST00000542346 ALDH1B1P30837 517 aa16.17■□□□□ 0.18
PHC1-211ENST00000542346 PTPN12Q05209 780 aaKnown RBP16.17■□□□□ 0.18
PHC1-211ENST00000542346 GRAPQ13588 217 aa16.17■□□□□ 0.18
PHC1-211ENST00000542346 NLGN2Q8NFZ4 835 aa16.17■□□□□ 0.18
PHC1-211ENST00000542346 KLHDC4Q8TBB5 520 aa16.17■□□□□ 0.18
PHC1-211ENST00000542346 GRAPLQ8TC17 118 aaPredicted RBP16.17■□□□□ 0.18
PHC1-211ENST00000542346 ZNF622Q969S3 477 aaKnown RBP eCLIP16.17■□□□□ 0.18
PHC1-211ENST00000542346 ZNF594Q96JF6 807 aaPredicted RBP16.17■□□□□ 0.18
PHC1-211ENST00000542346 COPRSQ9NQ92 184 aa16.17■□□□□ 0.18
PHC1-211ENST00000542346 ARFGEF1Q9Y6D6 1849 aa16.17■□□□□ 0.18
PHC1-211ENST00000542346 RPS8P62241 208 aaKnown RBP16.16■□□□□ 0.18
PHC1-211ENST00000542346 HDAC1Q13547 482 aaPredicted RBP16.16■□□□□ 0.18
PHC1-211ENST00000542346 ANKRD18AQ8IVF6 992 aa16.16■□□□□ 0.18
PHC1-211ENST00000542346 CNKSR1Q969H4 720 aa16.16■□□□□ 0.18
PHC1-211ENST00000542346 BBOX1O75936 387 aa16.15■□□□□ 0.18
PHC1-211ENST00000542346 IGHMBP2P38935 993 aaKnown RBP16.15■□□□□ 0.18
PHC1-211ENST00000542346 TAF7LQ5H9L4 462 aa16.15■□□□□ 0.18
PHC1-211ENST00000542346 SYT17Q9BSW7 474 aa16.15■□□□□ 0.18
PHC1-211ENST00000542346 PA2G4Q9UQ80 394 aaKnown RBP16.15■□□□□ 0.18
PHC1-211ENST00000542346 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
PHC1-211ENST00000542346 TTLL6Q8N841 843 aa16.14■□□□□ 0.17
PHC1-211ENST00000542346 BSDC1Q9NW68 430 aaPredicted RBP16.14■□□□□ 0.17
PHC1-211ENST00000542346 PIM2Q9P1W9 311 aa16.14■□□□□ 0.17
PHC1-211ENST00000542346 FBXO3Q9UK99 471 aa16.14■□□□□ 0.17
PHC1-211ENST00000542346 NOP58Q9Y2X3 529 aaKnown RBP16.14■□□□□ 0.17
PHC1-211ENST00000542346 LTBP1Q14766 1721 aa16.14■□□□□ 0.17
PHC1-211ENST00000542346 EYA2O00167 538 aa16.13■□□□□ 0.17
PHC1-211ENST00000542346 PPEF1O14829 653 aaPredicted RBP16.13■□□□□ 0.17
PHC1-211ENST00000542346 CIAO1O76071 339 aa16.13■□□□□ 0.17
PHC1-211ENST00000542346 LDHAL6AQ6ZMR3 332 aa16.13■□□□□ 0.17
PHC1-211ENST00000542346 TMC4Q7Z404 712 aa16.13■□□□□ 0.17
PHC1-211ENST00000542346 MPHOSPH8Q99549 860 aa16.13■□□□□ 0.17
PHC1-211ENST00000542346 PUS3Q9BZE2 481 aaKnown RBP16.13■□□□□ 0.17
PHC1-211ENST00000542346 RWDD1Q9H446 243 aaPredicted RBP16.13■□□□□ 0.17
PHC1-211ENST00000542346 SURF6O75683 361 aaKnown RBP16.12■□□□□ 0.17
PHC1-211ENST00000542346 IGHDP01880 384 aa16.12■□□□□ 0.17
PHC1-211ENST00000542346 LRRC24Q50LG9 513 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms