RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 SRGAP3O43295 1099 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 MYO1BO43795 1136 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.47
GPD2-213ENST00000540309 RESTQ13127 1097 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 GPS2Q13227 327 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 ELF2Q15723 593 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 NAA16Q6N069 864 aaPredicted RBP12.11□□□□□ -0.47
GPD2-213ENST00000540309 CEP57L1Q8IYX8 460 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 BICD2Q8TD16 824 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 UBXN6Q9BZV1 441 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.11□□□□□ -0.47
GPD2-213ENST00000540309 SPG7Q9UQ90 795 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 RBM8AQ9Y5S9 174 aaKnown RBP12.11□□□□□ -0.47
GPD2-213ENST00000540309 FHOD1Q9Y613 1164 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 ERBB3P21860 1342 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 IGSF3O75054 1194 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
GPD2-213ENST00000540309 PTH1RQ03431 593 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 SNW1Q13573 536 aaKnown RBP12.1□□□□□ -0.47
GPD2-213ENST00000540309 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 FCHSD1Q86WN1 690 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 PSD3Q9NYI0 1048 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 ADCY9O60503 1353 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 USP54Q70EL1 1684 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 MAP3K19Q56UN5 1328 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 GNAT3A8MTJ3 354 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 SLC27A2O14975 620 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
GPD2-213ENST00000540309 MSL3Q8N5Y2 521 aaKnown RBP12.1□□□□□ -0.47
GPD2-213ENST00000540309 ZNF446Q9NWS9 450 aa12.1□□□□□ -0.47
GPD2-213ENST00000540309 NPHP4O75161 1426 aaPredicted RBP12.1□□□□□ -0.47
GPD2-213ENST00000540309 MED1Q15648 1581 aaPredicted RBP12.09□□□□□ -0.47
GPD2-213ENST00000540309 MED23Q9ULK4 1368 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 NAA30Q147X3 362 aaPredicted RBP12.09□□□□□ -0.47
GPD2-213ENST00000540309 DHX40Q8IX18 779 aaKnown RBP12.09□□□□□ -0.47
GPD2-213ENST00000540309 ZNF592Q92610 1267 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 NAP1L2Q9ULW6 460 aaPredicted RBP12.09□□□□□ -0.47
GPD2-213ENST00000540309 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.09□□□□□ -0.47
GPD2-213ENST00000540309 EFCAB8A8MWE9 144 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 ALDH1L1O75891 902 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 PNMA6AP0CW24 399 aaPredicted RBP12.09□□□□□ -0.47
GPD2-213ENST00000540309 TUBB4BP68371 445 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 FAM160A1Q05DH4 1040 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 CTR9Q6PD62 1173 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 LARP1Q6PKG0 1096 aaKnown RBP12.09□□□□□ -0.47
GPD2-213ENST00000540309 SMARCC2Q8TAQ2 1214 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 ZNF396Q96N95 335 aaPredicted RBP12.09□□□□□ -0.47
GPD2-213ENST00000540309 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
GPD2-213ENST00000540309 USP27XA6NNY8 438 aa12.08□□□□□ -0.48
GPD2-213ENST00000540309 ETF1P62495 437 aaKnown RBP12.08□□□□□ -0.48
GPD2-213ENST00000540309 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
GPD2-213ENST00000540309 TMCO3Q6UWJ1 677 aa12.08□□□□□ -0.48
GPD2-213ENST00000540309 CCDC73Q6ZRK6 1079 aa12.08□□□□□ -0.48
GPD2-213ENST00000540309 ENGASEQ8NFI3 743 aa12.08□□□□□ -0.48
GPD2-213ENST00000540309 A0A1W2PQ27 194 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 A0A1W2PQ64 194 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 A0A1W2PQD8 194 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 GOLGA6L9A6NEM1 432 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 KINO60870 393 aaKnown RBP12.07□□□□□ -0.48
GPD2-213ENST00000540309 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
GPD2-213ENST00000540309 CLCN6P51797 869 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
GPD2-213ENST00000540309 CCDC158Q5M9N0 1113 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 BEND3Q5T5X7 828 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 E4F1Q66K89 784 aaPredicted RBP12.07□□□□□ -0.48
GPD2-213ENST00000540309 NECAB1Q8N987 351 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 CWC15Q9P013 229 aaKnown RBP12.07□□□□□ -0.48
GPD2-213ENST00000540309 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 SLIT1O75093 1534 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 IFIT2P09913 472 aaKnown RBP12.07□□□□□ -0.48
GPD2-213ENST00000540309 CPA1P15085 419 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 PSME1Q06323 249 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 FERMT3Q86UX7 667 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 IQUBQ8NA54 791 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 UBXN4Q92575 508 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 PPP1R13BQ96KQ4 1090 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 DNAI1Q9UI46 699 aa12.07□□□□□ -0.48
GPD2-213ENST00000540309 MRC1P22897 1456 aa12.06□□□□□ -0.48
GPD2-213ENST00000540309 NCAPD2Q15021 1401 aa12.06□□□□□ -0.48
GPD2-213ENST00000540309 SFPQP23246 707 aaKnown RBP eCLIP12.06□□□□□ -0.48
GPD2-213ENST00000540309 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
GPD2-213ENST00000540309 PLA2G4AP47712 749 aa12.06□□□□□ -0.48
GPD2-213ENST00000540309 HNRNPH2P55795 449 aaKnown RBP12.06□□□□□ -0.48
GPD2-213ENST00000540309 DNAAF4Q8WXU2 420 aa12.06□□□□□ -0.48
GPD2-213ENST00000540309 MIS18AQ9NYP9 233 aa12.06□□□□□ -0.48
GPD2-213ENST00000540309 TFIP11Q9UBB9 837 aaKnown RBP12.06□□□□□ -0.48
GPD2-213ENST00000540309 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
GPD2-213ENST00000540309 MAP4K4O95819 1239 aaPredicted RBP12.05□□□□□ -0.48
GPD2-213ENST00000540309 LRRFIP1Q32MZ4 808 aaKnown RBP12.05□□□□□ -0.48
GPD2-213ENST00000540309 HDGFL1Q5TGJ6 251 aa12.05□□□□□ -0.48
GPD2-213ENST00000540309 C11orf57Q6ZUT1 292 aaPredicted RBP12.05□□□□□ -0.48
GPD2-213ENST00000540309 MPHOSPH8Q99549 860 aa12.05□□□□□ -0.48
GPD2-213ENST00000540309 ORC3Q9UBD5 711 aaPredicted RBP12.05□□□□□ -0.48
GPD2-213ENST00000540309 USP16Q9Y5T5 823 aa12.05□□□□□ -0.48
GPD2-213ENST00000540309 PRR36Q9H6K5 1346 aa12.05□□□□□ -0.48
GPD2-213ENST00000540309 CEMIPQ8WUJ3 1361 aa12.05□□□□□ -0.48
GPD2-213ENST00000540309 H3BQV1 296 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms