RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 GOLIM4O00461 696 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 FTOQ9C0B1 505 aaKnown RBP eCLIP16.26■□□□□ 0.19
BNIP3-202ENST00000540159 SNRKQ9NRH2 765 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 COL15A1P39059 1388 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 GOLGA6L4A6NEF3 574 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 A1BGP04217 495 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
BNIP3-202ENST00000540159 TNNI3KQ59H18 835 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 CHMP4AQ9BY43 222 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 FPGT-TNNI3KV9GXZ4 949 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 RGPD5Q99666 1765 aa16.26■□□□□ 0.19
BNIP3-202ENST00000540159 KDM4AO75164 1064 aa16.25■□□□□ 0.19
BNIP3-202ENST00000540159 CCT2P78371 535 aaKnown RBP16.25■□□□□ 0.19
BNIP3-202ENST00000540159 ATP6V1DQ9Y5K8 247 aa16.25■□□□□ 0.19
BNIP3-202ENST00000540159 ATF3P18847 181 aa16.25■□□□□ 0.19
BNIP3-202ENST00000540159 BRF1Q92994 677 aa16.25■□□□□ 0.19
BNIP3-202ENST00000540159 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
BNIP3-202ENST00000540159 KDM3BQ7LBC6 1761 aa16.25■□□□□ 0.19
BNIP3-202ENST00000540159 TAF5LO75529 589 aa16.24■□□□□ 0.19
BNIP3-202ENST00000540159 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
BNIP3-202ENST00000540159 Q6ZUG5 572 aa16.24■□□□□ 0.19
BNIP3-202ENST00000540159 LUZP1Q86V48 1076 aa16.24■□□□□ 0.19
BNIP3-202ENST00000540159 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
BNIP3-202ENST00000540159 SNRPA1P09661 255 aaKnown RBP16.24■□□□□ 0.19
BNIP3-202ENST00000540159 RPS6KB1P23443 525 aa16.24■□□□□ 0.19
BNIP3-202ENST00000540159 NCOA5Q9HCD5 579 aaKnown RBP16.24■□□□□ 0.19
BNIP3-202ENST00000540159 DACT1Q9NYF0 836 aa16.24■□□□□ 0.19
BNIP3-202ENST00000540159 ERCC4Q92889 916 aaPredicted RBP16.23■□□□□ 0.19
BNIP3-202ENST00000540159 SH2B1Q9NRF2 756 aaPredicted RBP16.23■□□□□ 0.19
BNIP3-202ENST00000540159 MED1Q15648 1581 aaPredicted RBP16.23■□□□□ 0.19
BNIP3-202ENST00000540159 MEGF6O75095 1541 aa16.23■□□□□ 0.19
BNIP3-202ENST00000540159 CYP21A2P08686 494 aa16.23■□□□□ 0.19
BNIP3-202ENST00000540159 PSMA5P28066 241 aa16.23■□□□□ 0.19
BNIP3-202ENST00000540159 KRT85P78386 507 aa16.23■□□□□ 0.19
BNIP3-202ENST00000540159 BICD2Q8TD16 824 aa16.23■□□□□ 0.19
BNIP3-202ENST00000540159 LRRC24Q50LG9 513 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 ZSCAN31Q96LW9 406 aaPredicted RBP16.22■□□□□ 0.19
BNIP3-202ENST00000540159 SPATA32Q96LK8 384 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 STRN4Q9NRL3 753 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 HEG1Q9ULI3 1381 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 H3BQV1 296 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 HAND2P61296 217 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 IL17RAQ96F46 866 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
BNIP3-202ENST00000540159 ZNF500O60304 480 aaPredicted RBP16.21■□□□□ 0.19
BNIP3-202ENST00000540159 FKBP4Q02790 459 aaKnown RBP eCLIP16.21■□□□□ 0.19
BNIP3-202ENST00000540159 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.19
BNIP3-202ENST00000540159 FMNL2Q96PY5 1086 aa16.21■□□□□ 0.19
BNIP3-202ENST00000540159 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
BNIP3-202ENST00000540159 PUS3Q9BZE2 481 aaKnown RBP16.21■□□□□ 0.19
BNIP3-202ENST00000540159 CHD2O14647 1828 aaKnown RBP16.21■□□□□ 0.19
BNIP3-202ENST00000540159 APOBRQ0VD83 1088 aa16.21■□□□□ 0.19
BNIP3-202ENST00000540159 TTLL5Q6EMB2 1281 aa16.21■□□□□ 0.19
BNIP3-202ENST00000540159 NPHP4O75161 1426 aaPredicted RBP16.2■□□□□ 0.18
BNIP3-202ENST00000540159 A0A0G2JS52 829 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 NBPF26B4DH59 902 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 HSPA2P54652 639 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 NBPF14Q5TI25 921 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 NBPF10Q6P3W6 841 aaKnown RBP16.2■□□□□ 0.18
BNIP3-202ENST00000540159 NBPF15Q8N660 670 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 TM6SF1Q9BZW5 370 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 C19orf44Q9H6X5 657 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
BNIP3-202ENST00000540159 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
BNIP3-202ENST00000540159 STOX1Q6ZVD7 989 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 TMEM87AQ8NBN3 555 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 HIP1O00291 1037 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 TPM2P07951 284 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 TOM1L2Q6ZVM7 507 aa16.2■□□□□ 0.18
BNIP3-202ENST00000540159 ZNF609O15014 1411 aa16.19■□□□□ 0.18
BNIP3-202ENST00000540159 NR1I2O75469 434 aa16.19■□□□□ 0.18
BNIP3-202ENST00000540159 HS1BP3Q53T59 392 aa16.19■□□□□ 0.18
BNIP3-202ENST00000540159 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
BNIP3-202ENST00000540159 NUP62CLQ9H1M0 184 aa16.19■□□□□ 0.18
BNIP3-202ENST00000540159 EPB41L2O43491 1005 aaKnown RBP16.19■□□□□ 0.18
BNIP3-202ENST00000540159 DRC7Q8IY82 874 aa16.19■□□□□ 0.18
BNIP3-202ENST00000540159 TNMDQ9H2S6 317 aa16.19■□□□□ 0.18
BNIP3-202ENST00000540159 PI16Q6UXB8 463 aa16.18■□□□□ 0.18
BNIP3-202ENST00000540159 SYNE4Q8N205 404 aa16.18■□□□□ 0.18
BNIP3-202ENST00000540159 OTUD7BQ6GQQ9 843 aa16.18■□□□□ 0.18
BNIP3-202ENST00000540159 LRP10Q7Z4F1 713 aa16.18■□□□□ 0.18
BNIP3-202ENST00000540159 UTYO14607 1347 aa16.18■□□□□ 0.18
BNIP3-202ENST00000540159 LMO7Q8WWI1 1683 aa16.18■□□□□ 0.18
BNIP3-202ENST00000540159 MED23Q9ULK4 1368 aa16.18■□□□□ 0.18
BNIP3-202ENST00000540159 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
BNIP3-202ENST00000540159 SCRN1Q12765 414 aa16.17■□□□□ 0.18
BNIP3-202ENST00000540159 COPRSQ9NQ92 184 aa16.17■□□□□ 0.18
BNIP3-202ENST00000540159 PYCARDQ9ULZ3 195 aa16.17■□□□□ 0.18
BNIP3-202ENST00000540159 C1orf167Q5SNV9 1468 aa16.17■□□□□ 0.18
BNIP3-202ENST00000540159 CCDC192P0DO97 292 aa16.17■□□□□ 0.18
BNIP3-202ENST00000540159 ATP5JP18859 108 aa16.17■□□□□ 0.18
BNIP3-202ENST00000540159 MAP3K11Q16584 847 aa16.17■□□□□ 0.18
BNIP3-202ENST00000540159 LEO1Q8WVC0 666 aaPredicted RBP16.17■□□□□ 0.18
BNIP3-202ENST00000540159 DCAF5Q96JK2 942 aa16.17■□□□□ 0.18
BNIP3-202ENST00000540159 RRP9O43818 475 aaKnown RBP16.16■□□□□ 0.18
BNIP3-202ENST00000540159 MCMDC2Q4G0Z9 681 aa16.16■□□□□ 0.18
BNIP3-202ENST00000540159 UBE2Q2Q8WVN8 375 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms