RNA–Protein interactions for RNA: ENST00000540091.1

SPPL3-205, Transcript of signal peptide peptidase like 3, humanhuman

TSL 4

Gene SPPL3, Length 531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-205ENST00000540091 ZNF775Q96BV0 537 aaPredicted RBP7.53□□□□□ -1.2
SPPL3-205ENST00000540091 ZNF594Q96JF6 807 aaPredicted RBP7.53□□□□□ -1.2
SPPL3-205ENST00000540091 ZNF358Q9NW07 568 aa7.53□□□□□ -1.2
SPPL3-205ENST00000540091 SERTAD1Q9UHV2 236 aa7.53□□□□□ -1.2
SPPL3-205ENST00000540091 TIMELESSQ9UNS1 1208 aa7.53□□□□□ -1.2
SPPL3-205ENST00000540091 ROBO1Q9Y6N7 1651 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 SLC35F4A4IF30 521 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 CDK2AP1O14519 115 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 ZBTB7BO15156 539 aaPredicted RBP7.52□□□□□ -1.21
SPPL3-205ENST00000540091 RFX1P22670 979 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 ITGAEP38570 1179 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 SEC13P55735 322 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 POU4F2Q12837 409 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 MTFR1Q15390 333 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 CCDC155Q8N6L0 562 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
SPPL3-205ENST00000540091 NIFKQ9BYG3 293 aaKnown RBP7.52□□□□□ -1.21
SPPL3-205ENST00000540091 DYRK1BQ9Y463 629 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 DCCP43146 1447 aa7.52□□□□□ -1.21
SPPL3-205ENST00000540091 KIF1BO60333 1816 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L15C9J2P7 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L10C9JJH3 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L13C9JLJ4 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L12C9JPN9 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L11C9JVI0 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L21D6R901 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L18D6R9N7 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L22D6RA61 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L17D6RBQ6 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L19D6RCP7 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L20D6RJB6 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 PPFIA3O75145 1194 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 USP17L24Q0WX57 530 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 PTK7Q13308 1070 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 IRF7Q92985 503 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 GMCL1Q96IK5 515 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 TIMMDC1Q9NPL8 285 aa7.51□□□□□ -1.21
SPPL3-205ENST00000540091 XRN1Q8IZH2 1706 aaKnown RBP7.5□□□□□ -1.21
SPPL3-205ENST00000540091 CLTCL1P53675 1640 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 NRXN3Q9Y4C0 1643 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 A0A1B0GTH6 734 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 H3BM21 787 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 WFS1O76024 890 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 STAU1O95793 577 aaKnown RBP7.5□□□□□ -1.21
SPPL3-205ENST00000540091 RHOQP17081 205 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 ANKMY2Q8IV38 441 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 CCDC82Q8N4S0 544 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 PBXIP1Q96AQ6 731 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 CHMP3Q9Y3E7 222 aa7.5□□□□□ -1.21
SPPL3-205ENST00000540091 NEXMIFQ5QGS0 1516 aa7.49□□□□□ -1.21
SPPL3-205ENST00000540091 H7C1W4 665 aa7.49□□□□□ -1.21
SPPL3-205ENST00000540091 DPYDQ12882 1025 aa7.49□□□□□ -1.21
SPPL3-205ENST00000540091 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
SPPL3-205ENST00000540091 C1orf216Q8TAB5 229 aa7.49□□□□□ -1.21
SPPL3-205ENST00000540091 C19orf44Q9H6X5 657 aa7.49□□□□□ -1.21
SPPL3-205ENST00000540091 SCHIP1Q9P0W5 487 aaPredicted RBP7.49□□□□□ -1.21
SPPL3-205ENST00000540091 PRAG1Q86YV5 1406 aa7.49□□□□□ -1.21
SPPL3-205ENST00000540091 RPGRIP1LQ68CZ1 1315 aa7.49□□□□□ -1.21
SPPL3-205ENST00000540091 AHDC1Q5TGY3 1603 aaPredicted RBP7.49□□□□□ -1.21
SPPL3-205ENST00000540091 SENP3-EIF4A1A0A087X0R7 540 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 PHLPP1O60346 1717 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 ITGA6P23229 1130 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 VEGFBP49765 207 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 NFX1Q12986 1120 aaKnown RBP7.48□□□□□ -1.21
SPPL3-205ENST00000540091 ELOAQ14241 798 aaKnown RBP7.48□□□□□ -1.21
SPPL3-205ENST00000540091 NBPF1Q3BBV0 1214 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 C4orf17Q53FE4 359 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 TREML4Q6UXN2 200 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 GAS2L2Q8NHY3 880 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 FAM200AQ8TCP9 573 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 SLAIN2Q9P270 581 aa7.48□□□□□ -1.21
SPPL3-205ENST00000540091 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.48□□□□□ -1.21
SPPL3-205ENST00000540091 JCADQ9P266 1359 aa7.47□□□□□ -1.21
SPPL3-205ENST00000540091 PTCH1Q13635 1447 aa7.47□□□□□ -1.21
SPPL3-205ENST00000540091 F11P03951 625 aa7.47□□□□□ -1.21
SPPL3-205ENST00000540091 CSB-PGBD3P0DP91 1061 aa7.47□□□□□ -1.21
SPPL3-205ENST00000540091 ATF3P18847 181 aa7.47□□□□□ -1.21
SPPL3-205ENST00000540091 PLA2G4AP47712 749 aa7.47□□□□□ -1.21
SPPL3-205ENST00000540091 ZNF326Q5BKZ1 582 aaKnown RBP7.47□□□□□ -1.21
SPPL3-205ENST00000540091 PGBD3Q8N328 593 aa7.47□□□□□ -1.21
SPPL3-205ENST00000540091 GAS2L1Q99501 681 aaPredicted RBP7.47□□□□□ -1.21
SPPL3-205ENST00000540091 CABP1Q9NZU7 370 aa7.47□□□□□ -1.21
SPPL3-205ENST00000540091 PTPRUQ92729 1446 aa7.46□□□□□ -1.21
SPPL3-205ENST00000540091 COL16A1Q07092 1604 aaPredicted RBP7.46□□□□□ -1.21
SPPL3-205ENST00000540091 SFI1A8K8P3 1242 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 DKK1O94907 266 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 ATG7O95352 703 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 VSIG8P0DPA2 414 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 TATP17735 454 aaPredicted RBP7.46□□□□□ -1.22
SPPL3-205ENST00000540091 PHKA2P46019 1235 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 EPHA4P54764 986 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 LBRQ14739 615 aaKnown RBP7.46□□□□□ -1.22
SPPL3-205ENST00000540091 FOXR1Q6PIV2 292 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 TNS4Q8IZW8 715 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 NANOS1Q8WY41 292 aaKnown RBP7.46□□□□□ -1.22
SPPL3-205ENST00000540091 HINFPQ9BQA5 517 aa7.46□□□□□ -1.22
SPPL3-205ENST00000540091 NOVA2Q9UNW9 492 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms