RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 TRMT1Q9NXH9 659 aaKnown RBP20.26■□□□□ 0.83
C2CD3-213ENST00000539061 CCZ1BP86790 482 aa20.25■□□□□ 0.83
C2CD3-213ENST00000539061 CCZ1P86791 482 aaPredicted RBP20.25■□□□□ 0.83
C2CD3-213ENST00000539061 STK3Q13188 491 aa20.25■□□□□ 0.83
C2CD3-213ENST00000539061 COL9A3Q14050 684 aaPredicted RBP20.25■□□□□ 0.83
C2CD3-213ENST00000539061 SNRKQ9NRH2 765 aa20.25■□□□□ 0.83
C2CD3-213ENST00000539061 RESTQ13127 1097 aa20.25■□□□□ 0.83
C2CD3-213ENST00000539061 FILIP1Q7Z7B0 1213 aa20.25■□□□□ 0.83
C2CD3-213ENST00000539061 ZSCAN16Q9H4T2 348 aaPredicted RBP20.25■□□□□ 0.83
C2CD3-213ENST00000539061 USP16Q9Y5T5 823 aa20.25■□□□□ 0.83
C2CD3-213ENST00000539061 NUTM2FA1L443 756 aa20.24■□□□□ 0.83
C2CD3-213ENST00000539061 PI4KAP2A4QPH2 592 aa20.24■□□□□ 0.83
C2CD3-213ENST00000539061 EIF2S2P20042 333 aaKnown RBP20.24■□□□□ 0.83
C2CD3-213ENST00000539061 PI4KAP1Q8N8J0 262 aa20.24■□□□□ 0.83
C2CD3-213ENST00000539061 TIGD1Q96MW7 591 aa20.24■□□□□ 0.83
C2CD3-213ENST00000539061 AACSQ86V21 672 aa20.23■□□□□ 0.83
C2CD3-213ENST00000539061 H3BQV1 296 aa20.23■□□□□ 0.83
C2CD3-213ENST00000539061 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
C2CD3-213ENST00000539061 HMG20BQ9P0W2 317 aa20.23■□□□□ 0.83
C2CD3-213ENST00000539061 CALCOCO1Q9P1Z2 691 aa20.23■□□□□ 0.83
C2CD3-213ENST00000539061 GSDMDP57764 484 aa20.22■□□□□ 0.83
C2CD3-213ENST00000539061 BMS1Q14692 1282 aaKnown RBP20.22■□□□□ 0.83
C2CD3-213ENST00000539061 BRF1Q92994 677 aa20.22■□□□□ 0.83
C2CD3-213ENST00000539061 CHMP4AQ9BY43 222 aa20.22■□□□□ 0.83
C2CD3-213ENST00000539061 FMN2Q9NZ56 1722 aa20.22■□□□□ 0.83
C2CD3-213ENST00000539061 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
C2CD3-213ENST00000539061 TSGA10IPQ3SY00 556 aa20.21■□□□□ 0.83
C2CD3-213ENST00000539061 ANO10Q9NW15 660 aa20.21■□□□□ 0.83
C2CD3-213ENST00000539061 JAK2O60674 1132 aa20.21■□□□□ 0.83
C2CD3-213ENST00000539061 GTF3C6Q969F1 213 aa20.21■□□□□ 0.83
C2CD3-213ENST00000539061 NPHP4O75161 1426 aaPredicted RBP20.21■□□□□ 0.83
C2CD3-213ENST00000539061 ADCY9O60503 1353 aa20.2■□□□□ 0.83
C2CD3-213ENST00000539061 ROBO2Q9HCK4 1378 aa20.2■□□□□ 0.83
C2CD3-213ENST00000539061 ERBB3P21860 1342 aa20.2■□□□□ 0.82
C2CD3-213ENST00000539061 A0A0D9SFI3 127 aa20.2■□□□□ 0.82
C2CD3-213ENST00000539061 CCAR1Q8IX12 1150 aaKnown RBP20.2■□□□□ 0.82
C2CD3-213ENST00000539061 DHX40Q8IX18 779 aaKnown RBP20.2■□□□□ 0.82
C2CD3-213ENST00000539061 ZNF446Q9NWS9 450 aa20.2■□□□□ 0.82
C2CD3-213ENST00000539061 CHPF2Q9P2E5 772 aa20.2■□□□□ 0.82
C2CD3-213ENST00000539061 CDK11BP21127 795 aaKnown RBP20.19■□□□□ 0.82
C2CD3-213ENST00000539061 PA2G4Q9UQ80 394 aaKnown RBP20.19■□□□□ 0.82
C2CD3-213ENST00000539061 TAF6LQ9Y6J9 622 aa20.19■□□□□ 0.82
C2CD3-213ENST00000539061 TNRQ92752 1358 aa20.19■□□□□ 0.82
C2CD3-213ENST00000539061 SNW1Q13573 536 aaKnown RBP20.19■□□□□ 0.82
C2CD3-213ENST00000539061 CCDC73Q6ZRK6 1079 aa20.19■□□□□ 0.82
C2CD3-213ENST00000539061 DDX11Q96FC9 970 aa20.19■□□□□ 0.82
C2CD3-213ENST00000539061 L2HGDHQ9H9P8 463 aa20.19■□□□□ 0.82
C2CD3-213ENST00000539061 HDAC5Q9UQL6 1122 aa20.19■□□□□ 0.82
C2CD3-213ENST00000539061 ERICH4A6NGS2 130 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 ZBTB22O15209 634 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 HOXB7P09629 217 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 H2AFXP16104 143 aaPredicted RBP20.18■□□□□ 0.82
C2CD3-213ENST00000539061 IRX5P78411 483 aaPredicted RBP20.18■□□□□ 0.82
C2CD3-213ENST00000539061 KRT32Q14532 448 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 NOL10Q9BSC4 688 aaKnown RBP20.18■□□□□ 0.82
C2CD3-213ENST00000539061 FSD1Q9BTV5 496 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 CEP57L1Q8IYX8 460 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 C9orf78Q9NZ63 289 aaPredicted RBP20.18■□□□□ 0.82
C2CD3-213ENST00000539061 IMPACTQ9P2X3 320 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 RCOR1Q9UKL0 485 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 NPHP1O15259 732 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 KINO60870 393 aaKnown RBP20.18■□□□□ 0.82
C2CD3-213ENST00000539061 CEBPZQ03701 1054 aaKnown RBP20.18■□□□□ 0.82
C2CD3-213ENST00000539061 OSBPL5Q9H0X9 879 aaPredicted RBP20.18■□□□□ 0.82
C2CD3-213ENST00000539061 ST7Q9NRC1 585 aa20.18■□□□□ 0.82
C2CD3-213ENST00000539061 NAT10Q9H0A0 1025 aaKnown RBP20.17■□□□□ 0.82
C2CD3-213ENST00000539061 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
C2CD3-213ENST00000539061 MED23Q9ULK4 1368 aa20.17■□□□□ 0.82
C2CD3-213ENST00000539061 TOPAZ1Q8N9V7 1692 aa20.17■□□□□ 0.82
C2CD3-213ENST00000539061 ERCC6LQ2NKX8 1250 aa20.16■□□□□ 0.82
C2CD3-213ENST00000539061 TUBB4AP04350 444 aa20.16■□□□□ 0.82
C2CD3-213ENST00000539061 EAF2Q96CJ1 260 aaPredicted RBP20.16■□□□□ 0.82
C2CD3-213ENST00000539061 ALDH1L1O75891 902 aa20.15■□□□□ 0.82
C2CD3-213ENST00000539061 ADD1P35611 737 aaKnown RBP20.15■□□□□ 0.82
C2CD3-213ENST00000539061 AOPEPQ8N6M6 819 aa20.15■□□□□ 0.82
C2CD3-213ENST00000539061 NEK1Q96PY6 1258 aa20.15■□□□□ 0.82
C2CD3-213ENST00000539061 CCDC8Q9H0W5 538 aaPredicted RBP20.15■□□□□ 0.82
C2CD3-213ENST00000539061 GOLPH3LQ9H4A5 285 aa20.15■□□□□ 0.82
C2CD3-213ENST00000539061 HSP90B1P14625 803 aaKnown RBP20.15■□□□□ 0.82
C2CD3-213ENST00000539061 G3BP1Q13283 466 aaKnown RBP eCLIP20.15■□□□□ 0.82
C2CD3-213ENST00000539061 E4F1Q66K89 784 aaPredicted RBP20.15■□□□□ 0.82
C2CD3-213ENST00000539061 BOLA2Q9H3K6 86 aa20.15■□□□□ 0.82
C2CD3-213ENST00000539061 PTPRUQ92729 1446 aa20.14■□□□□ 0.82
C2CD3-213ENST00000539061 CYP2C19P33261 490 aa20.14■□□□□ 0.82
C2CD3-213ENST00000539061 FAM160A1Q05DH4 1040 aa20.14■□□□□ 0.82
C2CD3-213ENST00000539061 JCADQ9P266 1359 aa20.14■□□□□ 0.81
C2CD3-213ENST00000539061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.14■□□□□ 0.81
C2CD3-213ENST00000539061 PSDA5PKW4 1024 aaPredicted RBP20.14■□□□□ 0.81
C2CD3-213ENST00000539061 CCDC93Q567U6 631 aa20.14■□□□□ 0.81
C2CD3-213ENST00000539061 USPL1Q5W0Q7 1092 aa20.14■□□□□ 0.81
C2CD3-213ENST00000539061 ZNF589Q86UQ0 364 aaPredicted RBP20.14■□□□□ 0.81
C2CD3-213ENST00000539061 CCDC150Q8NCX0 1101 aa20.14■□□□□ 0.81
C2CD3-213ENST00000539061 PPP1R13BQ96KQ4 1090 aa20.14■□□□□ 0.81
C2CD3-213ENST00000539061 FHOD1Q9Y613 1164 aa20.14■□□□□ 0.81
C2CD3-213ENST00000539061 TAF5LO75529 589 aa20.13■□□□□ 0.81
C2CD3-213ENST00000539061 SASH1O94885 1247 aa20.13■□□□□ 0.81
C2CD3-213ENST00000539061 CLCN6P51797 869 aa20.13■□□□□ 0.81
C2CD3-213ENST00000539061 NUTM2GQ5VZR2 741 aa20.13■□□□□ 0.81
C2CD3-213ENST00000539061 NAA16Q6N069 864 aaPredicted RBP20.13■□□□□ 0.81
C2CD3-213ENST00000539061 NBPF11Q86T75 865 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms