RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 ELOA3BQ3SY89 546 aa8.73□□□□□ -1.01
GCSHP4-201ENST00000538792 FAM26DQ5JW98 314 aa8.73□□□□□ -1.01
GCSHP4-201ENST00000538792 ELOA3Q8NG57 546 aa8.73□□□□□ -1.01
GCSHP4-201ENST00000538792 BHMTQ93088 406 aa8.73□□□□□ -1.01
GCSHP4-201ENST00000538792 MICAL2O94851 1124 aa8.72□□□□□ -1.01
GCSHP4-201ENST00000538792 TNFRSF25Q93038 417 aa8.72□□□□□ -1.01
GCSHP4-201ENST00000538792 IFT43Q96FT9 208 aa8.72□□□□□ -1.01
GCSHP4-201ENST00000538792 GSX2Q9BZM3 304 aa8.72□□□□□ -1.01
GCSHP4-201ENST00000538792 SUV39H2Q9H5I1 410 aa8.72□□□□□ -1.01
GCSHP4-201ENST00000538792 MKL2Q9ULH7 1088 aa8.72□□□□□ -1.01
GCSHP4-201ENST00000538792 RIMBP3CA6NJZ7 1639 aa8.72□□□□□ -1.01
GCSHP4-201ENST00000538792 RIMBP3BA6NNM3 1639 aa8.72□□□□□ -1.01
GCSHP4-201ENST00000538792 RIMBP3Q9UFD9 1639 aa8.72□□□□□ -1.01
GCSHP4-201ENST00000538792 MAGI1Q96QZ7 1491 aaPredicted RBP8.71□□□□□ -1.01
GCSHP4-201ENST00000538792 ADARB2-AS1A8MUL3 147 aa8.71□□□□□ -1.02
GCSHP4-201ENST00000538792 OPLAHO14841 1288 aa8.71□□□□□ -1.02
GCSHP4-201ENST00000538792 NAA30Q147X3 362 aaPredicted RBP8.71□□□□□ -1.02
GCSHP4-201ENST00000538792 USP20Q9Y2K6 914 aa8.71□□□□□ -1.02
GCSHP4-201ENST00000538792 ARHGEF11O15085 1522 aa8.7□□□□□ -1.02
GCSHP4-201ENST00000538792 COL8A1P27658 744 aa8.7□□□□□ -1.02
GCSHP4-201ENST00000538792 C16orf46Q6P387 395 aa8.7□□□□□ -1.02
GCSHP4-201ENST00000538792 COL26A1Q96A83 441 aa8.7□□□□□ -1.02
GCSHP4-201ENST00000538792 DCAF5Q96JK2 942 aa8.7□□□□□ -1.02
GCSHP4-201ENST00000538792 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.7□□□□□ -1.02
GCSHP4-201ENST00000538792 STARD13Q9Y3M8 1113 aa8.7□□□□□ -1.02
GCSHP4-201ENST00000538792 TMEM88BA6NKF7 163 aa8.69□□□□□ -1.02
GCSHP4-201ENST00000538792 TNFRSF10BO14763 440 aa8.69□□□□□ -1.02
GCSHP4-201ENST00000538792 ATP2B4P23634 1241 aa8.69□□□□□ -1.02
GCSHP4-201ENST00000538792 SCNN1AP37088 669 aa8.69□□□□□ -1.02
GCSHP4-201ENST00000538792 ARSDP51689 593 aa8.69□□□□□ -1.02
GCSHP4-201ENST00000538792 TREML1Q86YW5 311 aa8.69□□□□□ -1.02
GCSHP4-201ENST00000538792 ETFBKMTQ8IXQ9 262 aa8.69□□□□□ -1.02
GCSHP4-201ENST00000538792 SYNJ2O15056 1496 aa8.69□□□□□ -1.02
GCSHP4-201ENST00000538792 CLASP1Q7Z460 1538 aa8.69□□□□□ -1.02
GCSHP4-201ENST00000538792 CARNS1A5YM72 827 aa8.68□□□□□ -1.02
GCSHP4-201ENST00000538792 ITGB2P05107 769 aa8.68□□□□□ -1.02
GCSHP4-201ENST00000538792 ADH7P40394 386 aa8.68□□□□□ -1.02
GCSHP4-201ENST00000538792 NEUROD1Q13562 356 aa8.68□□□□□ -1.02
GCSHP4-201ENST00000538792 CCINQ13939 588 aa8.68□□□□□ -1.02
GCSHP4-201ENST00000538792 GNB5O14775 395 aa8.67□□□□□ -1.02
GCSHP4-201ENST00000538792 PPP1R15AO75807 674 aaPredicted RBP8.67□□□□□ -1.02
GCSHP4-201ENST00000538792 NFKB1P19838 968 aa8.67□□□□□ -1.02
GCSHP4-201ENST00000538792 ALAS2P22557 587 aa8.67□□□□□ -1.02
GCSHP4-201ENST00000538792 ZFATQ9P243 1243 aa8.67□□□□□ -1.02
GCSHP4-201ENST00000538792 SEPT3Q9UH03 358 aa8.67□□□□□ -1.02
GCSHP4-201ENST00000538792 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
GCSHP4-201ENST00000538792 RTCBQ9Y3I0 505 aaKnown RBP8.67□□□□□ -1.02
GCSHP4-201ENST00000538792 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.67□□□□□ -1.02
GCSHP4-201ENST00000538792 ADAMTS12P58397 1594 aa8.66□□□□□ -1.02
GCSHP4-201ENST00000538792 ALBP02768 609 aa8.66□□□□□ -1.02
GCSHP4-201ENST00000538792 EPB42P16452 691 aa8.66□□□□□ -1.02
GCSHP4-201ENST00000538792 TBC1D8BQ0IIM8 1120 aa8.66□□□□□ -1.02
GCSHP4-201ENST00000538792 C8orf86Q6ZUL3 223 aa8.66□□□□□ -1.02
GCSHP4-201ENST00000538792 KRT25Q7Z3Z0 450 aa8.66□□□□□ -1.02
GCSHP4-201ENST00000538792 TRIM11Q96F44 468 aa8.66□□□□□ -1.02
GCSHP4-201ENST00000538792 UBE2OQ9C0C9 1292 aaKnown RBP8.66□□□□□ -1.02
GCSHP4-201ENST00000538792 IGFLR1Q9H665 355 aa8.66□□□□□ -1.02
GCSHP4-201ENST00000538792 ARAP1Q96P48 1450 aa8.65□□□□□ -1.02
GCSHP4-201ENST00000538792 PTCD1O75127 700 aaKnown RBP8.65□□□□□ -1.02
GCSHP4-201ENST00000538792 TARSP26639 723 aaKnown RBP8.65□□□□□ -1.02
GCSHP4-201ENST00000538792 COL9A3Q14050 684 aaPredicted RBP8.65□□□□□ -1.02
GCSHP4-201ENST00000538792 RGL4Q8IZJ4 473 aa8.65□□□□□ -1.02
GCSHP4-201ENST00000538792 PNMA5Q96PV4 448 aa8.65□□□□□ -1.02
GCSHP4-201ENST00000538792 ERICH3Q5RHP9 1530 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 GRIN2AQ12879 1464 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 KRBA1A5PL33 1030 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 M0R082 166 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 SASH3O75995 380 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 BRD2P25440 801 aaKnown RBP8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 PLA2G4EQ3MJ16 856 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 MICALL1Q8N3F8 863 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 ZNF417Q8TAU3 575 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 ZNF587Q96SQ5 575 aaPredicted RBP8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 EFCC1Q9HA90 598 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 DNAJB12Q9NXW2 375 aaKnown RBP8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 SLC6A14Q9UN76 642 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 KCNMB2Q9Y691 235 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 CEP170Q5SW79 1584 aa8.64□□□□□ -1.03
GCSHP4-201ENST00000538792 NUP160Q12769 1436 aa8.63□□□□□ -1.03
GCSHP4-201ENST00000538792 ZBTB39O15060 712 aa8.63□□□□□ -1.03
GCSHP4-201ENST00000538792 GPAT2Q6NUI2 795 aa8.63□□□□□ -1.03
GCSHP4-201ENST00000538792 CMTR1Q8N1G2 835 aaKnown RBP8.63□□□□□ -1.03
GCSHP4-201ENST00000538792 NAGPAQ9UK23 515 aa8.63□□□□□ -1.03
GCSHP4-201ENST00000538792 FHAD1B1AJZ9 1412 aa8.63□□□□□ -1.03
GCSHP4-201ENST00000538792 ERCC6L2Q5T890 1561 aa8.62□□□□□ -1.03
GCSHP4-201ENST00000538792 CYB5RLQ6IPT4 315 aa8.62□□□□□ -1.03
GCSHP4-201ENST00000538792 ARID3AQ99856 593 aa8.62□□□□□ -1.03
GCSHP4-201ENST00000538792 PLVAPQ9BX97 442 aa8.62□□□□□ -1.03
GCSHP4-201ENST00000538792 ZBTB42B2RXF5 422 aa8.61□□□□□ -1.03
GCSHP4-201ENST00000538792 XYLBO75191 536 aa8.61□□□□□ -1.03
GCSHP4-201ENST00000538792 MAP3K6O95382 1288 aa8.61□□□□□ -1.03
GCSHP4-201ENST00000538792 EGFRP00533 1210 aa8.61□□□□□ -1.03
GCSHP4-201ENST00000538792 SSFA2P28290 1259 aa8.61□□□□□ -1.03
GCSHP4-201ENST00000538792 TRIP4Q15650 581 aaPredicted RBP8.61□□□□□ -1.03
GCSHP4-201ENST00000538792 C11orf16Q9NQ32 467 aa8.61□□□□□ -1.03
GCSHP4-201ENST00000538792 RUSC2Q8N2Y8 1516 aa8.6□□□□□ -1.03
GCSHP4-201ENST00000538792 RARAP10276 462 aa8.6□□□□□ -1.03
GCSHP4-201ENST00000538792 PHLDB3Q6NSJ2 640 aa8.6□□□□□ -1.03
GCSHP4-201ENST00000538792 DHX32Q7L7V1 743 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms