RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CHST3Q7LGC8 479 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 ZNF804AQ7Z570 1209 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 TMC6Q7Z403 805 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 VPS36Q86VN1 386 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
LINC00346-201ENST00000538077 KIF5CO60282 957 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 ORC3Q9UBD5 711 aaPredicted RBP12.89□□□□□ -0.35
LINC00346-201ENST00000538077 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 FGFR1OPO95684 399 aaKnown RBP12.89□□□□□ -0.35
LINC00346-201ENST00000538077 OGFOD1Q8N543 542 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 MAP2K1Q02750 393 aaPredicted RBP12.89□□□□□ -0.35
LINC00346-201ENST00000538077 IFFO1Q0D2I5 559 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 MPHOSPH6Q99547 160 aaKnown RBP12.89□□□□□ -0.35
LINC00346-201ENST00000538077 KLF18A0A0U1RQI7 1052 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 SFPQP23246 707 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC00346-201ENST00000538077 POLD1P28340 1107 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 KIF4BQ2VIQ3 1234 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 URI1O94763 535 aaPredicted RBP12.88□□□□□ -0.35
LINC00346-201ENST00000538077 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
LINC00346-201ENST00000538077 PKD2L1Q9P0L9 805 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 MAGEB6P1A0A0J9YX57 407 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 TBCAO75347 108 aaKnown RBP12.88□□□□□ -0.35
LINC00346-201ENST00000538077 LMAN1P49257 510 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 MAP3K9P80192 1104 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 NAA16Q6N069 864 aaPredicted RBP12.88□□□□□ -0.35
LINC00346-201ENST00000538077 NLRP3Q96P20 1036 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 SCAF11Q99590 1463 aaKnown RBP12.88□□□□□ -0.35
LINC00346-201ENST00000538077 CCDC91Q7Z6B0 441 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 EXOC1Q9NV70 894 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
LINC00346-201ENST00000538077 ABCC11Q96J66 1382 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 GJC1P36383 396 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 MAGEB6Q8N7X4 407 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 GOLGA6L10A0A0M3HER8 536 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 YEATS4O95619 227 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 AMPD3Q01432 767 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 BIN2Q9UBW5 565 aaPredicted RBP12.87□□□□□ -0.35
LINC00346-201ENST00000538077 RTCBQ9Y3I0 505 aaKnown RBP12.87□□□□□ -0.35
LINC00346-201ENST00000538077 TMEM110-MUSTN1A8MSY1 372 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 UQCRFS1P1P0C7P4 283 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 ATP2B3Q16720 1220 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 LMBR1LQ6UX01 489 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 SMARCC2Q8TAQ2 1214 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 MEIS3Q99687 375 aa12.87□□□□□ -0.35
LINC00346-201ENST00000538077 LMTK3Q96Q04 1460 aa12.86□□□□□ -0.35
LINC00346-201ENST00000538077 IGHDP01880 384 aa12.86□□□□□ -0.35
LINC00346-201ENST00000538077 C14orf93Q9H972 538 aaKnown RBP12.86□□□□□ -0.35
LINC00346-201ENST00000538077 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
LINC00346-201ENST00000538077 HMGN5P82970 282 aaKnown RBP12.86□□□□□ -0.35
LINC00346-201ENST00000538077 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
LINC00346-201ENST00000538077 GOLGA6L7A0A1B0GV03 622 aa12.86□□□□□ -0.35
LINC00346-201ENST00000538077 GNPATO15228 680 aa12.86□□□□□ -0.35
LINC00346-201ENST00000538077 NAPAP54920 295 aa12.86□□□□□ -0.35
LINC00346-201ENST00000538077 PTPN14Q15678 1187 aa12.86□□□□□ -0.35
LINC00346-201ENST00000538077 SCAND2PQ9GZW5 306 aaPredicted RBP12.86□□□□□ -0.35
LINC00346-201ENST00000538077 UBA7P41226 1012 aa12.86□□□□□ -0.35
LINC00346-201ENST00000538077 PHACTR2O75167 634 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 IL2RBP14784 551 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 RXRAP19793 462 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 TTC22Q5TAA0 569 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 SLC9C2Q5TAH2 1124 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 ZBTB9Q96C00 473 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 PRKG1Q13976 671 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 RRAGBQ5VZM2 374 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 CCDC174Q6PII3 467 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 PLIN2Q99541 437 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 USP25Q9UHP3 1055 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00346-201ENST00000538077 STAT6P42226 847 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 MRPS9P82933 396 aaKnown RBP12.85□□□□□ -0.35
LINC00346-201ENST00000538077 Q6ZUG5 572 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 DHX29Q7Z478 1369 aaKnown RBP12.85□□□□□ -0.35
LINC00346-201ENST00000538077 STX6O43752 255 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 HOOK3Q86VS8 718 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 BRF1Q92994 677 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 ZSCAN12O43309 604 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 MCM5P33992 734 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 CETN1Q12798 172 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 CWF19L2Q2TBE0 894 aaKnown RBP12.85□□□□□ -0.35
LINC00346-201ENST00000538077 TRIM47Q96LD4 638 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 MRVI1Q9Y6F6 885 aa12.85□□□□□ -0.35
LINC00346-201ENST00000538077 KDM5BQ9UGL1 1544 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 RHPN1Q8TCX5 695 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 UBXN4Q92575 508 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
LINC00346-201ENST00000538077 ZKSCAN3Q9BRR0 538 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 CRACR2AQ9BSW2 395 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
LINC00346-201ENST00000538077 MARCKSP29966 332 aaPredicted RBP12.84□□□□□ -0.35
LINC00346-201ENST00000538077 ALG1Q9BT22 464 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 KIAA0556O60303 1618 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 KRT23Q9C075 422 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 RTN1Q16799 776 aa12.84□□□□□ -0.35
LINC00346-201ENST00000538077 MTHFSDQ2M296 383 aaKnown RBP12.84□□□□□ -0.35
LINC00346-201ENST00000538077 NYXQ9GZU5 481 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms