RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 TMC6Q7Z403 805 aa18.65■□□□□ 0.58
MCF2L-232ENST00000535094 SUCLG2Q96I99 432 aa18.65■□□□□ 0.58
MCF2L-232ENST00000535094 GTPBP4Q9BZE4 634 aaKnown RBP18.65■□□□□ 0.58
MCF2L-232ENST00000535094 CLSTN2Q9H4D0 955 aa18.65■□□□□ 0.58
MCF2L-232ENST00000535094 ZNF215Q9UL58 517 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-232ENST00000535094 ROBO2Q9HCK4 1378 aa18.65■□□□□ 0.58
MCF2L-232ENST00000535094 GRM8O00222 908 aa18.64■□□□□ 0.58
MCF2L-232ENST00000535094 HAND2P61296 217 aa18.64■□□□□ 0.58
MCF2L-232ENST00000535094 CREBRFQ8IUR6 639 aa18.64■□□□□ 0.58
MCF2L-232ENST00000535094 ELF2Q15723 593 aa18.64■□□□□ 0.57
MCF2L-232ENST00000535094 PDILTQ8N807 584 aa18.64■□□□□ 0.57
MCF2L-232ENST00000535094 MNS1Q8NEH6 495 aa18.64■□□□□ 0.57
MCF2L-232ENST00000535094 HECW2Q9P2P5 1572 aa18.64■□□□□ 0.57
MCF2L-232ENST00000535094 EIF4A1P60842 406 aaKnown RBP18.64■□□□□ 0.57
MCF2L-232ENST00000535094 NCBP1Q09161 790 aaKnown RBP18.63■□□□□ 0.57
MCF2L-232ENST00000535094 CCDC144BQ3MJ40 725 aa18.63■□□□□ 0.57
MCF2L-232ENST00000535094 SYNE3Q6ZMZ3 975 aa18.63■□□□□ 0.57
MCF2L-232ENST00000535094 CCDC144CPQ8IYA2 1237 aa18.63■□□□□ 0.57
MCF2L-232ENST00000535094 NAT10Q9H0A0 1025 aaKnown RBP18.63■□□□□ 0.57
MCF2L-232ENST00000535094 POLR3GO15318 223 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-232ENST00000535094 UBE3BQ7Z3V4 1068 aa18.63■□□□□ 0.57
MCF2L-232ENST00000535094 SETD1BQ9UPS6 1966 aaKnown RBP18.63■□□□□ 0.57
MCF2L-232ENST00000535094 PIK3C2BO00750 1634 aa18.63■□□□□ 0.57
MCF2L-232ENST00000535094 A0A1B0GVL5 298 aa18.63■□□□□ 0.57
MCF2L-232ENST00000535094 PAXBP1Q9Y5B6 917 aa18.63■□□□□ 0.57
MCF2L-232ENST00000535094 GOLIM4O00461 696 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 STX1AQ16623 288 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 C11orf57Q6ZUT1 292 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-232ENST00000535094 FKBP4Q02790 459 aaKnown RBP eCLIP18.62■□□□□ 0.571e-6■■■■□ 21.9
MCF2L-232ENST00000535094 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 USP27XA6NNY8 438 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 ATP2B1P20020 1258 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 LTKP29376 864 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 NECTIN1Q15223 517 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 SLFNL1Q499Z3 407 aa18.62■□□□□ 0.57
MCF2L-232ENST00000535094 POLA2Q14181 598 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 KSR2Q6VAB6 950 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 SNRKQ9NRH2 765 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 ANO10Q9NW15 660 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 ZNF396Q96N95 335 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-232ENST00000535094 OGFRQ9NZT2 677 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 SBNO1A3KN83 1393 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 IFT172Q9UG01 1749 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 KRT32Q14532 448 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 PTPN21Q16825 1174 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 GTF3C6Q969F1 213 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 NEURL4Q96JN8 1562 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 KNDC1Q76NI1 1749 aa18.61■□□□□ 0.57
MCF2L-232ENST00000535094 PLEKHG3A1L390 1219 aa18.6■□□□□ 0.57
MCF2L-232ENST00000535094 SFPQP23246 707 aaKnown RBP eCLIP18.6■□□□□ 0.57
MCF2L-232ENST00000535094 LMOD1P29536 600 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-232ENST00000535094 PGBD1Q96JS3 809 aa18.6■□□□□ 0.57
MCF2L-232ENST00000535094 SERPINC1P01008 464 aa18.6■□□□□ 0.57
MCF2L-232ENST00000535094 APPP05067 770 aa18.6■□□□□ 0.57
MCF2L-232ENST00000535094 SNW1Q13573 536 aaKnown RBP18.6■□□□□ 0.57
MCF2L-232ENST00000535094 SYT10Q6XYQ8 523 aa18.6■□□□□ 0.57
MCF2L-232ENST00000535094 TM6SF1Q9BZW5 370 aa18.6■□□□□ 0.57
MCF2L-232ENST00000535094 MAP4K1Q92918 833 aa18.6■□□□□ 0.57
MCF2L-232ENST00000535094 ZC3H6P61129 1189 aaKnown RBP18.59■□□□□ 0.57
MCF2L-232ENST00000535094 FRMPD1Q5SYB0 1578 aa18.59■□□□□ 0.57
MCF2L-232ENST00000535094 URI1O94763 535 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-232ENST00000535094 FUCA2Q9BTY2 467 aa18.59■□□□□ 0.57
MCF2L-232ENST00000535094 TOMM22Q9NS69 142 aa18.59■□□□□ 0.57
MCF2L-232ENST00000535094 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
MCF2L-232ENST00000535094 TTC5Q8N0Z6 440 aa18.59■□□□□ 0.57
MCF2L-232ENST00000535094 ARHGEF10O15013 1369 aa18.58■□□□□ 0.57
MCF2L-232ENST00000535094 PTPDC1A2A3K4 754 aa18.58■□□□□ 0.57
MCF2L-232ENST00000535094 TFCP2Q12800 502 aa18.58■□□□□ 0.57
MCF2L-232ENST00000535094 HSP90AB3PQ58FF7 597 aa18.58■□□□□ 0.57
MCF2L-232ENST00000535094 COPS6Q7L5N1 327 aa18.58■□□□□ 0.57
MCF2L-232ENST00000535094 KRT222Q8N1A0 295 aa18.58■□□□□ 0.57
MCF2L-232ENST00000535094 IFNKQ9P0W0 207 aa18.58■□□□□ 0.57
MCF2L-232ENST00000535094 ST3GAL1Q11201 340 aa18.58■□□□□ 0.56
MCF2L-232ENST00000535094 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.56
MCF2L-232ENST00000535094 SASH1O94885 1247 aa18.58■□□□□ 0.56
MCF2L-232ENST00000535094 TAF7LQ5H9L4 462 aa18.58■□□□□ 0.56
MCF2L-232ENST00000535094 LRRC8AQ8IWT6 810 aa18.57■□□□□ 0.56
MCF2L-232ENST00000535094 USP28Q96RU2 1077 aa18.57■□□□□ 0.56
MCF2L-232ENST00000535094 FEZ1Q99689 392 aa18.57■□□□□ 0.56
MCF2L-232ENST00000535094 DBNDD2Q9BQY9 259 aa18.57■□□□□ 0.56
MCF2L-232ENST00000535094 CFAP100Q494V2 611 aa18.57■□□□□ 0.56
MCF2L-232ENST00000535094 TTC21AQ8NDW8 1320 aa18.57■□□□□ 0.56
MCF2L-232ENST00000535094 MARCKSP29966 332 aaPredicted RBP18.57■□□□□ 0.56
MCF2L-232ENST00000535094 TTLL5Q6EMB2 1281 aa18.57■□□□□ 0.56
MCF2L-232ENST00000535094 DNAI1Q9UI46 699 aa18.57■□□□□ 0.56
MCF2L-232ENST00000535094 REREQ9P2R6 1566 aa18.56■□□□□ 0.56
MCF2L-232ENST00000535094 LINS1Q8NG48 757 aa18.56■□□□□ 0.56
MCF2L-232ENST00000535094 UBXN4Q92575 508 aa18.56■□□□□ 0.56
MCF2L-232ENST00000535094 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-232ENST00000535094 A0A087WZG4 1122 aa18.56■□□□□ 0.56
MCF2L-232ENST00000535094 GTF2F1P35269 517 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■■■■□ 22.9
MCF2L-232ENST00000535094 TOB2Q14106 344 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-232ENST00000535094 ZSWIM4Q9H7M6 989 aa18.56■□□□□ 0.56
MCF2L-232ENST00000535094 KIF20AO95235 890 aa18.55■□□□□ 0.56
MCF2L-232ENST00000535094 ERCC6LQ2NKX8 1250 aa18.55■□□□□ 0.56
MCF2L-232ENST00000535094 ZFP91Q96JP5 570 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-232ENST00000535094 ARHGAP31Q2M1Z3 1444 aa18.55■□□□□ 0.56
MCF2L-232ENST00000535094 RALYLQ86SE5 291 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms