RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 CKAP2LQ8IYA6 745 aa5.18□□□□□ -1.58
ME3-211ENST00000534638 NUDT16Q96DE0 195 aaKnown RBP5.18□□□□□ -1.58
ME3-211ENST00000534638 OSBPL7Q9BZF2 842 aa5.18□□□□□ -1.58
ME3-211ENST00000534638 GGNBP2Q9H3C7 697 aa5.18□□□□□ -1.58
ME3-211ENST00000534638 C12orf49Q9H741 205 aa5.18□□□□□ -1.58
ME3-211ENST00000534638 ARHGEF10LQ9HCE6 1279 aa5.18□□□□□ -1.58
ME3-211ENST00000534638 HCN4Q9Y3Q4 1203 aa5.18□□□□□ -1.58
ME3-211ENST00000534638 MRVI1Q9Y6F6 885 aa5.18□□□□□ -1.58
ME3-211ENST00000534638 H3BM21 787 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 MEN1O00255 615 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 PPFIA3O75145 1194 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 PARNO95453 639 aaKnown RBP5.17□□□□□ -1.58
ME3-211ENST00000534638 USP17L7P0C7H9 530 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 XRCC5P13010 732 aaKnown RBP5.17□□□□□ -1.58
ME3-211ENST00000534638 USP5P45974 858 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 SMTNP53814 917 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 SERINC3Q13530 473 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 NFE2L2Q16236 605 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 RNF187Q5TA31 235 aaPredicted RBP5.17□□□□□ -1.58
ME3-211ENST00000534638 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 FAM9AQ8IZU1 332 aaPredicted RBP5.17□□□□□ -1.58
ME3-211ENST00000534638 RNF217Q8TC41 542 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 EPS8L3Q8TE67 593 aaKnown RBP5.17□□□□□ -1.58
ME3-211ENST00000534638 ZNF526Q8TF50 670 aaPredicted RBP5.17□□□□□ -1.58
ME3-211ENST00000534638 SLC4A9Q96Q91 983 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 ZNF408Q9H9D4 720 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 IFT57Q9NWB7 429 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 SLC52A1Q9NWF4 448 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 FOXD3Q9UJU5 478 aaPredicted RBP5.17□□□□□ -1.58
ME3-211ENST00000534638 NOP58Q9Y2X3 529 aaKnown RBP5.17□□□□□ -1.58
ME3-211ENST00000534638 SUGT1Q9Y2Z0 365 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 PARP3Q9Y6F1 533 aa5.17□□□□□ -1.58
ME3-211ENST00000534638 CCDC85CA6NKD9 419 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 EML1O00423 815 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 SSBP05455 408 aaKnown RBP eCLIP5.16□□□□□ -1.58
ME3-211ENST00000534638 RNF144AP50876 292 aaPredicted RBP5.16□□□□□ -1.58
ME3-211ENST00000534638 PTSQ03393 145 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 ALDH16A1Q8IZ83 802 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 STAG2Q8N3U4 1231 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 ZDHHC1Q8WTX9 485 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 IFT43Q96FT9 208 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 NLRP3Q96P20 1036 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 SRPK1Q96SB4 655 aaKnown RBP5.16□□□□□ -1.58
ME3-211ENST00000534638 METTL14Q9HCE5 456 aaKnown RBP5.16□□□□□ -1.58
ME3-211ENST00000534638 ZNF232Q9UNY5 417 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 CHMP3Q9Y3E7 222 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 USP31Q70CQ4 1352 aa5.16□□□□□ -1.58
ME3-211ENST00000534638 CPNE3O75131 537 aaKnown RBP5.15□□□□□ -1.59
ME3-211ENST00000534638 CLSTN1O94985 981 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 GNRH1P01148 92 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 IL2RAP01589 272 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 NASPP49321 788 aaPredicted RBP5.15□□□□□ -1.59
ME3-211ENST00000534638 CLN3Q13286 438 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 MTFR1Q15390 333 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 TLR1Q15399 786 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 TAF1CQ15572 869 aaPredicted RBP5.15□□□□□ -1.59
ME3-211ENST00000534638 C11orf91Q3C1V1 193 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 LYSMD3Q7Z3D4 306 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 PRICKLE2Q7Z3G6 844 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 TREML1Q86YW5 311 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 IRF7Q92985 503 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 RNPC3Q96LT9 517 aaKnown RBP5.15□□□□□ -1.59
ME3-211ENST00000534638 FRMD6Q96NE9 622 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 KANSL2Q9H9L4 492 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 PCDH12Q9NPG4 1184 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 KBTBD4Q9NVX7 518 aa5.15□□□□□ -1.59
ME3-211ENST00000534638 SERTM1A2A2V5 107 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 SLC35F4A4IF30 521 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 RHOQP17081 205 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 GPC1P35052 558 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 ETFBP38117 255 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 RTN1Q16799 776 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 SLC27A3Q5K4L6 730 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 ANKS3Q6ZW76 656 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 ERMP1Q7Z2K6 904 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 CCDC155Q8N6L0 562 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 ZCRB1Q8TBF4 217 aaKnown RBP5.14□□□□□ -1.59
ME3-211ENST00000534638 HNRNPLLQ8WVV9 542 aaKnown RBP5.14□□□□□ -1.59
ME3-211ENST00000534638 CCDC74AQ96AQ1 378 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 PHACTR1Q9C0D0 580 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 G3BP2Q9UN86 482 aaKnown RBP5.14□□□□□ -1.59
ME3-211ENST00000534638 ERBB4Q15303 1308 aa5.14□□□□□ -1.59
ME3-211ENST00000534638 FAM221BA6H8Z2 402 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 ENPP3O14638 875 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 POLR3DP05423 398 aaPredicted RBP5.13□□□□□ -1.59
ME3-211ENST00000534638 PCSK2P16519 638 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 NOS2P35228 1153 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 GMPRP36959 345 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 PLEKHG6Q3KR16 790 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 ESCO1Q5FWF5 840 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 NXPE4Q6UWF7 544 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 RPUSD2Q8IZ73 545 aaKnown RBP5.13□□□□□ -1.59
ME3-211ENST00000534638 TTC16Q8NEE8 873 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 CNKSR1Q969H4 720 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 ESYT1Q9BSJ8 1104 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 SPON2Q9BUD6 331 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 TRIM55Q9BYV6 548 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 GRIP2Q9C0E4 1043 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 DNAJC25Q9H1X3 360 aa5.13□□□□□ -1.59
ME3-211ENST00000534638 NPHS2Q9NP85 383 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms