RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 AEBP2Q6ZN18 517 aaPredicted RBP14.6□□□□□ -0.07
ME3-211ENST00000534638 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
ME3-211ENST00000534638 PHF23Q9BUL5 403 aaPredicted RBP12.43□□□□□ -0.42
ME3-211ENST00000534638 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
ME3-211ENST00000534638 FOXD1Q16676 465 aa11.54□□□□□ -0.56
ME3-211ENST00000534638 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
ME3-211ENST00000534638 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
ME3-211ENST00000534638 ADRA2BP18089 450 aa11□□□□□ -0.65
ME3-211ENST00000534638 PIAS4Q8N2W9 510 aaPredicted RBP10.86□□□□□ -0.67
ME3-211ENST00000534638 MSH5O43196 834 aa10.68□□□□□ -0.7
ME3-211ENST00000534638 POTEDQ86YR6 584 aa10.68□□□□□ -0.7
ME3-211ENST00000534638 PPP4R3CPQ6ZMV5 832 aa10.07□□□□□ -0.8
ME3-211ENST00000534638 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
ME3-211ENST00000534638 MAPK8IP2Q13387 824 aaPredicted RBP10.02□□□□□ -0.81
ME3-211ENST00000534638 DMRT2Q9Y5R5 561 aa9.89□□□□□ -0.83
ME3-211ENST00000534638 CNKSR2Q8WXI2 1034 aa9.8□□□□□ -0.84
ME3-211ENST00000534638 NCBP3Q53F19 620 aaKnown RBP9.76□□□□□ -0.85
ME3-211ENST00000534638 KCNA4P22459 653 aa9.69□□□□□ -0.86
ME3-211ENST00000534638 RNF216Q9NWF9 866 aaPredicted RBP9.64□□□□□ -0.87
ME3-211ENST00000534638 HOXD11P31277 338 aaPredicted RBP9.63□□□□□ -0.87
ME3-211ENST00000534638 NPM3O75607 178 aaKnown RBP9.62□□□□□ -0.87
ME3-211ENST00000534638 EHMT2Q96KQ7 1210 aa9.53□□□□□ -0.88
ME3-211ENST00000534638 DCAF8L1A6NGE4 600 aa9.49□□□□□ -0.89
ME3-211ENST00000534638 DNAJC5BQ9UF47 199 aa9.32□□□□□ -0.92
ME3-211ENST00000534638 SLC4A1APQ9BWU0 796 aaKnown RBP9.21□□□□□ -0.94
ME3-211ENST00000534638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.2□□□□□ -0.94
ME3-211ENST00000534638 RNF39Q9H2S5 420 aa9.14□□□□□ -0.95
ME3-211ENST00000534638 SLC4A2P04920 1241 aa9.11□□□□□ -0.95
ME3-211ENST00000534638 CACNB1Q02641 598 aaPredicted RBP9.03□□□□□ -0.96
ME3-211ENST00000534638 CSRNP3Q8WYN3 585 aa9.03□□□□□ -0.96
ME3-211ENST00000534638 C1QBPQ07021 282 aaKnown RBP9.02□□□□□ -0.97
ME3-211ENST00000534638 U3KPZ7 1027 aaPredicted RBP9.02□□□□□ -0.97
ME3-211ENST00000534638 FOXD4L1Q9NU39 408 aa8.95□□□□□ -0.98
ME3-211ENST00000534638 ZBTB22O15209 634 aa8.9□□□□□ -0.98
ME3-211ENST00000534638 MYCNP04198 464 aaPredicted RBP8.89□□□□□ -0.99
ME3-211ENST00000534638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.86□□□□□ -0.99
ME3-211ENST00000534638 HNRNPUL2Q1KMD3 747 aaKnown RBP8.86□□□□□ -0.99
ME3-211ENST00000534638 SAMD1Q6SPF0 538 aaPredicted RBP8.83□□□□□ -1
ME3-211ENST00000534638 SPINK5Q9NQ38 1064 aaPredicted RBP8.81□□□□□ -1
ME3-211ENST00000534638 APLP2Q06481 763 aa8.8□□□□□ -1
ME3-211ENST00000534638 CAPN15O75808 1086 aa8.79□□□□□ -1
ME3-211ENST00000534638 SLC24A1O60721 1099 aa8.76□□□□□ -1.01
ME3-211ENST00000534638 TRHP20396 242 aaPredicted RBP8.73□□□□□ -1.01
ME3-211ENST00000534638 ZNF219Q9P2Y4 722 aaPredicted RBP8.69□□□□□ -1.02
ME3-211ENST00000534638 DSG3P32926 999 aa8.66□□□□□ -1.02
ME3-211ENST00000534638 ATF5Q9Y2D1 282 aaPredicted RBP8.66□□□□□ -1.02
ME3-211ENST00000534638 ATXN8OSP0DMR3 200 aa8.64□□□□□ -1.03
ME3-211ENST00000534638 ABCB7O75027 752 aa8.62□□□□□ -1.03
ME3-211ENST00000534638 RTN4Q9NQC3 1192 aaKnown RBP8.59□□□□□ -1.03
ME3-211ENST00000534638 POLA2Q14181 598 aa8.55□□□□□ -1.04
ME3-211ENST00000534638 AMER1Q5JTC6 1135 aaPredicted RBP8.46□□□□□ -1.06
ME3-211ENST00000534638 ZBTB12Q9Y330 459 aaPredicted RBP8.39□□□□□ -1.07
ME3-211ENST00000534638 FBLN2P98095 1184 aa8.32□□□□□ -1.08
ME3-211ENST00000534638 POTEHQ6S545 545 aa8.31□□□□□ -1.08
ME3-211ENST00000534638 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
ME3-211ENST00000534638 OSCARQ8IYS5 282 aa8.26□□□□□ -1.09
ME3-211ENST00000534638 RBM42Q9BTD8 480 aaKnown RBP8.26□□□□□ -1.09
ME3-211ENST00000534638 SPDYE2BA6NHP3 402 aa8.15□□□□□ -1.1
ME3-211ENST00000534638 SPDYE6P0CI01 402 aa8.15□□□□□ -1.1
ME3-211ENST00000534638 FKBP8Q14318 412 aa8.15□□□□□ -1.1
ME3-211ENST00000534638 SPDYE2Q495Y8 402 aa8.15□□□□□ -1.1
ME3-211ENST00000534638 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
ME3-211ENST00000534638 ZNF692Q9BU19 519 aaPredicted RBP8.11□□□□□ -1.11
ME3-211ENST00000534638 SSUH2Q9Y2M2 353 aa8.07□□□□□ -1.12
ME3-211ENST00000534638 REM2Q8IYK8 340 aaPredicted RBP8.05□□□□□ -1.12
ME3-211ENST00000534638 SPDYE4A6NLX3 237 aa8.04□□□□□ -1.12
ME3-211ENST00000534638 PABPN1Q86U42 306 aaKnown RBP eCLIP8□□□□□ -1.13
ME3-211ENST00000534638 PITPNM1O00562 1244 aa7.96□□□□□ -1.14
ME3-211ENST00000534638 CHRDL2Q6WN34 429 aa7.96□□□□□ -1.14
ME3-211ENST00000534638 SPDYE1Q8NFV5 336 aaPredicted RBP7.95□□□□□ -1.14
ME3-211ENST00000534638 CLEC11AQ9Y240 323 aa7.94□□□□□ -1.14
ME3-211ENST00000534638 PROM2Q8N271 834 aa7.86□□□□□ -1.15
ME3-211ENST00000534638 PRR29P0C7W0 189 aa7.84□□□□□ -1.15
ME3-211ENST00000534638 PRKCSHP14314 528 aaPredicted RBP7.84□□□□□ -1.15
ME3-211ENST00000534638 PIP4P2Q8N4L2 257 aa7.84□□□□□ -1.15
ME3-211ENST00000534638 STAG3Q9UJ98 1225 aa7.84□□□□□ -1.15
ME3-211ENST00000534638 FXR2P51116 673 aaKnown RBP eCLIP7.83□□□□□ -1.16
ME3-211ENST00000534638 PLCB2Q00722 1185 aa7.81□□□□□ -1.16
ME3-211ENST00000534638 HAP1P54257 671 aaPredicted RBP7.78□□□□□ -1.16
ME3-211ENST00000534638 PRKAR2AP13861 404 aaKnown RBP7.77□□□□□ -1.17
ME3-211ENST00000534638 CHADLQ6NUI6 762 aa7.74□□□□□ -1.17
ME3-211ENST00000534638 CREBZFQ9NS37 354 aa7.7□□□□□ -1.18
ME3-211ENST00000534638 DCAF8L2P0C7V8 631 aa7.69□□□□□ -1.18
ME3-211ENST00000534638 BCANQ96GW7 911 aa7.69□□□□□ -1.18
ME3-211ENST00000534638 FBXO3Q9UK99 471 aa7.68□□□□□ -1.18
ME3-211ENST00000534638 TAOK2Q9UL54 1235 aa7.68□□□□□ -1.18
ME3-211ENST00000534638 FARP1Q9Y4F1 1045 aaPredicted RBP7.66□□□□□ -1.18
ME3-211ENST00000534638 MIER1Q8N108 512 aa7.65□□□□□ -1.18
ME3-211ENST00000534638 HAX1O00165 279 aa7.63□□□□□ -1.19
ME3-211ENST00000534638 PLCD3Q8N3E9 789 aa7.62□□□□□ -1.19
ME3-211ENST00000534638 PLEKHG5O94827 1062 aa7.61□□□□□ -1.19
ME3-211ENST00000534638 TPRNQ4KMQ1 711 aa7.61□□□□□ -1.19
ME3-211ENST00000534638 SP7Q8TDD2 431 aaPredicted RBP7.61□□□□□ -1.19
ME3-211ENST00000534638 MNX1P50219 401 aaPredicted RBP7.59□□□□□ -1.19
ME3-211ENST00000534638 VASPP50552 380 aaPredicted RBP7.58□□□□□ -1.2
ME3-211ENST00000534638 C19orf67A6NJJ6 358 aa7.57□□□□□ -1.2
ME3-211ENST00000534638 NPM1P06748 294 aaKnown RBP eCLIP7.57□□□□□ -1.2
ME3-211ENST00000534638 EVX2Q03828 476 aa7.55□□□□□ -1.2
ME3-211ENST00000534638 VSIG10Q8N0Z9 540 aa7.54□□□□□ -1.2
ME3-211ENST00000534638 CD44P16070 742 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms