RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 SLC52A2Q9HAB3 445 aa20.54■□□□□ 0.88
SIPA1-209ENST00000534313 KDM4AO75164 1064 aa20.54■□□□□ 0.88
SIPA1-209ENST00000534313 RPS6KB1P23443 525 aa20.54■□□□□ 0.88
SIPA1-209ENST00000534313 ANKRD13DQ6ZTN6 518 aa20.54■□□□□ 0.88
SIPA1-209ENST00000534313 ERBB3P21860 1342 aa20.54■□□□□ 0.88
SIPA1-209ENST00000534313 RNF20Q5VTR2 975 aa20.53■□□□□ 0.88
SIPA1-209ENST00000534313 DBNDD2Q9BQY9 259 aa20.53■□□□□ 0.88
SIPA1-209ENST00000534313 HIP1O00291 1037 aa20.53■□□□□ 0.88
SIPA1-209ENST00000534313 KRT85P78386 507 aa20.53■□□□□ 0.88
SIPA1-209ENST00000534313 UVSSAQ2YD98 709 aa20.53■□□□□ 0.88
SIPA1-209ENST00000534313 FUCA2Q9BTY2 467 aa20.53■□□□□ 0.88
SIPA1-209ENST00000534313 LETM1O95202 739 aaPredicted RBP20.52■□□□□ 0.88
SIPA1-209ENST00000534313 HSP90B1P14625 803 aaKnown RBP20.52■□□□□ 0.88
SIPA1-209ENST00000534313 UTYO14607 1347 aa20.52■□□□□ 0.88
SIPA1-209ENST00000534313 LMO7Q8WWI1 1683 aa20.52■□□□□ 0.88
SIPA1-209ENST00000534313 CEBPZQ03701 1054 aaKnown RBP20.52■□□□□ 0.88
SIPA1-209ENST00000534313 PROSER2Q86WR7 435 aaPredicted RBP20.52■□□□□ 0.88
SIPA1-209ENST00000534313 METTL22Q9BUU2 404 aaPredicted RBP20.52■□□□□ 0.88
SIPA1-209ENST00000534313 NPHP3Q7Z494 1330 aa20.52■□□□□ 0.88
SIPA1-209ENST00000534313 TAF5LO75529 589 aa20.52■□□□□ 0.87
SIPA1-209ENST00000534313 COL15A1P39059 1388 aa20.51■□□□□ 0.87
SIPA1-209ENST00000534313 NPHP4O75161 1426 aaPredicted RBP20.51■□□□□ 0.87
SIPA1-209ENST00000534313 GOLGA6L4A6NEF3 574 aa20.51■□□□□ 0.87
SIPA1-209ENST00000534313 TNNI3KQ59H18 835 aa20.51■□□□□ 0.87
SIPA1-209ENST00000534313 TTC5Q8N0Z6 440 aa20.51■□□□□ 0.87
SIPA1-209ENST00000534313 FPGT-TNNI3KV9GXZ4 949 aa20.51■□□□□ 0.87
SIPA1-209ENST00000534313 A0A087WZG4 1122 aa20.5■□□□□ 0.87
SIPA1-209ENST00000534313 PTPN12Q05209 780 aaKnown RBP20.5■□□□□ 0.87
SIPA1-209ENST00000534313 DACT1Q9NYF0 836 aa20.5■□□□□ 0.87
SIPA1-209ENST00000534313 USP54Q70EL1 1684 aa20.5■□□□□ 0.87
SIPA1-209ENST00000534313 PHKG2P15735 406 aa20.5■□□□□ 0.87
SIPA1-209ENST00000534313 NCAPD2Q15021 1401 aa20.5■□□□□ 0.87
SIPA1-209ENST00000534313 TATP17735 454 aaPredicted RBP20.5■□□□□ 0.87
SIPA1-209ENST00000534313 CBX1P83916 185 aa20.5■□□□□ 0.87
SIPA1-209ENST00000534313 NOLC1Q14978 699 aaKnown RBP eCLIP20.5■□□□□ 0.87
SIPA1-209ENST00000534313 LUZP1Q86V48 1076 aa20.5■□□□□ 0.87
SIPA1-209ENST00000534313 PODXL2Q9NZ53 605 aa20.5■□□□□ 0.87
SIPA1-209ENST00000534313 CRYBG1Q9Y4K1 1723 aa20.49■□□□□ 0.87
SIPA1-209ENST00000534313 SASS6Q6UVJ0 657 aa20.49■□□□□ 0.87
SIPA1-209ENST00000534313 NEUROD6Q96NK8 337 aa20.49■□□□□ 0.87
SIPA1-209ENST00000534313 FGD1P98174 961 aa20.49■□□□□ 0.87
SIPA1-209ENST00000534313 SPATA32Q96LK8 384 aa20.49■□□□□ 0.87
SIPA1-209ENST00000534313 NAP1L2Q9ULW6 460 aaPredicted RBP20.49■□□□□ 0.87
SIPA1-209ENST00000534313 MED23Q9ULK4 1368 aa20.49■□□□□ 0.87
SIPA1-209ENST00000534313 NUP62CLQ9H1M0 184 aa20.49■□□□□ 0.87
SIPA1-209ENST00000534313 Q6ZUG5 572 aa20.48■□□□□ 0.87
SIPA1-209ENST00000534313 KDM6AO15550 1401 aaPredicted RBP20.48■□□□□ 0.87
SIPA1-209ENST00000534313 CCDC192P0DO97 292 aa20.48■□□□□ 0.87
SIPA1-209ENST00000534313 NEK1Q96PY6 1258 aa20.47■□□□□ 0.87
SIPA1-209ENST00000534313 A0A0G2JLW4 131 aa20.47■□□□□ 0.87
SIPA1-209ENST00000534313 RFX5P48382 616 aaPredicted RBP20.47■□□□□ 0.87
SIPA1-209ENST00000534313 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
SIPA1-209ENST00000534313 CHD2O14647 1828 aaKnown RBP20.47■□□□□ 0.87
SIPA1-209ENST00000534313 MAP3K11Q16584 847 aa20.47■□□□□ 0.87
SIPA1-209ENST00000534313 PIBF1Q8WXW3 757 aa20.47■□□□□ 0.87
SIPA1-209ENST00000534313 BRF1Q92994 677 aa20.47■□□□□ 0.87
SIPA1-209ENST00000534313 CYP21A2P08686 494 aa20.46■□□□□ 0.87
SIPA1-209ENST00000534313 TERF1P54274 439 aa20.46■□□□□ 0.87
SIPA1-209ENST00000534313 ANKRD1Q15327 319 aa20.46■□□□□ 0.87
SIPA1-209ENST00000534313 BICD2Q8TD16 824 aa20.46■□□□□ 0.87
SIPA1-209ENST00000534313 TNMDQ9H2S6 317 aa20.46■□□□□ 0.87
SIPA1-209ENST00000534313 PYCARDQ9ULZ3 195 aa20.46■□□□□ 0.87
SIPA1-209ENST00000534313 CYP27B1O15528 508 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 SNRPA1P09661 255 aaKnown RBP20.45■□□□□ 0.86
SIPA1-209ENST00000534313 PDCP20941 246 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 TIMM10P62072 90 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 TYRO3Q06418 890 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 DYNC1I1O14576 645 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 COPRSQ9NQ92 184 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 ATP5JP18859 108 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 CHAF1AQ13111 956 aaPredicted RBP20.45■□□□□ 0.86
SIPA1-209ENST00000534313 CHST3Q7LGC8 479 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 LEO1Q8WVC0 666 aaPredicted RBP20.45■□□□□ 0.86
SIPA1-209ENST00000534313 KCNF1Q9H3M0 494 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 MRVI1Q9Y6F6 885 aa20.45■□□□□ 0.86
SIPA1-209ENST00000534313 ZNF609O15014 1411 aa20.44■□□□□ 0.86
SIPA1-209ENST00000534313 H3BQV1 296 aa20.44■□□□□ 0.86
SIPA1-209ENST00000534313 GOLIM4O00461 696 aa20.44■□□□□ 0.86
SIPA1-209ENST00000534313 IFFO2Q5TF58 517 aa20.44■□□□□ 0.86
SIPA1-209ENST00000534313 IFNL2Q8IZJ0 200 aa20.44■□□□□ 0.86
SIPA1-209ENST00000534313 FTOQ9C0B1 505 aaKnown RBP eCLIP20.44■□□□□ 0.86
SIPA1-209ENST00000534313 NR1I2O75469 434 aa20.44■□□□□ 0.86
SIPA1-209ENST00000534313 ANO6Q4KMQ2 910 aa20.44■□□□□ 0.86
SIPA1-209ENST00000534313 LRP10Q7Z4F1 713 aa20.44■□□□□ 0.86
SIPA1-209ENST00000534313 CCT2P78371 535 aaKnown RBP20.43■□□□□ 0.86
SIPA1-209ENST00000534313 MTERF4Q7Z6M4 381 aaKnown RBP20.43■□□□□ 0.86
SIPA1-209ENST00000534313 SNRKQ9NRH2 765 aa20.43■□□□□ 0.86
SIPA1-209ENST00000534313 STOX1Q6ZVD7 989 aa20.43■□□□□ 0.86
SIPA1-209ENST00000534313 ZNF594Q96JF6 807 aaPredicted RBP20.43■□□□□ 0.86
SIPA1-209ENST00000534313 PGBD1Q96JS3 809 aa20.43■□□□□ 0.86
SIPA1-209ENST00000534313 CABP4P57796 275 aa20.43■□□□□ 0.86
SIPA1-209ENST00000534313 HMG20BQ9P0W2 317 aa20.43■□□□□ 0.86
SIPA1-209ENST00000534313 MEGF6O75095 1541 aa20.42■□□□□ 0.86
SIPA1-209ENST00000534313 RGPD5Q99666 1765 aa20.42■□□□□ 0.86
SIPA1-209ENST00000534313 A0A087WWV3 80 aa20.42■□□□□ 0.86
SIPA1-209ENST00000534313 GUCY1B3Q02153 619 aa20.42■□□□□ 0.86
SIPA1-209ENST00000534313 GTF3C6Q969F1 213 aa20.42■□□□□ 0.86
SIPA1-209ENST00000534313 ZNF330Q9Y3S2 320 aaPredicted RBP20.42■□□□□ 0.86
SIPA1-209ENST00000534313 PTGS1P23219 599 aa20.41■□□□□ 0.86
SIPA1-209ENST00000534313 SCRN1Q12765 414 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms