RNA–Protein interactions for RNA: ENST00000534295.1

SCUBE2-213, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-213ENST00000534295 TRAF5O00463 557 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 APAF1O14727 1248 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 SLC34A2O95436 690 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 CXCL9Q07325 125 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 PDIA6Q15084 440 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 AOC3Q16853 763 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 HSP90AB3PQ58FF7 597 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 CYP4F22Q6NT55 531 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 BEGAINQ9BUH8 593 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 ZNRF3Q9ULT6 936 aa16.25■□□□□ 0.19
SCUBE2-213ENST00000534295 BBOX1O75936 387 aa16.24■□□□□ 0.19
SCUBE2-213ENST00000534295 SAPCD2Q86UD0 394 aa16.24■□□□□ 0.19
SCUBE2-213ENST00000534295 ZC3H15Q8WU90 426 aaKnown RBP16.24■□□□□ 0.19
SCUBE2-213ENST00000534295 CDHR2Q9BYE9 1310 aa16.23■□□□□ 0.19
SCUBE2-213ENST00000534295 CA12O43570 354 aa16.23■□□□□ 0.19
SCUBE2-213ENST00000534295 ANXA1P04083 346 aa16.23■□□□□ 0.19
SCUBE2-213ENST00000534295 AIMP1Q12904 312 aaKnown RBP16.23■□□□□ 0.19
SCUBE2-213ENST00000534295 GRM1Q13255 1194 aa16.23■□□□□ 0.19
SCUBE2-213ENST00000534295 DPP8Q6V1X1 898 aaPredicted RBP16.23■□□□□ 0.19
SCUBE2-213ENST00000534295 SP8Q8IXZ3 490 aa16.23■□□□□ 0.19
SCUBE2-213ENST00000534295 ABCC4O15439 1325 aa16.22■□□□□ 0.19
SCUBE2-213ENST00000534295 KIAA2012Q0VF49 1180 aa16.22■□□□□ 0.19
SCUBE2-213ENST00000534295 DDX46Q7L014 1031 aaKnown RBP16.22■□□□□ 0.19
SCUBE2-213ENST00000534295 COPS6Q7L5N1 327 aa16.22■□□□□ 0.19
SCUBE2-213ENST00000534295 MPNDQ8N594 471 aa16.22■□□□□ 0.19
SCUBE2-213ENST00000534295 HCLS1P14317 486 aaPredicted RBP16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 GMPSP49915 693 aaPredicted RBP16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 PROSER3Q2NL68 480 aa16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 FAM161AQ3B820 660 aa16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 NLRP10Q86W26 655 aa16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 XAGE3Q8WTP9 111 aa16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 NECTIN2Q92692 538 aa16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 TRMT112Q9UI30 125 aaKnown RBP16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
SCUBE2-213ENST00000534295 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.18
SCUBE2-213ENST00000534295 HIRAP54198 1017 aaPredicted RBP16.2■□□□□ 0.18
SCUBE2-213ENST00000534295 CALD1Q05682 793 aaKnown RBP16.2■□□□□ 0.18
SCUBE2-213ENST00000534295 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
SCUBE2-213ENST00000534295 TNIP1Q15025 636 aa16.2■□□□□ 0.18
SCUBE2-213ENST00000534295 CIAPIN1Q6FI81 312 aa16.2■□□□□ 0.18
SCUBE2-213ENST00000534295 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
SCUBE2-213ENST00000534295 LAMB2P55268 1798 aa16.19■□□□□ 0.18
SCUBE2-213ENST00000534295 AOC2O75106 756 aa16.19■□□□□ 0.18
SCUBE2-213ENST00000534295 CELF2O95319 508 aaKnown RBP16.19■□□□□ 0.18
SCUBE2-213ENST00000534295 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
SCUBE2-213ENST00000534295 GLIS2Q9BZE0 524 aaPredicted RBP16.19■□□□□ 0.18
SCUBE2-213ENST00000534295 GRAPQ13588 217 aa16.18■□□□□ 0.18
SCUBE2-213ENST00000534295 NEUROD2Q15784 382 aa16.18■□□□□ 0.18
SCUBE2-213ENST00000534295 CDC37L1Q7L3B6 337 aa16.18■□□□□ 0.18
SCUBE2-213ENST00000534295 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
SCUBE2-213ENST00000534295 GRAPLQ8TC17 118 aaPredicted RBP16.18■□□□□ 0.18
SCUBE2-213ENST00000534295 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
SCUBE2-213ENST00000534295 IL16Q14005 1332 aa16.18■□□□□ 0.18
SCUBE2-213ENST00000534295 ZNF521Q96K83 1311 aa16.18■□□□□ 0.18
SCUBE2-213ENST00000534295 CACNA1FO60840 1977 aa16.17■□□□□ 0.18
SCUBE2-213ENST00000534295 RAD17O75943 681 aa16.17■□□□□ 0.18
SCUBE2-213ENST00000534295 MLLT1Q03111 559 aaPredicted RBP16.17■□□□□ 0.18
SCUBE2-213ENST00000534295 WWC1Q8IX03 1113 aa16.17■□□□□ 0.18
SCUBE2-213ENST00000534295 TAF1P21675 1872 aa16.16■□□□□ 0.18
SCUBE2-213ENST00000534295 CCDC85CA6NKD9 419 aa16.16■□□□□ 0.18
SCUBE2-213ENST00000534295 YDJCA8MPS7 323 aa16.16■□□□□ 0.18
SCUBE2-213ENST00000534295 H7C1D1 291 aa16.16■□□□□ 0.18
SCUBE2-213ENST00000534295 WDR63Q8IWG1 891 aa16.16■□□□□ 0.18
SCUBE2-213ENST00000534295 DPF2Q92785 391 aa16.16■□□□□ 0.18
SCUBE2-213ENST00000534295 CNOT7Q9UIV1 285 aaKnown RBP16.16■□□□□ 0.18
SCUBE2-213ENST00000534295 NOGQ13253 232 aa16.15■□□□□ 0.18
SCUBE2-213ENST00000534295 TRPM4Q8TD43 1214 aa16.15■□□□□ 0.18
SCUBE2-213ENST00000534295 ZNF408Q9H9D4 720 aa16.15■□□□□ 0.18
SCUBE2-213ENST00000534295 TSKSQ9UJT2 592 aa16.15■□□□□ 0.18
SCUBE2-213ENST00000534295 CHL1O00533 1208 aa16.14■□□□□ 0.17
SCUBE2-213ENST00000534295 HDGFL1Q5TGJ6 251 aa16.14■□□□□ 0.17
SCUBE2-213ENST00000534295 ANKRD13DQ6ZTN6 518 aa16.14■□□□□ 0.17
SCUBE2-213ENST00000534295 MCOLN1Q9GZU1 580 aa16.14■□□□□ 0.17
SCUBE2-213ENST00000534295 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
SCUBE2-213ENST00000534295 KRT24Q2M2I5 525 aa16.13■□□□□ 0.17
SCUBE2-213ENST00000534295 WASHC4Q2M389 1173 aa16.13■□□□□ 0.17
SCUBE2-213ENST00000534295 PLBD2Q8NHP8 589 aa16.13■□□□□ 0.17
SCUBE2-213ENST00000534295 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
SCUBE2-213ENST00000534295 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
SCUBE2-213ENST00000534295 IFT57Q9NWB7 429 aa16.13■□□□□ 0.17
SCUBE2-213ENST00000534295 NSFL1CQ9UNZ2 370 aaKnown RBP16.13■□□□□ 0.17
SCUBE2-213ENST00000534295 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
SCUBE2-213ENST00000534295 HOXB7P09629 217 aa16.12■□□□□ 0.17
SCUBE2-213ENST00000534295 ZNF853P0CG23 659 aa16.12■□□□□ 0.17
SCUBE2-213ENST00000534295 GNAI1P63096 354 aa16.12■□□□□ 0.17
SCUBE2-213ENST00000534295 SF3B3Q15393 1217 aaKnown RBP16.12■□□□□ 0.17
SCUBE2-213ENST00000534295 MICALL2Q8IY33 904 aa16.12■□□□□ 0.17
SCUBE2-213ENST00000534295 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
SCUBE2-213ENST00000534295 DBF4Q9UBU7 674 aaPredicted RBP16.12■□□□□ 0.17
SCUBE2-213ENST00000534295 SHTN1A0MZ66 631 aa16.11■□□□□ 0.17
SCUBE2-213ENST00000534295 FAM155AB1AL88 458 aaPredicted RBP16.11■□□□□ 0.17
SCUBE2-213ENST00000534295 C6orf229H3BNL8 230 aa16.11■□□□□ 0.17
SCUBE2-213ENST00000534295 HNRNPUQ00839 825 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCUBE2-213ENST00000534295 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
SCUBE2-213ENST00000534295 ZIC5Q96T25 663 aa16.11■□□□□ 0.17
SCUBE2-213ENST00000534295 HYPKQ9NX55 129 aa16.11■□□□□ 0.17
SCUBE2-213ENST00000534295 DUOX1Q9NRD9 1551 aa16.11■□□□□ 0.17
SCUBE2-213ENST00000534295 POLR2AP24928 1970 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms