RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 RAD17O75943 681 aa16.48■□□□□ 0.23
SVIP-205ENST00000533774 CDC37L1Q7L3B6 337 aa16.48■□□□□ 0.23
SVIP-205ENST00000533774 RTFDC1Q9BY42 306 aaPredicted RBP16.48■□□□□ 0.23
SVIP-205ENST00000533774 ATP6V0A2Q9Y487 856 aa16.48■□□□□ 0.23
SVIP-205ENST00000533774 YDJCA8MPS7 323 aa16.47■□□□□ 0.23
SVIP-205ENST00000533774 PRPF38BQ5VTL8 546 aaKnown RBP16.47■□□□□ 0.23
SVIP-205ENST00000533774 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
SVIP-205ENST00000533774 ZC3H15Q8WU90 426 aaKnown RBP16.47■□□□□ 0.23
SVIP-205ENST00000533774 DUOX1Q9NRD9 1551 aa16.47■□□□□ 0.23
SVIP-205ENST00000533774 VPS33BQ9H267 617 aa16.46■□□□□ 0.23
SVIP-205ENST00000533774 ZBTB3Q9H5J0 574 aa16.46■□□□□ 0.23
SVIP-205ENST00000533774 RNF186Q9NXI6 227 aa16.46■□□□□ 0.23
SVIP-205ENST00000533774 CNOT7Q9UIV1 285 aaKnown RBP16.46■□□□□ 0.23
SVIP-205ENST00000533774 ABCC4O15439 1325 aa16.45■□□□□ 0.22
SVIP-205ENST00000533774 TRPA1O75762 1119 aa16.45■□□□□ 0.22
SVIP-205ENST00000533774 EGFRP00533 1210 aa16.45■□□□□ 0.22
SVIP-205ENST00000533774 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
SVIP-205ENST00000533774 RGMBQ6NW40 437 aa16.45■□□□□ 0.22
SVIP-205ENST00000533774 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
SVIP-205ENST00000533774 RRP7AQ9Y3A4 280 aaKnown RBP16.45■□□□□ 0.22
SVIP-205ENST00000533774 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
SVIP-205ENST00000533774 KIAA2012Q0VF49 1180 aa16.44■□□□□ 0.22
SVIP-205ENST00000533774 SAGE1Q9NXZ1 904 aa16.44■□□□□ 0.22
SVIP-205ENST00000533774 LRRC37AA6NMS7 1700 aa16.44■□□□□ 0.22
SVIP-205ENST00000533774 SCN9AQ15858 1988 aa16.44■□□□□ 0.22
SVIP-205ENST00000533774 MYL6BP14649 208 aa16.43■□□□□ 0.22
SVIP-205ENST00000533774 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
SVIP-205ENST00000533774 SAMD7Q7Z3H4 446 aa16.43■□□□□ 0.22
SVIP-205ENST00000533774 MICALL2Q8IY33 904 aa16.43■□□□□ 0.22
SVIP-205ENST00000533774 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
SVIP-205ENST00000533774 ZBTB12Q9Y330 459 aaPredicted RBP16.43■□□□□ 0.22
SVIP-205ENST00000533774 ADM5C9JUS6 153 aa16.42■□□□□ 0.22
SVIP-205ENST00000533774 KIF6Q6ZMV9 814 aa16.42■□□□□ 0.22
SVIP-205ENST00000533774 CSRNP1Q96S65 589 aa16.42■□□□□ 0.22
SVIP-205ENST00000533774 GBA2Q9HCG7 927 aaPredicted RBP16.42■□□□□ 0.22
SVIP-205ENST00000533774 COL4A1P02462 1669 aa16.41■□□□□ 0.22
SVIP-205ENST00000533774 TNIP1Q15025 636 aa16.41■□□□□ 0.22
SVIP-205ENST00000533774 SLC10A5Q5PT55 438 aa16.41■□□□□ 0.22
SVIP-205ENST00000533774 DPP8Q6V1X1 898 aaPredicted RBP16.41■□□□□ 0.22
SVIP-205ENST00000533774 GIGYF2Q6Y7W6 1299 aaKnown RBP16.41■□□□□ 0.22
SVIP-205ENST00000533774 SP8Q8IXZ3 490 aa16.41■□□□□ 0.22
SVIP-205ENST00000533774 MPNDQ8N594 471 aa16.41■□□□□ 0.22
SVIP-205ENST00000533774 SUPT20HQ8NEM7 779 aa16.41■□□□□ 0.22
SVIP-205ENST00000533774 NLRP3Q96P20 1036 aa16.41■□□□□ 0.22
SVIP-205ENST00000533774 TBC1D10BQ4KMP7 808 aaPredicted RBP16.4■□□□□ 0.22
SVIP-205ENST00000533774 KRT26Q7Z3Y9 468 aa16.4■□□□□ 0.22
SVIP-205ENST00000533774 CTU1Q7Z7A3 348 aaKnown RBP16.4■□□□□ 0.22
SVIP-205ENST00000533774 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
SVIP-205ENST00000533774 H7C1D1 291 aa16.39■□□□□ 0.21
SVIP-205ENST00000533774 PSMD14O00487 310 aa16.39■□□□□ 0.21
SVIP-205ENST00000533774 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
SVIP-205ENST00000533774 SLC10A3P09131 477 aa16.39■□□□□ 0.21
SVIP-205ENST00000533774 ZNF157P51786 506 aaPredicted RBP16.39■□□□□ 0.21
SVIP-205ENST00000533774 EIF4A1P60842 406 aaKnown RBP16.39■□□□□ 0.21
SVIP-205ENST00000533774 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
SVIP-205ENST00000533774 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
SVIP-205ENST00000533774 HPS5Q9UPZ3 1129 aa16.39■□□□□ 0.21
SVIP-205ENST00000533774 CLSPNQ9HAW4 1339 aa16.39■□□□□ 0.21
SVIP-205ENST00000533774 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
SVIP-205ENST00000533774 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
SVIP-205ENST00000533774 PPP1R42Q7Z4L9 355 aa16.38■□□□□ 0.21
SVIP-205ENST00000533774 C2orf69Q8N8R5 385 aa16.38■□□□□ 0.21
SVIP-205ENST00000533774 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
SVIP-205ENST00000533774 THUMPD2Q9BTF0 503 aaKnown RBP16.38■□□□□ 0.21
SVIP-205ENST00000533774 KCNQ5Q9NR82 932 aa16.38■□□□□ 0.21
SVIP-205ENST00000533774 ASTN2O75129 1339 aaPredicted RBP16.38■□□□□ 0.21
SVIP-205ENST00000533774 BBOX1O75936 387 aa16.37■□□□□ 0.21
SVIP-205ENST00000533774 HCLS1P14317 486 aaPredicted RBP16.37■□□□□ 0.21
SVIP-205ENST00000533774 DPF2Q92785 391 aa16.37■□□□□ 0.21
SVIP-205ENST00000533774 UTP14AQ9BVJ6 771 aaKnown RBP16.37■□□□□ 0.21
SVIP-205ENST00000533774 TMX4Q9H1E5 349 aaPredicted RBP16.37■□□□□ 0.21
SVIP-205ENST00000533774 TRIM26Q12899 539 aaPredicted RBP16.36■□□□□ 0.21
SVIP-205ENST00000533774 PARP10Q53GL7 1025 aa16.36■□□□□ 0.21
SVIP-205ENST00000533774 RBM26Q5T8P6 1007 aaKnown RBP16.36■□□□□ 0.21
SVIP-205ENST00000533774 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
SVIP-205ENST00000533774 RTL9Q8NET4 1388 aa16.36■□□□□ 0.21
SVIP-205ENST00000533774 PSME4Q14997 1843 aa16.35■□□□□ 0.21
SVIP-205ENST00000533774 MKI67P46013 3256 aaKnown RBP16.35■□□□□ 0.21
SVIP-205ENST00000533774 PDIA6Q15084 440 aa16.35■□□□□ 0.21
SVIP-205ENST00000533774 PROSER3Q2NL68 480 aa16.35■□□□□ 0.21
SVIP-205ENST00000533774 DBNDD1Q9H9R9 158 aa16.35■□□□□ 0.21
SVIP-205ENST00000533774 ANXA1P04083 346 aa16.34■□□□□ 0.21
SVIP-205ENST00000533774 GRAPQ13588 217 aa16.34■□□□□ 0.21
SVIP-205ENST00000533774 RASAL3Q86YV0 1011 aa16.34■□□□□ 0.21
SVIP-205ENST00000533774 GRAPLQ8TC17 118 aaPredicted RBP16.34■□□□□ 0.21
SVIP-205ENST00000533774 ZNF428Q96B54 188 aa16.33■□□□□ 0.2
SVIP-205ENST00000533774 DCPSQ96C86 337 aaKnown RBP16.33■□□□□ 0.2
SVIP-205ENST00000533774 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
SVIP-205ENST00000533774 NUDCQ9Y266 331 aa16.33■□□□□ 0.2
SVIP-205ENST00000533774 RIMBP2O15034 1052 aa16.32■□□□□ 0.2
SVIP-205ENST00000533774 NLRP10Q86W26 655 aa16.32■□□□□ 0.2
SVIP-205ENST00000533774 CDCA5Q96FF9 252 aa16.32■□□□□ 0.2
SVIP-205ENST00000533774 PAPPA2Q9BXP8 1791 aa16.32■□□□□ 0.2
SVIP-205ENST00000533774 POLLQ9UGP5 575 aa16.32■□□□□ 0.2
SVIP-205ENST00000533774 DOK7Q18PE1 504 aa16.31■□□□□ 0.2
SVIP-205ENST00000533774 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
SVIP-205ENST00000533774 ZNF296Q8WUU4 475 aaPredicted RBP16.31■□□□□ 0.2
SVIP-205ENST00000533774 GGA3Q9NZ52 723 aa16.31■□□□□ 0.2
SVIP-205ENST00000533774 ERBB4Q15303 1308 aa16.3■□□□□ 0.2
SVIP-205ENST00000533774 ECE2O60344 883 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms