RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 TNIP1Q15025 636 aa13.24□□□□□ -0.29
CHMP4A-206ENST00000533011 C2orf69Q8N8R5 385 aa13.24□□□□□ -0.29
CHMP4A-206ENST00000533011 SNED1Q8TER0 1413 aa13.23□□□□□ -0.29
CHMP4A-206ENST00000533011 BCORQ6W2J9 1755 aa13.23□□□□□ -0.29
CHMP4A-206ENST00000533011 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
CHMP4A-206ENST00000533011 SUPT20HQ8NEM7 779 aa13.23□□□□□ -0.29
CHMP4A-206ENST00000533011 ZIC5Q96T25 663 aa13.23□□□□□ -0.29
CHMP4A-206ENST00000533011 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
CHMP4A-206ENST00000533011 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
CHMP4A-206ENST00000533011 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHMP4A-206ENST00000533011 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
CHMP4A-206ENST00000533011 H7C1D1 291 aa13.22□□□□□ -0.29
CHMP4A-206ENST00000533011 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
CHMP4A-206ENST00000533011 GNAI1P63096 354 aa13.22□□□□□ -0.29
CHMP4A-206ENST00000533011 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
CHMP4A-206ENST00000533011 ZNF853P0CG23 659 aa13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 MYL6BP14649 208 aa13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 CXCL9Q07325 125 aa13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 RBM17Q96I25 401 aaKnown RBP13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 CRAMP1Q96RY5 1269 aa13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 CSRNP1Q96S65 589 aa13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 IFT57Q9NWB7 429 aa13.21□□□□□ -0.29
CHMP4A-206ENST00000533011 PPIP5K2O43314 1243 aa13.2□□□□□ -0.3
CHMP4A-206ENST00000533011 GMPSP49915 693 aaPredicted RBP13.2□□□□□ -0.3
CHMP4A-206ENST00000533011 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
CHMP4A-206ENST00000533011 NGEFQ8N5V2 710 aa13.2□□□□□ -0.3
CHMP4A-206ENST00000533011 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
CHMP4A-206ENST00000533011 HOXB7P09629 217 aa13.19□□□□□ -0.3
CHMP4A-206ENST00000533011 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHMP4A-206ENST00000533011 KRT24Q2M2I5 525 aa13.19□□□□□ -0.3
CHMP4A-206ENST00000533011 FBXO46Q6PJ61 603 aaPredicted RBP13.19□□□□□ -0.3
CHMP4A-206ENST00000533011 KIF6Q6ZMV9 814 aa13.19□□□□□ -0.3
CHMP4A-206ENST00000533011 USP48Q86UV5 1035 aa13.19□□□□□ -0.3
CHMP4A-206ENST00000533011 WWC1Q8IX03 1113 aa13.19□□□□□ -0.3
CHMP4A-206ENST00000533011 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
CHMP4A-206ENST00000533011 CNOT7Q9UIV1 285 aaKnown RBP13.19□□□□□ -0.3
CHMP4A-206ENST00000533011 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
CHMP4A-206ENST00000533011 SLC10A3P09131 477 aa13.18□□□□□ -0.3
CHMP4A-206ENST00000533011 HIRAP54198 1017 aaPredicted RBP13.18□□□□□ -0.3
CHMP4A-206ENST00000533011 PDIA6Q15084 440 aa13.18□□□□□ -0.3
CHMP4A-206ENST00000533011 INTS3Q68E01 1043 aaKnown RBP13.18□□□□□ -0.3
CHMP4A-206ENST00000533011 COL4A5P29400 1685 aa13.18□□□□□ -0.3
CHMP4A-206ENST00000533011 AKAP11Q9UKA4 1901 aa13.17□□□□□ -0.3
CHMP4A-206ENST00000533011 MAP3K15Q6ZN16 1313 aa13.17□□□□□ -0.3
CHMP4A-206ENST00000533011 HLFQ16534 295 aa13.17□□□□□ -0.3
CHMP4A-206ENST00000533011 DUSP27Q5VZP5 1158 aa13.17□□□□□ -0.3
CHMP4A-206ENST00000533011 TTLL7Q6ZT98 887 aa13.17□□□□□ -0.3
CHMP4A-206ENST00000533011 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
CHMP4A-206ENST00000533011 DPF2Q92785 391 aa13.17□□□□□ -0.3
CHMP4A-206ENST00000533011 RTFDC1Q9BY42 306 aaPredicted RBP13.17□□□□□ -0.3
CHMP4A-206ENST00000533011 PPEF1O14829 653 aaPredicted RBP13.16□□□□□ -0.3
CHMP4A-206ENST00000533011 AOC3Q16853 763 aa13.16□□□□□ -0.3
CHMP4A-206ENST00000533011 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
CHMP4A-206ENST00000533011 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
CHMP4A-206ENST00000533011 KRT26Q7Z3Y9 468 aa13.16□□□□□ -0.3
CHMP4A-206ENST00000533011 LRP10Q7Z4F1 713 aa13.16□□□□□ -0.3
CHMP4A-206ENST00000533011 DCPSQ96C86 337 aaKnown RBP13.16□□□□□ -0.3
CHMP4A-206ENST00000533011 ATP6V0A2Q9Y487 856 aa13.16□□□□□ -0.3
CHMP4A-206ENST00000533011 NUP98P52948 1817 aa13.16□□□□□ -0.3
CHMP4A-206ENST00000533011 IL16Q14005 1332 aa13.15□□□□□ -0.3
CHMP4A-206ENST00000533011 RIC1Q4ADV7 1423 aa13.15□□□□□ -0.3
CHMP4A-206ENST00000533011 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
CHMP4A-206ENST00000533011 ANXA1P04083 346 aa13.15□□□□□ -0.3
CHMP4A-206ENST00000533011 FKBP1BP68106 108 aa13.15□□□□□ -0.3
CHMP4A-206ENST00000533011 ZBTB3Q9H5J0 574 aa13.15□□□□□ -0.3
CHMP4A-206ENST00000533011 DBF4Q9UBU7 674 aaPredicted RBP13.15□□□□□ -0.3
CHMP4A-206ENST00000533011 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 DLL1O00548 723 aa13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 KIAA2012Q0VF49 1180 aa13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 GIGYF2Q6Y7W6 1299 aaKnown RBP13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 WDR63Q8IWG1 891 aa13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 SALL2Q9Y467 1007 aaPredicted RBP13.14□□□□□ -0.31
CHMP4A-206ENST00000533011 BBOX1O75936 387 aa13.13□□□□□ -0.31
CHMP4A-206ENST00000533011 AIMP1Q12904 312 aaKnown RBP13.13□□□□□ -0.31
CHMP4A-206ENST00000533011 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
CHMP4A-206ENST00000533011 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
CHMP4A-206ENST00000533011 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
CHMP4A-206ENST00000533011 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
CHMP4A-206ENST00000533011 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
CHMP4A-206ENST00000533011 RPS12P25398 132 aaKnown RBP13.12□□□□□ -0.31
CHMP4A-206ENST00000533011 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
CHMP4A-206ENST00000533011 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
CHMP4A-206ENST00000533011 ZNF34Q8IZ26 560 aa13.12□□□□□ -0.31
CHMP4A-206ENST00000533011 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
CHMP4A-206ENST00000533011 NLRP3Q96P20 1036 aa13.12□□□□□ -0.31
CHMP4A-206ENST00000533011 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
CHMP4A-206ENST00000533011 GPR25O00155 361 aa13.11□□□□□ -0.31
CHMP4A-206ENST00000533011 RAD17O75943 681 aa13.11□□□□□ -0.31
CHMP4A-206ENST00000533011 GPTP24298 496 aa13.11□□□□□ -0.31
CHMP4A-206ENST00000533011 HSP90AB3PQ58FF7 597 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms