RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 FAM9BQ8IZU0 186 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 EPAS1Q99814 870 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 SYT17Q9BSW7 474 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 SRP68Q9UHB9 627 aaKnown RBP7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 SIPA1L3O60292 1781 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 TUBGCP6Q96RT7 1819 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 UBR3Q6ZT12 1888 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 COL15A1P39059 1388 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 UBR2Q8IWV8 1755 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 SENP3-EIF4A1A0A087X0R7 540 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 CHL1O00533 1208 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 MAP3K7O43318 606 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 MYSM1Q5VVJ2 828 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 USPL1Q5W0Q7 1092 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 VRTNQ9H8Y1 702 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 CDHR5Q9HBB8 845 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 IGSF5Q9NSI5 407 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 NARFQ9UHQ1 456 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 SRCAPQ6ZRS2 3230 aa7.49□□□□□ -1.21
HMGB1P42-201ENST00000532126 PIP4K2AP48426 406 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P42-201ENST00000532126 ASTLQ6HA08 431 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P42-201ENST00000532126 PTCD2Q8WV60 388 aaKnown RBP7.48□□□□□ -1.21
HMGB1P42-201ENST00000532126 NPDC1Q9NQX5 325 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P42-201ENST00000532126 TBC1D2BQ9UPU7 963 aa7.48□□□□□ -1.21
HMGB1P42-201ENST00000532126 CD2APQ9Y5K6 639 aa7.48□□□□□ -1.21
HMGB1P42-201ENST00000532126 PARP3Q9Y6F1 533 aa7.48□□□□□ -1.21
HMGB1P42-201ENST00000532126 VIRMAQ69YN4 1812 aaKnown RBP7.48□□□□□ -1.21
HMGB1P42-201ENST00000532126 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 NBPF26B4DH59 902 aa7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 GNAI1P63096 354 aa7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 PPP2R2DQ66LE6 453 aa7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 DIEXFQ68CQ4 756 aaKnown RBP7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 NBPF10Q6P3W6 841 aaKnown RBP7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 DZIP3Q86Y13 1208 aaKnown RBP7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 NBPF15Q8N660 670 aa7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 MBIPQ9NS73 344 aa7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 IFT57Q9NWB7 429 aa7.47□□□□□ -1.21
HMGB1P42-201ENST00000532126 DLG5Q8TDM6 1919 aa7.46□□□□□ -1.21
HMGB1P42-201ENST00000532126 UNCXA6NJT0 531 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 CCER2I3L3R5 266 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 ZNF853P0CG23 659 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 MYL6BP14649 208 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 EIF2S2P20042 333 aaKnown RBP7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 TM4SF1P30408 202 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 DDR1Q08345 913 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 NFIXQ14938 502 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 NGEFQ8N5V2 710 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 NLGN2Q8NFZ4 835 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 BCL2L12Q9HB09 334 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 GNEQ9Y223 722 aaKnown RBP7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 SALL2Q9Y467 1007 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 COL24A1Q17RW2 1714 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 ERBB4Q15303 1308 aa7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 MYH14Q7Z406 1995 aaKnown RBP7.46□□□□□ -1.22
HMGB1P42-201ENST00000532126 POM121CA8CG34 1229 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 POLRMTO00411 1230 aaKnown RBP7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 CAMTA2O94983 1202 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 HOXB7P09629 217 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 RFX1P22670 979 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 KRT24Q2M2I5 525 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 BICDL1Q6ZP65 573 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 MTMR14Q8NCE2 650 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 PHOX2BQ99453 314 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 FAM217BQ9NTX9 383 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 ZNF652Q9Y2D9 606 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 KDM3BQ7LBC6 1761 aa7.45□□□□□ -1.22
HMGB1P42-201ENST00000532126 C4AP0C0L4 1744 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 SEC24BO95487 1268 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 SERPINB2P05120 415 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 TGFB2P61812 414 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 GPR162Q16538 588 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 WASHC4Q2M389 1173 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 HDGFL1Q5TGJ6 251 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 DUSP27Q5VZP5 1158 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 TBC1D9BQ66K14 1250 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 CLEC4GQ6UXB4 293 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 KIF6Q6ZMV9 814 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 WDR63Q8IWG1 891 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 SETDB2Q96T68 719 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 IL16Q14005 1332 aa7.44□□□□□ -1.22
HMGB1P42-201ENST00000532126 ERVV-1B6SEH8 477 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 ELL2O00472 640 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 NPHP1O15259 732 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 SLC34A2O95436 690 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 OATP04181 439 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 PROSER3Q2NL68 480 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 SLAIN1Q8ND83 568 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 TSR2Q969E8 191 aaKnown RBP7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 DRC1Q96MC2 740 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 ZBTB3Q9H5J0 574 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 CHPF2Q9P2E5 772 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 MAP3K15Q6ZN16 1313 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 CARMIL3Q8ND23 1372 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 C10orf71Q711Q0 1435 aa7.43□□□□□ -1.22
HMGB1P42-201ENST00000532126 A0A0G2JLW4 131 aa7.42□□□□□ -1.22
HMGB1P42-201ENST00000532126 GABBR2O75899 941 aa7.42□□□□□ -1.22
HMGB1P42-201ENST00000532126 ANXA1P04083 346 aa7.42□□□□□ -1.22
HMGB1P42-201ENST00000532126 NCLP19338 710 aaKnown RBP7.42□□□□□ -1.22
HMGB1P42-201ENST00000532126 AIMP1Q12904 312 aaKnown RBP7.42□□□□□ -1.22
HMGB1P42-201ENST00000532126 HLFQ16534 295 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms